ID p20C8 standard; DNA; FUN; 666 BP. AC p20C8; FH Key Location/Qualifiers FH FT CDS join(752474..752680,752725..753289,753353..754093, FT 754135..754631) FT /colour=7 FT /gene="SPCC14G10.05" FT /gene="SPCC1020.13c" FT /label=SPCC14G10.05 FT /note="SPCC14G10.05, len:669, SIMILARITY:Bos Taurus, FT O46606 , PHOSPHATIDIC ACID-PREFERRING PHOSPHOLIPASE, (875 FT aa)opt: 186, E(): 6.1e-21, (23.2% identity in 651 aa FT overlap)" FT /product="putative phospholipase" FT /fasta_file="fasta/c14G10.tab.seq.04997.out" FT /label=SPCC1020.13c FT /note="SPCC1020.13c, len:>679, FT SIMILARITY:Schizosaccharomyces pombe, P87109, hypothetical FT 85.7 kD protein , (757 aa), fasta scores: opt: 306, FT E():3.6e-12, (24.1% identity in 733 aa)" FT /fasta_file="fasta/c1020.tab.seq.04610.out" FT CDS complement(637461..639533) FT /colour=2 FT /gene="ccr4" FT /gene="SPCC31H12.08c" FT /gene="SPCC5E4.02c" FT /label=ccr4 FT /note="SPCC31H12.08c, len:690, SIMILARITY:Saccharomyces FT cerevisiae, YAL021C, CCR4_YEAST, glucose-repressible FT alcohol dehydrogenase transcriptional effector(carbon FT catabolite repressor protein 4), (837 aa), fasta scores: FT opt: 944, E():0, (36.5" FT /product="putative CCR4-Not complex; similar to S. FT cerevisiae carbon catabolite repressor protein 4" FT /fasta_file="fasta/c31H12.tab.seq.05009.out" FT /note="SPCC5E4.02c, len:690, SIMILARITY:Saccharomyces FT cerevisiae, CCR4_YEAST, glucose-repressible alcohol FT dehydrogenase transcriptional effector (carbon catabolite FT repressor protein 4), (837 aa), fasta scores: opt: 944, FT E():0, (36.5% identity in 589 aa)" FT /fasta_file="fasta/c5E4.tab.seq.05011.out" FT CDS join(105680..105736,105785..107419) FT /colour=7 FT /gene="SPCC613.14" FT /gene="SPCC330.02" FT /label=SPCC613.14 FT /note="SPCC613.14, len:563" FT /product="putative DNA repair protein; putatively involved FT in nucleotide-excision repair; similar to S. cerevisiae FT RAD7" FT /fasta_file="fasta/c613.tab.seq.04958.out" FT /label=SPCC330.02 FT /note="SPCC330.02, len:563, SIMILARITY:Saccharomyces FT cerevi siae, RAD7_YEAST, DNAnucleotide-excision repair FT protein rad 7, (565 aa), fasta scores: opt: 608, E():1.1e- FT 24, (29.5% id entity in 589 aa)" FT /product="putative DNA repair protein; possibly involved FT in nucleotide-excision repair; similar to S. cerevisiae FT RAD7" FT /fasta_file="fasta/c330.tab.seq.04541.out" FT CDS join(741745..741781,741830..742503) FT /colour=10 FT /gene="SPCC18B5.12" FT /gene="SPCC14G10.01" FT /label=SPCC18B5.12 FT /note="SPCC18B5.12, len:236, SIMILARITY:Saccharomyces FT cerevisiae, YD96_YEAST, hypothetical 27.3 kD protein in FT ref2-cbs2 intergenic region., (241 aa), fasta scores: opt: FT 605, E():4.6e-33, (45.8% identity in 216 aa)" FT /product="conserved protein; UPF0038 family" FT /fasta_file="fasta/c18B5.tab.seq.05238.out" FT /gene="SPBC18B5.12" FT /label=SPCC14G10.01 FT /note="SPCC14G10.01, len:236, SIMILARITY:Saccharomyces FT cere visiae, YDR196C, YD96_YEAST, similar to C.elegans FT hypoth etical protein T05G5.5, (241 aa), fasta scores: FT opt: 605, E ():0, (45.8% identity in 216 aa)" FT /fasta_file="fasta/c14G10.tab.seq.04993.out" FT CDS join(591852..591884,591925..592086,592134..592253, FT 592353..592791,592832..594435) FT /colour=2 FT /gene="sec15" FT /gene="SPCC1672.13" FT /gene="SPCC1183.01" FT /label=sec15 FT /note="SPCC1672.13, len:785aa, similarity: R. norvegicus, FT O 54923, rsec15, (822aa), fasta scores, opt:642, E():7.1e- FT 28, (23.7% identity in 796 aa overlap)" FT /product="exocyst subunit; of the final step of the FT secretory pathway" FT /fasta_file="fasta/c1672.tab.seq.04844.out" FT /note="SPCC1183.01, len:785" FT /product="exocyst subunit" FT /fasta_file="fasta/c1183.tab.seq.04845.out" FT CDS 867996..868982 FT /colour=10 FT /gene="SPCC63.15" FT /gene="SPCC16A11.01" FT /label=SPCC63.15 FT /note="SPCC63.15, len:328, SIMILARITY:Saccharomyces FT cerevisiae, YKF1_YEAST, hypothetical 40.5 kD protein, (353 FT aa), fasta scores: opt: 133, E():0.27, (24.5% identity in FT 286 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YKL051W" FT /fasta_file="fasta/c63.tab.seq.04830.out" FT /label=SPCC16A11.01 FT /note="SPCC16A11.01, len:328, SIMILARITY:Saccharomyces FT cerevisiae, YKF1_YEAST, hypothetical 40.5 kD protein, (353 FT aa), fasta scores: opt: 133, E():0.27, (24.5% identity in FT 286 aa)" FT /fasta_file="fasta/c16A11.tab.seq.05251.out" FT CDS complement(139222..140193) FT /colour=7 FT /gene="SPCC330.15c" FT /gene="SPCC320.14" FT /label=SPCC330.15c FT /note="SPCC330.15c, len:323" FT /product="putative serine-threonine dehydratase" FT /fasta_file="fasta/c330.tab.seq.04554.out" FT /label=SPCC320.14 FT /note="SPCC320.14, len:322, SIMILARITY:Saccharomyces FT cerevisiae, YKL218C, YKV8_YEAST, P36007, hypot hetical FT strong similar to E.coli and H.influenzae FT threoninedehydratases, (326aa), fasta scores, opt:14 64, FT E():0, (66.4% identity in 318 aa overlap)" FT /product="putative serine-threonine dehydratase; similar FT to S. cerevisiae YKL218C" FT /fasta_file="fasta/c320.tab.seq.04464.out" FT CDS 141575..142729 FT /colour=2 FT /gene="sex1" FT /gene="ark1" FT /gene="SPCC330.16" FT /gene="SPCC320.13c" FT /label=sex1 FT /note="SPCC330.16, len:384" FT /product="serine/threonine protein kinase; aurora homolog; FT required for spindle formation (PMID:11792803); required FT for cytokinesis; required for chromosome segregation; FT possibly phosphorylates SER10 of hht3 (PMID:11792803)" FT /fasta_file="fasta/c330.tab.seq.04555.out" FT /note="SPCC320.13c, len:384, SIMILARITY:Xenopus laevis, FT Q91820, P46EG265, The Xenopus protein kinase pEg2 FT associates with the centrosome in a cell cycle-dependent FT manner, binds to the spindle microtubules and is involved FT in bipolar mitotic spindle assembly., fasta scores, FT opt:1185, E():0, (48.2% identity in 380 aa overlap), also FT similar eg. to P97477, serine/threonine protein kinase, FT (395aa),fasta scores, opt:1157, E():0, (54.9% identity in FT 317 aa overlap)" FT /fasta_file="fasta/c320.tab.seq.04465.out" FT CDS 176957..178048 FT /EC_number="2.8.1.6" FT /colour=2 FT /gene="bio2" FT /gene="SPCC320.01c" FT /gene="SPCC1235.02" FT /label=bio2 FT /note="SPCC320.01c, len:362" FT /product="biotin synthase" FT /fasta_file="fasta/c320.tab.seq.04477.out" FT /note="SPCC1235.02, len:363" FT /fasta_file="fasta/c1235.tab.seq.04433.out" FT CDS complement(join(143220..143227,143294..143843)) FT /colour=7 FT /gene="SPCC330.17c" FT /gene="SPCC320.12" FT /label=SPCC330.17c FT /note="SPCC330.17c, len:185, SIMILARITY: to YNR020C, FT YN8A_Y EAST, HYPOTHETICAL PROTEIN, (270aa), fasta scores, FT opt:592, E():0, (47.5% identity in 183 aa overlap)" FT /product="putative neutral zinc metallopeptidase; similar FT to S. cerevisiae YNR020C" FT /fasta_file="fasta/c330.tab.seq.04556.out" FT /label=SPCC320.12 FT /note="SPCC320.12, len:184, SIMILARITY:Saccharomyces FT cerevisiae, YNR020C, YN8A_YEAST,hypothetical protein FT (270aa), fast a scores, opt:592, E():0, (47.5% identity in FT 183 aa overlap)" FT /product="putative neutral zinc metallopeptidase" FT /fasta_file="fasta/c320.tab.seq.04466.out" FT CDS join(144380..144435,144589..144675,144838..145237) FT /colour=7 FT /gene="SPCC330.18" FT /gene="SPCC320.11c" FT /label=SPCC330.18 FT /note="SPCC330.18, len:180, SIMILARITY: Saccharomyces FT cerev isiae, YPL211W, Q08962, involved in 60S ribosome s FT ubunit biogenesis(181 aa), opt: 892, E():0 (70.6% identity FT in 180 aa overlap)" FT /product="possibly involved in 60S ribosome subunit FT biogenesis" FT /fasta_file="fasta/c330.tab.seq.04557.out" FT /label=SPCC320.11c FT /note="SPCC320.11c, len:179, SIMILARITY:Saccharomyces FT cerevisiae, YPL21 1W, Q08962, required for efficient 60S FT ribosome subunit bio genesis, (181aa), fasta scores, FT opt:892, E():0, (70.6% iden tity in 180 aa overlap)" FT /product="putative ribosome biogenesis protein" FT /fasta_file="fasta/c320.tab.seq.04467.out" FT rRNA complement(1..2852) FT /note="13000 (-1) 7 2860 