Datasets from Transcriptional Heterogeneity of ventricular zone cell in the ganglionic eminences of the mouse forebrain (Lee DR et al., eLife 2022):

GSE167013 → scRNA-seq of E12.5 WT MGE, LGE, CGE and cortex (1 replicate each)
GSE190593 → scRNA-seq of E12.5 Nes-dVenus MGE, LGE, CGE (2 replicates each) and cortex (1 replicate),
scRNA-seq of E14.5 Nes-dVenus MGE, LGE and CGE (1 replicate), and
scRNA-seq of E14.5 WT MGE, LGE and CGE (1 replicate)

Datasets from An epigenome atlas of neural progenitors within the embryonic mouse forebrain (Rhodes CJ et al., bioRxiv 2021):

** All of the data described in this manuscript is publicly available in a searchable format on the UCSC Genome Browser and can be found at this link:  Embryonic Mouse Brain Epigenome Atlas **

GSE167013 → scRNA-seq of E12.5 WT MGE, LGE, CGE and cortex (1 replicate each)
GSE167016 → snRNA-seq of P30 Dlx6aCre;Sun1-GFP cortex and hippocampus (1 replicate each)
GSE167047 → snATAC-seq of E12.5 WT MGE, LGE, CGE and cortex (2 replicates each)
GSE167048 → snATAC-seq of P30 Dlx6aCre;Sunq-GFP cortex and hippocampus (2 replicates each)
GSE167050 → ALL of the above RNA-seq and ATAC-Seq files (GSE167013, 167016, 167047, 167048)
GSE201487 → H3K4me3 CUT&Tag of E12.5 WT MGE, LGE, CGE and cortex (2 replicates each)
GSE201488 → H3K27me3 CUT&Tag of E12.5 WT MGE, LGE, CGE and cortex (2 replicates each)
GSE201400 → H3K27ac CUT&RUN of E12.5 WT MGE, LGE, CGE and cortex (2 replicates each)
GSE201494 → ALL of the above Cut&Tag and CUT&RUN data
GSE201186 → Hi-C of E12.5 WT MGE, LGE, CGE and cortex (2 replicates each)
GSE201317 → Capture-C of E12.5 WT MGE, LGE, CGE and cortex (2 replicates each)