Publications

  • Petersen, J. D., Lu, J., Fitzgerald, W., Zhou, F., Blank, P. S., Matthies, D., & Zimmerberg, J. (2022). Unique aggregation of retroviral particles pseudotyped with the Delta variant SARS-CoV-2 spike protein. Viruses, 14(1024). https://doi.org/10.3390/v14051024 external link
  • Wasmuth, E. V., Broeck, A. V., LaClair, J. R., Hoover, E. A., Lawrence, K. E., Paknejad, N., Pappas, K., Matthies, D., Wang, B., Feng, W., Watson, P. A., Zinder, J. C., Karthaus, W. R., de la Cruz, M. J., Hite, R. K., Manova-Todorova, K., Yu, Z., Weintraub, S. T., Klinge, S., & Sawyers, C. L. (2022). Allosteric interactions prime androgen receptor dimerization and activation. Molecular Cell, S1097-2765(22)00291-X. Online ahead of print. PMID: 35447082
  • Qiu, B., Matthies, D., Fortea, E., Yu, Z., & Boudker, O. (2021). Cryo-EM structures of excitatory amino acid transporter 3 visualize coupled substrate, sodium, and proton binding and transport. Science Advances, 7(10), eabf5814. PMID: 33658209
  • Qiu, B., Matthies, D., Fortea, E., Yu, Z., & Boudker, O. (2020). Transport mechanism of the neuronal excitatory amino acid transporter bioRxiv, June 2. https://doi.org/10.1101/2020.06.01.127704. external link
  • He, S., Chou, H. T., Matthies, D., Wunder, T., Meyer, M. T., Atkinson, N., Martinez-Sanchez, A., Jeffrey, P. D., Port, S. A., Patena, W., He, G., Chen, V. K., Hughson, F. M., McCormick, A. J., Mueller-Cajar, O., Engel, B. D., Yu, Z., & Jonikas, M. C. (2020). The structural basis of Rubisco phase separation in the pyrenoid. Nature Plants, 6(12), 1480–1490. PMID: 33230314
  • Matthies, D., Lee, N., Gatera, I., Pasolli, H. A., Zhao, X., Liu, H., Walpita, D., Liu, Z., Yu, Z., & Ioannou, M. S. (2020). Microdomains form on the luminal face of neuronal extracellular vesicle membranes. Scientific Reports, 10(1), 11953. PMID: 32686698
  • Ioannou, M. S., Jackson, J., Sheu, S. H., Chang, C. L., Weigel, A. V., Liu, H., Pasolli, H. A., Xu, C. S., Pang, S., Matthies, D., Hess, H. F., Lippincott-Schwartz, J., & Liu, Z. (2019). Neuron-astrocyte metabolic coupling protects against activity-induced fatty acid toxicity. Cell, 177(6), 1522–1535.e14. PMID: 31130380
  • Matthies, D., Bae, C., Toombes, G. E., Fox, T., Bartesaghi, A., Subramaniam, S., & Swartz, K. J. (2018). Single-particle cryo-EM structure of a voltage-activated potassium channel in lipid nanodiscs. eLife, 7, e37558. PMID: 30109985
  • Puppala, A. K., French, R. L., Matthies, D., Baxa, U., Subramaniam, S., & Simonović, M. (2016). Structural basis for early-onset neurological disorders caused by mutations in human selenocysteine synthase. Scientific Reports, 6, 32563. 27576344
  • Borgnia, M. J., Banerjee, S., Merk, A., Matthies, D., Bartesaghi, A., Rao, P., Pierson, J., Earl, L. A., Falconieri, V., Subramaniam, S., & Milne, J. L. (2016). Using cryo-EM to map small ligands on dynamic metabolic enzymes: Studies with glutamate dehydrogenase. Molecular Pharmacology, 89(6), 645–651. 27036132
  • Matthies, D., Dalmas, O., Borgnia, M. J., Dominik, P. K., Merk, A., Rao, P., Reddy, B. G., Islam, S., Bartesaghi, A., Perozo, E., & Subramaniam, S. (2016). Cryo-EM structures of the magnesium channel CorA reveal symmetry break upon gating. Cell, 164(4), 747–756. PMID: 26871634