SP18RRNAA S.pombe gene encoding FT 18S, 5.8S, and 28S ribosomal RNA." FT rRNA complement(5542..13722) FT /note="38009 (-1) 7 7865 SP18RRNAA S.pombe gene encoding FT 18S, 5.8S, and 28S ribosomal RNA." FT LTR complement(486575..486925) FT /note="Tf2-type LTR" FT /note="Tf1-type LTR" FT rRNA complement(16412..24810) FT /note="38004 (-1) 17 7865 SP18RRNAA S.pombe gene encoding FT 18S, 5.8S, and 28S ribosomal RNA." FT LTR complement(26343..26675) FT /note="216 (-1) 10 349 Tf2-type LTR" FT CDS complement(28680..29423) FT /colour=12 FT /gene="SPCP20C8.01c" FT /label=SPCP20C8.01 FT /note="SPCP20C8.01c, len:248" FT /note="SPCP20C8.01c, len:0, SIMILARITY:Schizosaccharomyces FT pombe, Q9Y7S1, hypothetical 12.8 kDa protein., (113 aa), FT fasta scores: opt: 646, E():0, (89.7% identity in 107 aa)" FT /note="SPCP20C8.03, len:0, SIMILARITY:Schizosaccharomyces FT pombe, Q9Y7S2, hypothetical repeat containing protein., FT (396 aa), fasta scores: opt: 840, E():0, (57.1% identity FT in 322 aa)" FT /product="hypothetical telomeric repeat containing FT protein; duplicated in S. pombe; possibly S. pombe FT specific; see also S. pombe SPCC569.03 and SPCC569.01C" FT /fasta_file="fasta/p20C8.tab.seq.05389.out" FT CDS complement(31185..31520) FT /colour=12 FT /gene="SPCP20C8.02c" FT /label=SPCP20C8.02 FT /note="SPCP20C8.02c, len:247" FT /product="hypothetical telomeric protein; duplicated in S. FT pombe; see also SPCC569.02C and SPAPJ695.01C; possibly S. FT pombe specific; predicted N-terminal signal sequence" FT /fasta_file="fasta/p20C8.tab.seq.05390.out" FT LTR 108555..108863 FT /colour=4 FT /note="degraded tf2 type LTR" FT /note="LTR" FT LTR complement(31728..31925) FT /note="446 (-1) 144 349 Tf2-type LTR" FT misc_feature 33134..33274 FT /note="nominal overlap with SPCC1884 S. pombe chromosome 3" FT misc_feature 33134..36059 FT /note="telomeric repeat region by similarity" FT misc_feature 36398..36755 FT /note="shows similar to region 1..534 in this cosmid FT annotated as region of duplicated DNA, telomere associated, FT also in c26F1 not mapped to the telomere" FT misc_feature 36559..36627 FT /note="similar to S.pombe chromosome I cosmid c26F1." FT CDS join(36972..36985,37169..37724,37872..38142, FT 38193..38788) FT /colour=4 FT /gene="SPCC1884.01" FT /label=SPCC1884.01 FT /note="SPCC1884.01, len:479, putative pseudogen 2 non- FT conse nsus branch and acceptors, SIMILARITY:Saccharomyces FT cerevis iae virus la., Q87026, capsid., (697 aa), fasta FT scores: opt : 150, E():1.2e-15, (20.5% identity in 507 aa), FT has non-con sensus branch acceptor sites, but this FT prediction gave the best fasta score. Possible pseudo FT gene?" FT /product="possibly pseudogene telomeric and has 2 non- FT consesus branch sites" FT /pseudo FT /fasta_file="fasta/c1884.tab.seq.05000.out" FT misc_feature 36986..36991 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 37138..37168 FT /colour=6 FT /note="ctgatttttgcatttttggcactgaaaccag, splice branch and FT a cceptor" FT misc_feature 37725..37730 FT /colour=6 FT /note="gtgatt, splice donor sequence" FT misc_feature 37851..37871 FT /colour=6 FT /note="no branch consensus- putative pseudogene" FT misc_feature 38143..38148 FT /colour=6 FT /note="gtattc, splice donor sequence" FT misc_feature 38173..38192 FT /colour=6 FT /note="no branch consensus- putative pseudogene" FT misc_RNA 41986..42712 FT /gene="meu3" FT /note="meu3 RNA" FT LTR 43111..43459 FT /note="Tf2 type LTR" FT misc_feature 44098..44597 FT /note="nominal overlap with cosmid SPCC757, EM:AL031825 S. FT pombe chromosome 3" FT misc_feature complement(44098..44597) FT /note="nominal overlap with cosmid SPCC1884, EM:AL031787 FT S. pombe chromosome 3" FT CDS complement(45695..46912) FT /colour=10 FT /gene="SPCC757.02c" FT /label=SPCC757.02c FT /note="SPCC757.02c, len:405, SIMILARITY:Arabidopsis FT thaliana, CAB45057, hypothetical 44.2 kD protein., (388 FT aa), fasta scores: opt: 435, E():1.1e-22, (27.8% identity FT in 400 aa)" FT /product="hypothetical protein; conserved in A. thaliana; FT Pfam-B_37808 domain; no apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c757.tab.seq.04920.out" FT CDS complement(47741..48475) FT /colour=10 FT /gene="SPCC757.03c" FT /label=SPCC757.03c FT /note="SPCC757.03c, len:244, FT SIMILARITY:Schizosaccharomyces pombe, YA02_SCHPO, FT hypothetical 26.1 kD protein c5h10.02c, (240 aa), fasta FT scores: opt: 986, E():0, (60.7% identity i n 234 aa)" FT /product="putative ThiJ/PfpI family protein" FT /fasta_file="fasta/c757.tab.seq.04921.out" FT LTR 49206..49550 FT /note="tf2-type LTR" FT CDS join(50358..50552,50678..52537) FT /colour=7 FT /gene="SPCC757.04" FT /label=SPCC757.04 FT /note="SPCC757.04, len:684, SIMILARITY:Schizosaccharomyces FT pombe, E1319426, putative transcriptional activator, (555 FT a a), fasta scores: opt: 1561, E():0, (42.9% identity in FT 567 aa)" FT /product="putative transcriptional regulator; zinc finger FT protein; fungal Zn(2)-Cys(6) binuclear cluster domain" FT /fasta_file="fasta/c757.tab.seq.04922.out" FT misc_feature 50553..50558 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 50658..50677 FT /colour=6 FT /note="ctaatttaatcaatcgacag, splice branch and acceptor" FT misc_feature 50672..50761 FT /note="Match to PF00172 Zn_clus, fungal Zn(2)-Cys(6) FT binuclear cluster domain Score 37.73" FT CDS complement(52910..54112) FT /colour=7 FT /gene="SPCC757.05c" FT /label=SPCC757.05c FT /note="SPCC757.05c, len:400, SIMILARITY:Caenorhabditis FT eleg ans., Q18622, similar to e. coli acetylornithine FT deacety lase, (244 aa), fasta scores: opt: 420, E():4.6e- FT 23, (38.5% identity in 213 aa)" FT /product="putative acetylornithine deacetylase; peptidase FT M20 domain; putative succinate metabolism; no apparent S. FT cerevisiae ortholog" FT /fasta_file="fasta/c757.tab.seq.04923.out" FT misc_feature complement(53066..53917) FT /note="Match to PF01546 Peptidase_M20, Peptidase family FT M20/M25/M40 Score 125.97" FT CDS join(55579..55608,55666..55779,55823..56029) FT /colour=9 FT /gene="SPCC757.06" FT /label=SPCC757.06 FT /note="SPCC757.06, len:106, questionable ORF" FT /product="very hypothetical protein" FT /fasta_file="fasta/c757.tab.seq.04924.out" FT misc_feature 55609..55614 FT /colour=6 FT /note="gtgtgt, splice donor sequence" FT misc_feature 55651..55665 FT /colour=6 FT /note="ttgatatttttccag, splice branch and acceptor" FT misc_feature 55780..55785 FT /colour=6 FT /note="gttagt, splice donor sequence" FT misc_feature 55802..55822 FT /colour=6 FT /note="ttaatttcggcaaaatcaaag, splice branch and acceptor" FT CDS complement(56927..58465) FT /EC_number="1.11.1.6" FT /colour=2 FT /gene="ctt1" FT /gene="cta1" FT /gene="SPCC757.07c" FT /label=ctt1 FT /note="SPCC757.07c, len:512" FT /product="catalase" FT /fasta_file="fasta/c757.tab.seq.04925.out" FT misc_feature complement(57008..58429) FT /colour=9 FT /note="Pfam match to entry PF00199 catalase, Catalases" FT misc_feature complement(57422..57448) FT /colour=8 FT /note="PS00437 Catalase proximal heme-ligand signature" FT misc_feature complement(58271..58321) FT /colour=8 FT /note="PS00438 Catalase proximal active site signature" FT misc_feature complement(58466..62998) FT /note="putative gene-free region" FT misc_feature complement(join(60239..60260,60432..60490,60548..60703, FT 60774..60833)) FT /note="NOTE:possibly a gene here but can't get a good FT prediction; introns have good scores though. May be a FT pseudo?" FT intron complement(60261..60431) FT /colour=7 FT /note="Intron predicted by HMM_intron, Score=7.18" FT intron complement(60491..60547) FT /colour=7 FT /note="Intron predicted by HMM_intron, Score=12.11" FT intron complement(60704..60773) FT /colour=7 FT /note="Intron predicted by HMM_intron, Score=16.24" FT CDS join(62999..63162,63217..63336,63436..64027) FT /colour=7 FT /gene="SPCC757.08" FT /label=SPCC757.08 FT /note="SPCC757.08, len:291, SIMILARITY:Saccharomyces FT cerevi siae, Q05636, exosome 3'-5' exoribonuclease complex FT involved in 3'-end processing of multiple small RNA FT species, (305 aa), fasta scores: opt: 826, E():0, (49.5% FT identity in 303 aa)" FT /product="putative exosome 3'-5' exoribonuclease complex; FT involved in 3'-end processing of multiple small RNA FT species; similar to S. cerevisiae RRP45" FT /fasta_file="fasta/c757.tab.seq.04926.out" FT misc_feature join(63068..63162,63217..63336,63436..63904) FT /note="Match to PF01138 RNase_PH, 3' exoribonuclease FT family Score 127.44" FT misc_feature 63163..63168 FT /colour=6 FT /note="gtatat, splice donor sequence" FT misc_feature 63201..63216 FT /colour=6 FT /note="ctaacaagtactgtag, splice branch and acceptor" FT misc_feature 63337..63342 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 63423..63435 FT /colour=6 FT /note="ctaataatcacag, splice branch and acceptor" FT CDS complement(65489..66685) FT /colour=7 FT /gene="SPCC757.09c" FT /label=SPCC757.09c FT /note="SPCC757.09c, len:398, SIMILARITY:Saccharomyces FT cerev isiae, YBL032W, YBD2_YEAST, hypothetical 41.7 kD FT protein in rib1-aac2 intergenic region., (381 aa), fasta FT scores: opt: 187, E():5.1e-18, (27.9% identity in 340 aa)" FT /product="RNA-binding protein; contains KH domain; FT putative polyadenylation factor; similar to S. cerevisiae FT PBP2" FT /fasta_file="fasta/c757.tab.seq.04927.out" FT misc_feature complement(65567..65716) FT /colour=9 FT /note="Pfam match to entry PF00013 KH-domain, KH domain FT fam ily of RNA-binding proteins" FT misc_feature complement(65993..66142) FT /colour=9 FT /note="Pfam match to entry PF00013 KH-domain, KH domain FT fam ily of RNA-binding proteins" FT misc_feature complement(66251..66397) FT /colour=9 FT /note="Pfam match to entry PF00013 KH-domain, KH domain FT fam ily of RNA-binding proteins" FT CDS join(68612..68953,69017..69235) FT /colour=7 FT /gene="vph2" FT /gene="SPCC757.10" FT /label=vph2 FT /note="SPCC757.10, len:186, LOW SIMILARITY:Saccharomyces FT cerevisiae, VM12_YEAST, vacuolar atpase assembly integral FT membrane protein vma12, (215 aa), fasta scores: opt: 164, FT E():5.7e-05, (29.5% identity in 105 aa)" FT /product="putative vacuolar ATPase assembly protein; FT similar to S. cerevisiae VPH2" FT /fasta_file="fasta/c757.tab.seq.04928.out" FT misc_feature 68954..68959 FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature 68998..69016 FT /colour=6 FT /note="ttgacttaatattatttag, splice branch and acceptor" FT CDS complement(69641..71056) FT /colour=7 FT /gene="SPCC757.11c" FT /label=SPCC757.11c FT /note="SPCC757.11c, len:471, FT SIMILARITY:Schizosaccharomyces pombe, Q12519, hypothetical FT 56.1 kD protein., (500 aa), fa sta scores: opt: 1176, FT E():0, (40.6% identity in 443 aa)" FT /product="conserved protein; putative membrane FT transporter; no apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c757.tab.seq.04929.out" FT tRNA 71400..71471 FT /note="tRNA His anticodon GTG" FT CDS 73483..75360 FT /colour=7 FT /gene="SPCC757.12" FT /label=SPCC757.12 FT /note="SPCC757.12, len:625, SIMILARITY:Schizosaccharomyces FT pombe, Q9Y7S9, alpha-amylase SPCC63.02C, (564 aa), fasta FT scores: opt: 1578, E():0, (43.4% identity in 546 aa)" FT /product="putative alpha-amylase; no apparent S. FT cerevisiae ortholog" FT /fasta_file="fasta/c757.tab.seq.04930.out" FT misc_feature 73576..74820 FT /colour=9 FT /note="Pfam match to entry PF00128 alpha-amylase, Alpha FT amy lases (family of glycosyl hydrolases)" FT CDS 78044..79612 FT /colour=7 FT /gene="SPCC757.13" FT /label=SPCC757.13 FT /note="SPCC757.13, len:522, SIMILARITY:Schizosaccharomyces FT pombe, O94491, putative allantoate permease., (508 aa), FT fasta scores: opt: 1083, E():0, (36.0% identity in 520 aa)" FT /product="putative MFS allantoate transporter" FT /fasta_file="fasta/c757.tab.seq.04931.out" FT misc_feature complement(79801..81325) FT /note="nominal overlap with cosmid SPCC613, EM:AL031644 S. FT pombe chromosome 3" FT misc_feature complement(79801..81325) FT /note="nominal overlap with cosmid SPCC757, EM:AL031825 S. FT pombe chromosome 3" FT CDS 82860..84353 FT /colour=7 FT /gene="SPCC613.02" FT /label=SPCC613.02 FT /note="SPCC613.02, len:497, shows strong similar to SPCC FT 613.01, SIMILARITY:Schizosaccharomyces pombe, Q12519, FT hypothetical 56.1 kD protein., (500 aa), fasta scores: FT opt: 1890 , E():0, (56.9% identity in 501 aa)" FT /product="MFS transporter of unknown specificity; similar FT S. pombe SPCC613.01 and S. pombe SPCC330.07c and FT SPCC757.11c (paralogs); conserved in A. thaliana; no FT apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c613.tab.seq.00030.out" FT CDS 85363..85932 FT /colour=7 FT /gene="SPCC613.03" FT /label=SPCC613.03 FT /note="SPCC613.03, len:189, SIMILARITY:Saccharomyces FT cerevi siae, YLR250W, S120_YEAST, protein ssp120 , (234 a FT a), fasta scores: opt: 174, E():4.6e-17, (33.9% identity FT in 192 aa)" FT /product="EF hand protein; possibly involved in secretion; FT similar to S. cerevisiae SSP120" FT /fasta_file="fasta/c613.tab.seq.04947.out" FT misc_feature 85621..85659 FT /colour=8 FT /note="PS00018 EF-hand calcium-binding domain" FT CDS complement(86370..88610) FT /colour=2 FT /gene="rng3" FT /gene="SPCC613.04c" FT /label=rng3 FT /note="SPCC613.04c, len:746, SIMILARITY:Podospora anserina, FT O42829, cro1 protein., (702 aa), fasta scores: opt: 463, FT E ():3.1e-24, (30.0% identity in 367 aa)" FT /product="UCS-domain protein; required for actomyosin ring FT assembly; involved in assembly of myosin II containing FT proteins at the division site; cytoplasmic" FT /fasta_file="fasta/c613.tab.seq.04948.out" FT CDS complement(join(88905..89136,89421..89557)) FT /colour=2 FT /gene="rpl35" FT /gene="SPCC613.05c" FT /label=rpl35 FT /note="SPCC613.05c, len:122, SIMILARITY:Arabidopsis FT thalian a, G3355468, putative ribosomal protein l35., (123 FT aa), fas ta scores: opt: 438, E():0, (58.8% identity in FT 119 aa)" FT /product="60S ribosomal protein L35" FT /fasta_file="fasta/c613.tab.seq.04949.out" FT misc_feature complement(join(89088..89136,89421..89539)) FT /note="Match to PF00831 Ribosomal_L29, Ribosomal L29 FT protein Score 46.66" FT misc_feature complement(89137..89151) FT /colour=6 FT /note="ctaacttatttatag, splice branch and acceptor" FT intron complement(89137..89420) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(89415..89420) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS 89780..90349 FT /colour=2 FT /gene="rpl9-2" FT /gene="SPCC613.06" FT /label=rpl9-2 FT /note="SPCC613.06, len:189" FT /product="60S ribosomal protein L9" FT /fasta_file="fasta/c613.tab.seq.04950.out" FT misc_feature 89816..90346 FT /colour=9 FT /note="Pfam match to entry PF00347 L6, Ribosomal protein FT L6" FT misc_feature 90260..90325 FT /colour=8 FT /note="PS00700 Ribosomal protein L6 signature 2" FT CDS 91686..92723 FT /colour=7 FT /gene="SPCC613.07" FT /label=SPCC613.07 FT /note="SPCC613.07, len:345, SIMILARITY:Saccharomyces FT cerevi siae, YHR040W, YHK0_YEAST, hypothetical 42.3 kD FT protein, (3 66 aa), fasta scores: opt: 183, E():3e-10, FT (22.2% identity in 351 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YHR040W" FT /fasta_file="fasta/c613.tab.seq.04951.out" FT CDS join(93017..93230,93285..93496,93618..94169) FT /colour=7 FT /gene="SPCC613.08" FT /label=SPCC613.08 FT /note="SPCC613.08, len:325, SIMILARITY:Saccharomyces FT cerevi siae, YDR361C, Q06338, hypothetical protein (283 FT aa), fast a scores: opt: 232, E():1e-21, (35.4% identity FT in 257 aa)" FT /product="putative cdk inhibitor by similar to human tok1" FT /fasta_file="fasta/c613.tab.seq.04952.out" FT misc_feature 93231..93236 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 93268..93284 FT /colour=6 FT /note="ttaactttttatattag, splice branch and acceptor" FT misc_feature 93497..93502 FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature 93601..93617 FT /colour=6 FT /note="ctaacggtacttattag, splice branch and acceptor" FT CDS join(94731..94831,94909..95046,95116..96031) FT /colour=7 FT /gene="SPCC613.09" FT /label=SPCC613.09 FT /note="SPCC613.09, len:384, SIMILARITY:Saccharomyces FT cerevi siae, SE54_YEAST, tRNA-splicing endonuclease FT subunit sen54, (467 aa), fasta scores: opt: 264, E():0, FT (28.0% identity i n 418 aa)" FT /product="putative tRNA-splicing endonuclease subunit; FT similar to S. cerevisiae SEN34" FT /fasta_file="fasta/c613.tab.seq.04953.out" FT misc_feature 94832..94837 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 94888..94908 FT /colour=6 FT /note="ctaatttcattaaaataacag, splice branch and acceptor" FT misc_feature 95047..95052 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 95096..95115 FT /colour=6 FT /note="ctaacgtggatggcatttag, splice branch and acceptor" FT CDS 96721..98001 FT /EC_number="1.10.2.2" FT /colour=7 FT /gene="qcr2" FT /gene="SPCC613.10" FT /label=qcr2 FT /note="SPCC613.10, len:426, SIMILARITY:Neurospora crassa, FT T R:o60044, cytochrome c reductasecore protein II (454 aa), FT f asta scores: opt: 741, E():0, (37.0% identity in 419 FT aa)" FT /product="putative ubiquinol cytochrome c reductase FT complex subunit ( cytochrome bc1 complex ); respiratory FT complex III; core protein II" FT /fasta_file="fasta/c613.tab.seq.04954.out" FT misc_feature 96811..97251 FT /colour=9 FT /note="Pfam match to entry PF00675 Insulinase, Insulinase FT ( proteinase M16)" FT CDS complement(98721..99485) FT /colour=2 FT /gene="meu23" FT /gene="B13958-2" FT /gene="SPCC613.11c" FT /label=meu23 FT /note="SPCC613.11c, len:254" FT /product="Pfam-B_13958 domain; possibly S. pombe specific; FT meiotic expression upregulated" FT /fasta_file="fasta/c613.tab.seq.04955.out" FT CDS complement(100255..102171) FT /colour=7 FT /gene="SPCC613.12c" FT /label=SPCC613.12c FT /note="SPCC613.12c, len:638, low SIMILARITY:Kluyveromyces FT l actis, TUP1_KLULA, transcriptional repressor tup1, (682 FT aa) , fasta scores: opt: 101, E():2.4e-06, (20.9% identity FT in 3 02 aa)" FT /product="WD repeat protein" FT /fasta_file="fasta/c613.tab.seq.04956.out" FT misc_feature complement(100450..100536) FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 25.48" FT misc_feature complement(100624..100737) FT /colour=9 FT /note="Pfam match to entry PF00400 WD40, WD domain, G-beta FT repeat, score 5.90, E-value 9.3" FT misc_feature complement(101191..101307) FT /colour=9 FT /note="Pfam match to entry PF00400 WD40, WD domain, G-beta FT repeat, score 15.80, E-value 0.46" FT misc_feature complement(102856..103107) FT /colour=9 FT /note="Pfam match to entry PF00271 helicase_C, Helicases FT co nserved C-terminal domain" FT misc_feature complement(103318..103446) FT /colour=9 FT /note="Pfam match to entry PF00097 zf-C3HC4, zinc finger, FT C 3HC4 type (RING finger)" FT misc_feature complement(103372..103401) FT /colour=8 FT /note="PS00518 zinc finger, C3HC4 type (RING finger), FT signature" FT misc_feature complement(103498..104499) FT /colour=9 FT /note="Pfam match to entry PF00176 SNF2_N, SNF2 and others FT N-terminal domain" FT misc_feature 103512..108799 FT /note="nominal overlap with cosmid SPCC330, EM:AL031603 S. FT pombe chromosome 3" FT misc_feature 105737..105742 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 105769..105784 FT /colour=6 FT /note="ctaatgcattattcag, splice branch and acceptor" FT misc_feature complement(103512..108799) FT /note="nominal overlap with cosmid SPCC613, EM:AL031644 S. FT pombe chromosome 3" FT misc_feature complement(103522..104499) FT /note="Match to PF00176 SNF2_N, SNF2 and others N-terminal FT domain Score 279.65" FT misc_feature 105737..105742 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 105769..105784 FT /colour=6 FT /note="ctaatgcattattcag, splice branch and acceptor" FT CDS complement(join(109871..109938,109994..110171, FT 110311..110502)) FT /colour=7 FT /gene="SPCC330.03c" FT /label=SPCC330.03c FT /note="SPCC330.03c, len:145, FT SIMILARITY:Schizosaccharomyces pombe, YDAA_SCHPO, FT hypothetical 16.7 kD protein c1f12.10c in chromosome i., FT (147 aa), fasta scores: opt: 537, E():0, (55.1% identity FT in 147 aa) also similar to YMW3_YEAST, weak similarity to FT C-terminal part of cytochrome b5 and b2, (20 1 aa) fasta FT scores, opt:234, E(): 1.2e-10, (32.7% identity in 107 aa FT overlap)" FT /product="putative Cytochrome b5 family" FT /fasta_file="fasta/c330.tab.seq.04542.out" FT misc_feature complement(109939..109953) FT /colour=6 FT /note="ttaacaactatatag, splice branch and acceptor" FT misc_feature complement(109971..110150) FT /note="Match to PF00173 heme_1, Heme-binding domain in FT cytochrome b5 and oxidoreductases Score 32.62" FT misc_feature complement(109988..109993) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(110172..110189) FT /colour=6 FT /note="ctaacaccgatgctttag, splice branch and acceptor" FT misc_feature complement(110305..110310) FT /colour=6 FT /note="gtatga, splice donor sequence" FT LTR complement(111397..111560) FT /note="LTR-fragment" FT CDS complement(112305..113378) FT /colour=12 FT /gene="B13958-3" FT /gene="SPCC330.04c" FT /label=B13958-3 FT /note="SPCC330.04c, len:357, biased repeat containing FT protein - contains 6 copies of'WKKAREEDKAE' repeat and 6 FT copies of a smaller 'WRNSMDE' repeat, the first repeat FT structure is similar to 6 repeats found in STREPTOCOCCUS FT LACTIS, PLASMI D PIL2614 REPLICATION PROTEIN,(292aa), FT fasta scores: opt:17 2, E():6.4e-05, (23.2% identity in FT 276 aa overlap)" FT /product="Pfam-B_13958 domain; possibly S. pombe specific; FT repeat containing" FT /fasta_file="fasta/c330.tab.seq.04543.out" FT tRNA complement(113716..113786) FT /note="tRNA Gly anticodon GCC" FT LTR 114382..114730 FT /colour=4 FT /note="tf2 type LTR" FT CDS complement(115781..116575) FT /EC_number="4.1.1.23" FT /colour=2 FT /gene="ura4" FT /gene="SPCC330.05c" FT /label=ura4 FT /note="SPCC330.05c, len:264" FT /product="orotidine 5'-phosphate decarboxylase; similar to FT S. cerevisiae URA3" FT /fasta_file="fasta/c330.tab.seq.04544.out" FT misc_feature complement(115784..116551) FT /note="Match to PF00215 OMPdecase, Orotidine 5'-phosphate FT decarboxylases Score 555.01" FT CDS complement(118423..118893) FT /colour=2 FT /gene="pmp20" FT /gene="SPCC330.06c" FT /label=pmp20 FT /note="SPCC330.06c, len:156" FT /product="peroxisomal membrane protein Pmp20p, Ahpc-TSA fa FT mily protein" FT /fasta_file="fasta/c330.tab.seq.04545.out" FT misc_feature complement(118459..118884) FT /note="Match to PF00578 AhpC-TSA, AhpC/TSA family Score FT 36.62" FT CDS complement(120913..122415) FT /colour=7 FT /gene="SPCC330.07c" FT /label=SPCC330.07c FT /note="SPCC330.07c, len:500" FT /product="MFS transporter of unknown specificity; no FT apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c330.tab.seq.04546.out" FT conflict 123340 FT /citation=[1] FT /note="indeterminate no of bases in polyA tract" FT CDS 124563..125978 FT /colour=2 FT /gene="alg11" FT /gene="gmd3" FT /gene="SPCC330.08" FT /label=alg11 FT /note="SPCC330.08, len:471, SIMILARITY:Saccharomyces FT cerevi siae, ALGB_YEAST, alg11 protein, required for FT asparagine-li nked glycosylation., (548 aa), fasta scores: FT opt: 802, E(): 0, (45.6% identity in 371 aa)" FT /product="glycosyl transferase; involved in N-linked FT oligosacchadride synthesis" FT /fasta_file="fasta/c330.tab.seq.04547.out" FT misc_feature 125346..125882 FT /note="Match to PF00534 Glycos_transf_1, Glycosyl FT transferases group 1 Score 83.93" FT misc_feature 125346..125885 FT /colour=9 FT /note="Pfam match to entry PF00534 Glycos_transf_1, FT Glycosy l transferases group 1" FT CDS 127294..129198 FT /colour=10 FT /gene="SPCC330.09" FT /label=SPCC330.09 FT /note="SPCC330.09, len:634, SIMILARITY:Saccharomyces FT cerevisiae, YGR145W, YG3J_YEAST, hypothetical 81.7 kD FT protein, (7 07 aa), fasta scores: opt: 1002, E():0, (45.8% FT identity in 661 aa)" FT /product="conserved protein; similar to S. cerevisiae FT YGR145W; essential in S. cerevisiae; predicted ortholog in FT Drosophila and C. elegans; putative