  • Ognjenović, J., Wu, J., Matthies, D., Baxa, U., Subramaniam, S., Ling, J., & Simonović, M. (2016). The crystal structure of human GlnRS provides basis for the development of neurological disorders. Nucleic Acids Research, 44(7), 3420–3431. PMID: 26869582
  • Bartesaghi, A., Merk, A., Banerjee, S., Matthies, D., Wu, X., Milne, J. L., & Subramaniam, S. (2015). 2.2 Å resolution cryo-EM structure of β-galactosidase in complex with a cell-permeant inhibitor. Science (New York, N.Y.), 348(6239), 1147–1151. PMID: 25953817
  • Matthies, D., Zhou, W., Klyszejko, A. L., Anselmi, C., Yildiz, Ö., Brandt, K., Müller, V., Faraldo-Gómez, J. D., & Meier, T. (2014). High-resolution structure and mechanism of an F/V-hybrid rotor ring in a Na⁺-coupled ATP synthase. Nature Communications, 5, 5286. PMID: 25381992
  • Bartesaghi, A., Matthies, D., Banerjee, S., Merk, A., & Subramaniam, S. (2014). Structure of β-galactosidase at 3.2-Å resolution obtained by cryo-electron microscopy. Proceedings of the National Academy of Sciences of the United States of America, 111(32), 11709–11714. PMID: 25071206
  • Schulz, S., Iglesias-Cans, M., Krah, A., Yildiz, O., Leone, V., Matthies, D., Cook, G. M., Faraldo-Gómez, J. D., & Meier, T. (2013). A new type of Na(+)-driven ATP synthase membrane rotor with a two-carboxylate ion-coupling motif. PLoS Biology, 11(6), e1001596. PMID: 23824040
  • Hammann, E., Zappe, A., Keis, S., Ernst, S., Matthies, D., Meier, T., Cook, G. M., & Börsch, M. (2012). Step size of the rotary proton motor in single FoF1-ATP synthase from a thermoalkaliphilic bacterium by DCO-ALEX FRET. Proceedings of the SPIE – The International Society for Optical Engineering, 8228-82280A. https://doi.org/10.1117/12.907242 external link
  • Matthies, D., Haberstock, S., Joos, F., Dötsch, V., Vonck, J., Bernhard, F., & Meier, T. (2011). Cell-free expression and assembly of ATP synthase. Journal of Molecular Biology, 413(3), 593–603. PMID: 21925509
  • Kalamorz, F., Keis, S., McMillan, D. G., Olsson, K., Stanton, J. A., Stockwell, P., Black, M. A., Klingeman, D. M., Land, M. L., Han, C. S., Martin, S. L., Becher, S. A., Peddie, C. J., Morgan, H. W., Matthies, D., Preiss, L., Meier, T., Brown, S. D., & Cook, G. M. (2011). Draft genome sequence of the thermoalkaliphilic Caldalkalibacillus thermarum strain TA2.A1. Journal of Bacteriology, 193(16), 4290–4291. PMID: 21685297
  • Matthies, D., Preiss, L., Klyszejko, A. L., Muller, D. J., Cook, G. M., Vonck, J., & Meier, T. (2009). The c13 ring from a thermoalkaliphilic ATP synthase reveals an extended diameter due to a special structural region. Journal of Molecular Biology, 388(3), 611–618. PMID: 19327366
  • Meier, T., Morgner, N., Matthies, D., Pogoryelov, D., Keis, S., Cook, G. M., Dimroth, P., & Brutschy, B. (2007). A tridecameric c ring of the adenosine triphosphate (ATP) synthase from the thermoalkaliphilic Bacillus sp. strain TA2.A1 facilitates ATP synthesis at low electrochemical proton potential. Molecular Microbiology, 65(5), 1181–1192. PMID: 17645441
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