WD repeat protein" FT /fasta_file="fasta/c330.tab.seq.04548.out" FT CDS 129844..131013 FT /colour=2 FT /gene="pcm1" FT /gene="SPCC330.10" FT /label=pcm1 FT /note="SPCC330.10, len:389, SIMILARITY:Saccharomyces FT cerevisiae, YBR236C, ABD1_YEAST, abd1 protein, mRNA cap FT methyltransferase., (436 aa), fasta scores: opt: 588, FT E():0, (43.3% identity in 356 aa)" FT /product="mRNA capping methyltransferase; methylates the FT terminal guanine residue of the mRNA cap; similar to S. FT cerevisiae ABD1" FT /fasta_file="fasta/c330.tab.seq.04549.out" FT CDS 131517..135560 FT /colour=7 FT /gene="SPCC330.11" FT /label=SPCC330.11 FT /note="SPCC330.11, len:1347, SIMILARITY:Homo sapiens, FT Y032_ HUMAN, hypothetical proteinkiaa0032, (1050 aa), FT fasta scor es: opt: 261, E():9.4e-06, (29.0% identity in FT 238 aa)" FT /product="BTB domain and Ankaryin repeat containing FT protein." FT /fasta_file="fasta/c330.tab.seq.04550.out" FT misc_feature 131667..131768 FT /colour=9 FT /note="Pfam match to entry PF00023 ank, Ank repeat" FT misc_feature 131670..131768 FT /note="Match to PF00023 ank, Ank repeat Score 31.55" FT misc_feature 131772..131852 FT /note="Match to PF00023 ank, Ank repeat Score 21.88" FT misc_feature 131772..131864 FT /colour=9 FT /note="Pfam match to entry PF00023 ank, Ank repeat" FT misc_feature 133329..133718 FT /note="Match to PF00651 BTB, BTB/POZ domain Score 90.08" FT CDS complement(135957..136499) FT /colour=7 FT /gene="sdh3" FT /gene="SPCC330.12c" FT /label=SPCC330.12c FT /note="SPCC330.12c, len:180, SIMILARITY:Saccharomyces FT cerev isiae, YM07_YEAST, putative succinate dehydrogenase FT cytochr ome b subunit ., (196 aa), fasta scores: opt: 359, FT E():3.4e-25, (40.3% identity in 154 aa)" FT /product="putative succinate dehydrogenase (ubiquinone) FT reductase membrane anchor subunit; TCA cycle; FT mitochondrial" FT /fasta_file="fasta/c330.tab.seq.04551.out" FT misc_feature complement(135984..136328) FT /note="Match to PF01127 Sdh_cyt, Succinate dehydrogenase FT cytochrome b subunit Score 157.01" FT CDS 137021..137749 FT /colour=2 FT /gene="rpc37" FT /gene="SPCC330.13" FT /label=SPCC330.13 FT /note="SPCC330.13, len:242" FT /product="RNA polymerase III subunit; similar to S. FT cerevisiae RPC37" FT /fasta_file="fasta/c330.tab.seq.04552.out" FT misc_feature complement(138333..138545) FT /note="Match to PF01246 Ribosomal_L24e, Ribosomal protein FT L24e Score 145.51" FT misc_feature complement(138514..146200) FT /note="nominal overlap with cosmid SPCC320, EM:AL022245 S. FT pombe chromosome 3" FT misc_feature complement(139264..140136) FT /note="Match to PF00291 S_T_dehydratase, Pyridoxal- FT phosphate dependent enzyme Score 316.49" FT misc_feature 141926..142681 FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain Score 330.93" FT misc_feature complement(143228..143251) FT /colour=6 FT /note="ctaactattcattctttcgtctag, splice branch and FT acceptor" FT misc_feature complement(143288..143293) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature complement(143568..143597) FT /colour=8 FT /note="PS00142 Neutral zinc metallopeptidases, zinc FT binding region signature" FT misc_feature 144436..144441 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 144572..144588 FT /colour=6 FT /note="ctgactagtaaaactag, splice branch and acceptor" FT misc_feature 144676..144681 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 144823..144837 FT /colour=6 FT /note="ttaacatacttatag, splice branch and acceptor" FT CDS complement(138096..138545) FT /colour=2 FT /gene="rpl24-2" FT /gene="SPCC330.14c" FT /label=rpl24-2 FT /note="SPCC330.14c, len:149" FT /product="60S ribosomal protein L24" FT /fasta_file="fasta/c330.tab.seq.04553.out" FT tRNA 140967..141038 FT /note="tRNA Glu anticodon CTC" FT /note="tRNA Glu anticodon CTC, Cove score 74.15" FT misc_feature complement(138514..138545) FT /note="rpl24-2 see c330 for full length CDS" FT misc_feature 138514..146200 FT /note="nominal overlap with cosmid SPCC330, EM:AL031603 S. FT pombe chromosome 3" FT misc_feature complement(139636..140031) FT /colour=9 FT /note="Pfam match to entry S_T_dehydratase , beta-synthase" FT misc_feature 141926..142681 FT /colour=9 FT /note="Pfam match to entry pkinase PF00069, Eukaryotic FT prot ein kinase domain" FT misc_feature 141944..142015 FT /colour=8 FT /note="PS00107 protein kinases ATP-binding region FT signature" FT misc_feature 142283..142321 FT /colour=8 FT /note="PS00108 Serine/Threonine protein kinases active- FT site signature" FT misc_feature complement(143228..143251) FT /colour=6 FT /note="ctaactattcattctttcgtctag, splice branch and FT acceptor" FT misc_feature complement(143288..143293) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature complement(143568..143597) FT /colour=8 FT /note="PS00142 Neutral zinc metallopeptidases, zinc FT binding region signature" FT misc_feature 144436..144441 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 144572..144588 FT /colour=6 FT /note="ctgactagtaaaactag, splice branch and acceptor" FT misc_feature 144676..144681 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 144823..144837 FT /colour=6 FT /note="ttaacatacttatag, splice branch and acceptor" FT CDS complement(join(146210..147251,147298..147617, FT 147669..147731,147868..148128)) FT /colour=2 FT /gene="srp72" FT /gene="SPCC320.10" FT /label=srp72 FT /note="SPCC320.10, len:560, SIMILARITY:Homo sapiens, FT SR72_HUMAN, signal recognition particle 72 kD protein, FT (670 aa), fasta scores: opt: 354, E():1.4e-14, (24.6% FT identity in 574 aa)" FT /product="putative signal recognition particle subunit" FT /fasta_file="fasta/c320.tab.seq.04468.out" FT misc_feature complement(147252..147268) FT /colour=6 FT /note="ctaattttgataaacag, splice branch and acceptor" FT misc_feature complement(147292..147297) FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature complement(147318..147359) FT /colour=8 FT /note="PS00761 Signal peptidases I signature 3" FT misc_feature complement(147618..147632) FT /colour=6 FT /note="ctaacttttaactag, splice branch and acceptor" FT misc_feature complement(147663..147668) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(147732..147748) FT /colour=6 FT /note="ctaacaacttattgaag, splice branch and acceptor" FT misc_feature complement(147862..147867) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS complement(join(149153..150163,150279..150323, FT 150374..150472)) FT /EC_number="4.99.1.1" FT /colour=7 FT /gene="SPCC320.09" FT /label=SPCC320.09 FT /note="SPCC320.09, len:383, SIMILARITY:Xenopus laevis, FT HEMZ_XENLA, ferrochelatase , (411 aa), fasta scores: opt: FT 1224, E():0, (48.5% identity in 377 aa)" FT /product="ferrochelatase" FT /fasta_file="fasta/c320.tab.seq.04469.out" FT misc_feature complement(149414..150376) FT /colour=9 FT /note="Pfam match to entry PF00762 Ferrochelatase, FT Ferrochelatase" FT misc_feature complement(150164..150176) FT /colour=6 FT /note="ctaatgttttcag, splice branch and acceptor" FT misc_feature complement(150273..150278) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature complement(150324..150340) FT /colour=6 FT /note="ctaacagaggtgtgcag, splice branch and acceptor" FT misc_feature complement(150368..150373) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS complement(151307..152824) FT /colour=10 FT /gene="SPCC320.08" FT /label=SPCC320.08 FT /note="SPCC320.08, len:504, SIMILARITY:Homo sapiens, FT Q14963, novel protein, (152 aa), fasta scores: opt: 285, FT E():6.8e-11, (41.4% identity in 116 aa)" FT /product="conserved protein; predicted transmembrane" FT /fasta_file="fasta/c320.tab.seq.04470.out" FT CDS 155906..158191 FT /colour=2 FT /gene="mde7" FT /gene="SPCC320.07c" FT /label=mde7 FT /note="SPCC320.07c, len:760, FT SIMILARITY:Schizosaccharomyces pombe, O74452, RNA binding FT protein., (561 aa), fasta scores: opt: 398, E():7.5e-16, FT (60.4% identity in 91 aa)" FT /product="putative RNA-binding protein; possibly involved FT in meiosis or sporulation" FT /fasta_file="fasta/c320.tab.seq.04471.out" FT misc_feature 155930..155953 FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 156569..156772 FT /colour=9 FT /note="Pfam match to entry rrm PF00076, RNA recognition FT mot if. (aka RRM, RBD, or RNP domain)" FT misc_feature 156572..156772 FT /colour=9 FT /note="Pfam match to entry PF00076 rrm, RNA recognition FT motif. (aka RRM, RBD, or RNP domain)" FT misc_feature 157715..157927 FT /colour=9 FT /note="Pfam match to entry PF00076 rrm, RNA recognition FT motif. (aka RRM, RBD, or RNP domain)" FT CDS complement(join(158577..159193,159251..159503)) FT /colour=8 FT /gene="SPCC320.06" FT /label=SPCC320.06 FT /note="SPCC320.06, len:288, SIMILARITY To C-term:Homo FT sapiens, G2459628, toll-like receptor 4., (799 aa), fasta FT scores: opt: 125, E():0.22, (23.4% identity in 201 aa)" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c320.tab.seq.04472.out" FT misc_feature complement(159194..159210) FT /colour=6 FT /note="ctaatatcgactctcag, splice branch and acceptor" FT misc_feature complement(159245..159250) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS complement(159993..161996) FT /colour=7 FT /gene="SPCC320.05" FT /label=SPCC320.05 FT /note="SPCC320.05, len:666, SIMILARITY:Saccharomyces FT cerevisiae, SULX_YEAST, putative sulfate transporter FT ypr003c, (754 aa), fasta scores: opt: 1026, E():0, (32.1% FT identity in 601 aa)" FT /product="SulP sulfate transporter" FT /fasta_file="fasta/c320.tab.seq.04473.out" FT misc_feature complement(160503..161462) FT /colour=9 FT /note="Pfam match to entry PF00916 Sulfate_transp, Sulfate FT transporter family" FT CDS join(163074..163175,163219..163294,163357..163493, FT 163541..163696,163754..163819,163864..163906, FT 163959..164291,164338..164726,164783..164884, FT 164931..165059,165104..165178,165229..165336, FT 165385..165561) FT /colour=10 FT /gene="SPCC320.04c" FT /label=SPCC320.04c FT /note="SPCC320.04c, len:629, SIMILARITY:Caenorhabditis FT elegans, Q94263, similar to the ras gene family, (625 aa), FT fasta scores: opt: 1236, E():0, (35.1% identity in 641 aa)" FT /product="conserved protein; ATP/GTP binding and 2 EF hand FT motifs" FT /fasta_file="fasta/c320.tab.seq.04474.out" FT misc_feature 163101..163124 FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 163176..163181 FT /colour=6 FT /note="gtagct, splice donor sequence" FT misc_feature 163207..163218 FT /colour=6 FT /note="ctaatgcgctag, splice branch and acceptor" FT misc_feature 163295..163300 FT /colour=6 FT /note="gtgaga, splice donor sequence" FT misc_feature 163338..163356 FT /colour=6 FT /note="ctaatatgacgacgtgtag, splice branch and acceptor" FT misc_feature 163494..163499 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 163527..163540 FT /colour=6 FT /note="ctaatataattgag, splice branch and acceptor" FT misc_feature 163635..163721 FT /colour=9 FT /note="Pfam match to entry PF00036 efhand, EF hand" FT misc_feature 163697..163702 FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature 163740..163753 FT /colour=6 FT /note="ctaacaataaaaag, splice branch and acceptor" FT misc_feature 163820..163825 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 163848..163863 FT /colour=6 FT /note="ctaataatcttactag, splice branch and acceptor" FT misc_feature 163907..163912 FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature 163947..163958 FT /colour=6 FT /note="ctaactagccag, splice branch and acceptor" FT misc_feature 163967..164005 FT /colour=8 FT /note="PS00018 EF-hand calcium-binding domain, D" FT misc_feature 163995..164081 FT /colour=9 FT /note="Pfam match to entry PF00036 efhand, EF hand" FT misc_feature 164292..164297 FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature 164318..164337 FT /colour=6 FT /note="ttaatgtaaaatgcaattag, splice branch and acceptor" FT misc_feature 164373..164411 FT /colour=8 FT /note="PS00018 EF-hand calcium-binding domain" FT misc_feature 164727..164732 FT /colour=6 FT /note="gtgagt, splice donor sequence" FT misc_feature 164763..164782 FT /colour=6 FT /note="ctaacttaacattcatctag, splice branch and acceptor" FT misc_feature 164885..164890 FT /colour=6 FT /note="gtatgg, splice donor sequence" FT misc_feature 164912..164930 FT /colour=6 FT /note="ttaaccttttttgtcccag, splice branch and acceptor" FT misc_feature 165060..165065 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 165085..165103 FT /colour=6 FT /note="ctaatctgttctctcttag, splice branch and acceptor" FT misc_feature 165179..165184 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 165210..165228 FT /colour=6 FT /note="ttaacaagttatgtcgtag, splice branch and acceptor" FT misc_feature 165337..165342 FT /colour=6 FT /note="gtgagc, splice donor sequence" FT misc_feature 165367..165384 FT /colour=6 FT /note="ttaacaaatcatttttag, splice branch and acceptor" FT CDS complement(165922..168525) FT /colour=7 FT /gene="SPCC320.03" FT /label=SPCC320.03 FT /note="SPCC320.03, len:866, LOW SIMILARITY:Cricetulus FT griseus, RPB1_CRIGR, DNA-directed RNA polymerase ii FT largest subunit, (467 aa), fasta scores: opt: 290, FT E():8.7e-08, (28.7% identity in 331 aa)" FT /product="putative transcriptional regulator; zinc finger FT protein; fungal binuclear cluster domain" FT /fasta_file="fasta/c320.tab.seq.04475.out" FT misc_feature complement(168172..168306) FT /colour=9 FT /note="Pfam match to entry Zn_clus PF00172, fungal Zn(2)- FT Cy s(6) binuclear cluster" FT misc_feature 175584..178518 FT /note="nominal overlap with cosmid SPCC1235, EM:AL031764 FT S. pombe chromosome 3" FT misc_feature 175584..178518 FT /note="nominal overlap with cosmid SPCC320, EM:AL022245 S. FT pombe chromosome 3" FT misc_feature 177017..177949 FT /note="Match to Biotin_synth , Score 756.53" FT CDS 179387..180586 FT /colour=8 FT /gene="SPCC1235.03" FT /label=SPCC1235.03 FT /note="SPCC1235.03, len:399" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1235.tab.seq.04434.out" FT CDS complement(join(181068..181319,181368..181776, FT 181830..181966)) FT /EC_number="2.7.7.2" FT /colour=7 FT /gene="SPCC1235.04c" FT /label=SPCC1235.04c FT /note="SPCC1235.04c, len:265, SIMILARITY:Homo sapiens, FT Q997 64, hypothetical 48.5 kD protein, (437 aa), fasta FT scores: o pt: 536, E():0, (38.7% identity in 225 FT aa)SIMILARITY: FAD1_ YEAST, FAD SYNTHETASE, (306 aa), FT fasta scores, opt:393, E() :6.3e-30, (32.5% identity in FT 274 aa overlap)" FT /product="putative FAD synthetase" FT /fasta_file="fasta/c1235.tab.seq.04435.out" FT misc_feature complement(181320..181330) FT /colour=6 FT /note="ctaaacattag, splice branch and acceptor" FT misc_feature complement(181362..181367) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(181777..181793) FT /colour=6 FT /note="ctaacgtttattacaag, splice branch and acceptor" FT misc_feature complement(181824..181829) FT /colour=6 FT /note="gtatgc, splice donor sequence" FT CDS complement(183023..186877) FT /colour=7 FT /gene="SPCC1235.05c" FT /label=SPCC1235.05c FT /note="SPCC1235.05c, len:1284, FT SIMILARITY:Schizosaccharomyces pombe, O42861, putative FT helicase., (922 aa), fasta scores: opt: 2644, E():0, FT (45.9% identity in 937 aa)" FT /product="helicase of the Snf2p family; contains DNA- FT dependent ATPase domain; possibly involved in resistance FT to UV radiation; similar to S. cerevisiae SNF2" FT /fasta_file="fasta/c1235.tab.seq.04436.out" FT misc_feature complement(183767..184018) FT /note="Match to helicase_C , Score 83.11" FT misc_feature complement(184304..185221) FT /note="Match to SNF2_N , Score 344.47" FT LTR 187086..187449 FT /colour=4 FT /note="tf1-type LTR" FT CDS join(189259..189783,189844..190092) FT /colour=10 FT /gene="SPCC1235.06" FT /label=SPCC1235.06 FT /note="SPCC1235.06, len:257" FT /note="SPCC1235.06, len:257, SIMILARITY:Saccharomyces FT cerevisiae, YER3_YEAST, hypothetical 33.9 kD protein in FT ptp3-ilv1 intergenic region., (307 aa), fasta scores: opt: FT 131, E():0.13, (27.4% identity in 186 aa)" FT /product="possibly involved in cell wall function; similar FT to S. cerevisiae YER083C" FT /fasta_file="fasta/c1235.tab.seq.04437.out" FT misc_feature 189784..189789 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 189826..189843 FT /colour=6 FT /note="ctaatatatttatttcag, splice branch and acceptor" FT CDS join(190730..190845,191023..191179,191238..191402, FT 191526..191822) FT /colour=8 FT /gene="SPCC1235.07" FT /label=SPCC1235.07 FT /note="SPCC1235.07, len:244, SIMILARITY: LOW to FT Saccharomyces cerevisiae, YG43_YEAST, hypothetical 47.3 kD FT protein, (406 aa), fasta scores: opt: 129, E():0.79, FT (23.5% identity in 196 aa)" FT /product="hypothetical protein; sequence orphan; predicted FT coiled-coil region" FT /fasta_file="fasta/c1235.tab.seq.04438.out" FT misc_feature 190846..190851 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 191002..191022 FT /colour=6 FT /note="ctaactgtgctatcgtaacag, splice branch and acceptor" FT misc_feature 191180..191185 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 191225..191237 FT /colour=6 FT /note="ctaacatttttag, splice branch and acceptor" FT misc_feature 191403..191408 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 191511..191525 FT /colour=6 FT /note="ctaatattttcttag, splice branch and acceptor" FT CDS complement(192446..193126) FT /colour=8 FT /gene="pdh1" FT /gene="SPCC1235.08c" FT /label=pdh1 FT /note="SPCC1235.08c, len:226" FT /product="hypothetical protein; sequence orphan; predicted FT N-terminal signal sequence; contains 7 predicted FT transmembrane helices; essential" FT /fasta_file="fasta/c1235.tab.seq.04439.out" FT CDS join(194552..194603,194694..195460,195499..195918, FT 195971..196426) FT /colour=7 FT /gene="SPCC1235.09" FT /label=SPCC1235.09 FT /note="SPCC1235.09, len:564, SIMILARITY:Homo sapiens, FT O6090 7, transducin, (577 aa), fasta scores: opt: 350, FT E():6.4e-2 4, (23.5% identity in 527 aa)" FT /product="WD repeat protein" FT /fasta_file="fasta/c1235.tab.seq.04440.out" FT misc_feature 194604..194609 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 194667..194693 FT /colour=6 FT /note="ttaacattatcgtgttttttgttgtag, splice branch and FT accep tor" FT misc_feature 195461..195466 FT /colour=6 FT /note="gtaagg, splice donor sequence" FT misc_feature 195488..195498 FT /colour=6 FT /note="ctaacttttag, splice branch and acceptor" FT misc_feature 195562..195678 FT /note="Match to WD40 , Score 27.15" FT misc_feature 195919..195924 FT /colour=6 FT /note="gtaaat, splice donor sequence" FT misc_feature 195955..195970 FT /colour=6 FT /note="ctaacgttttgtatag, splice branch and acceptor" FT misc_feature 196151..196240 FT /note="Match to WD40 , Score 24.10" FT CDS complement(join(196809..198830,199029..199133, FT 199196..199223,199279..199316)) FT /colour=7 FT /gene="sec6" FT /gene="SPCC1235.10c" FT /label=sec6 FT /note="SPCC1235.10c, len:730, SIMILARITY:Saccharomyces FT cerevisiae, SEC6_YEAST, exocyst complex component sec6., FT (805 a a), fasta scores: opt: 345, E():0, (22.4% identity FT in 714 a a)" FT /product="putative exocyst complex component" FT /fasta_file="fasta/c1235.tab.seq.04441.out" FT misc_feature complement(198831..198851) FT /colour=6 FT /note="ctaatgttgatttttttttag, splice branch and acceptor" FT misc_feature complement(199023..199028) FT /colour=6 FT /note="gttagc, splice donor sequence" FT misc_feature complement(199134..199153) FT /colour=6 FT /note="ctaacaattgatgattttag, splice branch and acceptor" FT misc_feature complement(199190..199195) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(199224..199236) FT /colour=6 FT /note="ctaactttgtcag, splice branch and acceptor" FT misc_feature complement(199273..199278) FT /colour=6 FT /note="gtaagg, splice donor sequence" FT CDS join(200130..200131,200172..200276,200365..200459, FT 200643..200683,200750..200844,200900..200987) FT /colour=10 FT /gene="SPCC1235.11" FT /label=SPCC1235.11 FT /note="SPCC1235.11, len:141, SIMILARITY:Saccharomyces FT cerevisiae, YGI0_YEAST, hypothetical 15.0 kD protein, (130 FT aa), fasta scores: opt: 423, E():1.2e-25, (53.8% identity FT in 117 aa)" FT /product="conserved protein; similar to S. cerevisiae FT YGL080W" FT /fasta_file="fasta/c1235.tab.seq.04442.out" FT intron 200132..200171 FT /note="confirmed" FT mRNA 200160..200167 FT /colour=3 FT /note="mRNA from AU009953 1 8" FT misc_feature 200277..200282 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT intron 200277..200364 FT /colour=2 FT /note="confirmed intron" FT misc_feature 200353..200364 FT /colour=6 FT /note="ctaataagatag, splice branch and acceptor" FT misc_feature 200460..200465 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT intron 200460..200642 FT /colour=2 FT /note="confirmed intron" FT misc_feature 200630..200642 FT /colour=6 FT /note="ttaatctccttag, splice branch and acceptor" FT misc_feature 200684..200689 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT intron 200684..200749 FT /colour=2 FT /note="confirmed intron" FT misc_feature 200735..200749 FT /colour=6 FT /note="ctaactagcgtttag, splice branch and acceptor" FT misc_feature 200845..200850 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 200880..200899 FT /colour=6 FT /note="ctaacgacttatttaattag, splice branch and acceptor" FT CDS complement(201772..202707) FT /colour=8 FT /gene="SPCC1235.12c" FT /label=SPCC1235.12c FT /note="SPCC1235.12c, len:311" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1235.tab.seq.04443.out" FT CDS 204733..206340 FT /colour=2 FT /gene="ght6" FT /gene="meu12" FT /gene="SPCC1235.13" FT /label=ght6 FT /note="SPCC1235.13, len:535" FT /product="MFS glucose transporter; meiotic expression FT upregulated" FT /fasta_file="fasta/c1235.tab.seq.04444.out" FT misc_feature 204757..206139 FT /colour=9 FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT oth er) transporters" FT misc_feature 204763..206139 FT /note="Match to sugar_tr , Score 524.93" FT misc_feature 206341..212313 FT /note="low complexity gene free region" FT CDS 212313..213953 FT /colour=2 FT /gene="ght5" FT /gene="SPCC1235.14" FT /label=ght5 FT /note="SPCC1235.14, len:546" FT /product="MFS glucose transporter" FT /fasta_file="fasta/c1235.tab.seq.04445.out" FT misc_feature 212337..213713 FT /colour=9 FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT oth er) transporters" FT misc_feature 212343..213713 FT /note="Match to sugar_tr , Score 499.82" FT misc_feature 215601..215606 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 215830..215849 FT /colour=6 FT /note="ctaatccttcattcctttag, splice branch and acceptor" FT misc_feature 216079..216084 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 216169..216186 FT /colour=6 FT /note="ctaaccttatgctattag, splice branch and acceptor" FT misc_feature 216363..216463 FT /note="nominal overlap with SPCC1235 AL031764 S.pombe FT chromosome III" FT LTR complement(218342..218642) FT /note="Tf1-type LTR" FT CDS complement(join(219185..219261,219294..219368, FT 219409..219684,219734..219979,220148..220283)) FT /colour=4 FT /gene="wtf11-pseudo" FT /gene="meu9" FT /gene="SPCC548.02c" FT /label=wtf11-pseudo FT /note="SPCC548.02c, len:269, FT SIMILARITY:Schizosaccharomyces pombe, O74838, hypothetical FT wtf protein., (258 aa), fasta scores: opt: 1201, E():0, FT (74.4% identity in 270 aa)" FT /product="wtf11-pseudo -no Met" FT /pseudo FT /fasta_file="fasta/c548.tab.seq.05383.out" FT misc_feature complement(219262..219275) FT /colour=6 FT /note="ctaattatttttag, splice branch and acceptor" FT misc_feature complement(219288..219293) FT /colour=6 FT /note="gtactt, splice donor sequence" FT misc_feature complement(219369..219380) FT /colour=6 FT /note="ctgacaacatag, splice branch and acceptor" FT misc_feature complement(219403..219408) FT /colour=6 FT /note="gtttgt, splice donor sequence" FT misc_feature complement(219685..219696) FT /colour=6 FT /note="ctaactcattag, splice branch and acceptor" FT misc_feature complement(219728..219733) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(219980..219992) FT /colour=6 FT /note="ttaatttaaacag, splice branch and acceptor" FT misc_feature complement(220142..220147) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT CDS complement(join(221199..221335,221395..221457, FT 221498..221689,221726..222016,222065..222337, FT 222566..222701)) FT /colour=3 FT /gene="wtf13" FT /gene="SPCC548.03c" FT /label=wtf13 FT /note="SPCC548.03c, len:363, FT SIMILARITY:Schizosaccharomyces pombe, O74420, hypothetical FT wtf5 protein., (418 aa), fasta scores: opt: 1154, E():0, FT (82.8% identity in 418 aa)" FT /product="hypothetical wtf protein" FT /fasta_file="fasta/c548.tab.seq.05384.out" FT misc_feature complement(221336..221357) FT /colour=6 FT /note="cttacccgactaggaggtttag, splice branch and acceptor" FT misc_feature complement(221389..221394) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(221458..221470) FT /colour=6 FT /note="ctaaccataccag, splice branch and acceptor" FT intron complement(221458..221497) FT /colour=2 FT /note="confirmed by mRNA" FT misc_feature complement(221492..221497) FT /colour=6 FT /note="gttcgt, splice donor sequence" FT misc_feature complement(221690..221700) FT /colour=6 FT /note="ctaacatacag, splice branch and acceptor" FT intron complement(221690..221725) FT /colour=2 FT /note="confirmed by mRNA" FT misc_feature complement(221720..221725) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(222017..222028) FT /colour=6 FT /note="ctaactcattag, splice branch and acceptor" FT misc_feature complement(222059..222064) FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature complement(222338..222350) FT /colour=6 FT /note="ttaatgctttcag, splice branch and acceptor" FT misc_feature complement(222560..222565) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT LTR complement(222987..223246) FT /note="Tf2-type LTR" FT CDS join(223385..223407,223451..223603,223687..223852) FT /colour=7 FT /gene="SPCC548.04" FT /label=SPCC548.04 FT /note="SPCC548.04, len:113, SIMILARITY:Saccharomyces FT cerevisiae, YIA8_YEAST, hypothetical 11.0 kD protein in FT faa3-mas3 intergenic region., (99 aa), fasta scores: opt: FT 292, E():5.5e-14, (44.2% identity in 95 aa)" FT /product="putative ubiquitin-related protein; similarity FT to S. cerevisiae URM1" FT /fasta_file="fasta/c548.tab.seq.05385.out" FT misc_feature 223408..223413 FT /colour=6 FT /note="gtaggt, splice donor sequence" FT misc_feature 223434..223450 FT /colour=6 FT /note="gtaacctattattgtag, splice branch and acceptor" FT misc_feature 223604..223609 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 223670..223686 FT /colour=6 FT /note="ctaacacttccctgcag, splice branch and acceptor" FT CDS complement(join(224087..225172,225323..225643)) FT /colour=7 FT /gene="SPCC548.05c" FT /label=SPCC548.05c FT /note="SPCC548.05c, len:468, SIMILARITY:Caenorhabditis FT elegans., Q22463, similar to zinc finger containing FT protein. ncbi gi: 1049400., (2447 aa), fasta scores: opt: FT 235, E():1.7e-06, (25.1% identity in 355 aa)" FT /product="zinc finger protein; zf-C3HC4 type (RING finger)" FT /fasta_file="fasta/c548.tab.seq.05386.out" FT misc_feature complement(join(225128..225172,225323..225391)) FT /note="Match to PF00097 zf-C3HC4, zinc finger, C3HC4 type FT (RING finger) Score 35.78" FT misc_feature complement(225173..225183) FT /colour=6 FT /note="ctaataaatag, splice branch and acceptor" FT misc_feature complement(225317..225322) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS complement(226757..228400) FT /colour=7 FT /gene="SPCC548.06c" FT /label=SPCC548.06c FT /note="SPCC548.06c, len:547" FT /product="putative glucose transporter protein; highly FT similar to ght5" FT /fasta_file="fasta/c548.tab.seq.05387.out" FT misc_feature complement(227000..228370) FT /note="Match to PF00083 sugar_tr, Sugar (and other) FT transporter Score 491.66" FT misc_feature 228401..232833 FT /note="gene free region" FT misc_feature complement(232551..232671) FT /note="region in 3' UTR 97 % conserved between pombe ght1 FT S.pombe GHT1 gene" FT CDS complement(232834..234507) FT /colour=2 FT /gene="ght1" FT /gene="SPCC548.07c" FT /label=ght1 FT /note="SPCC548.07c, len:557, FT SIMILARITY:Schizosaccharomyces pombe, P78831, putative FT glucose transporter protein., (546 aa), fasta scores: opt: FT 2842, E():0, (78.3% identity in 529 aa)" FT /product="putative glucose transporter protein" FT /fasta_file="fasta/c548.tab.seq.05388.out" FT misc_feature complement(233107..234477) FT /note="Match to PF00083 sugar_tr, Sugar (and other) FT transporter Score 499.31" FT misc_feature 234853..234953 FT /note="nominal overlap with SPCC1529 AL132664 S.pombe FT chromosome III cosmid c1529." FT misc_feature 234853..237553 FT /note="low-complexity gene-free region" FT misc_feature 237686..238939 FT /colour=9 FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT other) transporter," FT misc_feature 237924..237929 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 237958..237974 FT /colour=6 FT /note="ctaaccttttgtcaaag, splice branch and acceptor" FT misc_feature 238081..238086 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 238119..238138 FT /colour=6 FT /note="ctaacgttttctttattcag, splice branch and acceptor" FT misc_feature 238534..238539 FT /colour=6 FT /note="gtaggt, splice donor sequence" FT misc_feature 238575..238587 FT /colour=6 FT /note="cttaccgttatag, splice branch and acceptor" FT misc_feature 239002..239102 FT /note="nominal overlap with cosmid SPCC794, EM:AL023595 S. FT pombe chromosome 3" FT misc_feature 239002..239102 FT /note="nominal overlap with cosmid SPCC1529, EM:AL132664 FT S. pombe chromosome 3" FT CDS complement(239781..241208) FT /colour=7 FT /gene="SPCC794.01c" FT /label=SPCC794.01c FT /note="SPCC794.01c, len:475, SIMILARITY:Emericella FT nidulans, G6PD_EMENI, glucose-6-phosphate 1-dehydrogenase, FT (511 aa), fasta scores: opt: 1276, E():0, (42.1% identity FT in 466 aa)" FT /product="glucose-6-phosphate 1-dehydrogenase" FT /fasta_file="fasta/c794.tab.seq.04670.out" FT misc_feature complement(239829..241196) FT /colour=9 FT /note="Pfam match to entry G6PD PF00479, Glucose-6- FT phosphat e dehydrogenase" FT CDS join(243855..243993,244160..244405,244455..244760, FT 244802..244843,244893..244969) FT /colour=3 FT /gene="wtf4" FT /gene="SPCC794.02" FT /label=wtf4 FT /note="SPCC794.02, len:269" FT /product="hypothetical wtf protein" FT /fasta_file="fasta/c794.tab.seq.04671.out" FT misc_feature 243994..243999 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 244147..244159 FT /colour=6 FT /note="ttaatttaaacag, splice branch and acceptor" FT misc_feature 244406..244411 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 244443..244454 FT /colour=6 FT /note="ctaattcattag, splice branch and acceptor" FT misc_feature 244761..244766 FT /colour=6 FT /note="gtttgt, splice donor sequence" FT misc_feature 244790..244801 FT /colour=6 FT /note="ttaacaatacag, splice branch and acceptor" FT misc_feature 244844..244849 FT /colour=6 FT /note="gtaaat, splice donor sequence" FT misc_feature 244879..244892 FT /colour=6 FT /note="ctaattatcattag, splice branch and acceptor" FT CDS 245964..247628 FT /colour=7 FT /gene="SPCC794.03" FT /label=SPCC794.03 FT /note="SPCC794.03, len:554, SIMILARITY:Schizosaccharomyces FT pombe, CAB57428, putative amino acid permease, SPAC9.10, FT (591 aa), fasta scores: opt: 807, E():0, (47.2% identity FT in 553 aa)" FT /product="APC amino acid transporter" FT /fasta_file="fasta/c794.tab.seq.04672.out" FT misc_feature 246495..247295 FT /colour=9 FT /note="Pfam match to entry aa_permeases PF00324, Amino FT acid permeases" FT CDS complement(248551..250194) FT /colour=7 FT /gene="SPCC794.04c" FT /label=SPCC794.04c FT /note="SPCC794.04c, len:547, FT SIMILARITY:Schizosaccharomyces pombe, O59738, major FT facilitator family protein., (541 aa), fasta scores: opt: FT 1865, E():0, (55.2% identity in 473 aa)" FT /product="MFS drug efflux transporter of unknown FT specificity" FT /fasta_file="fasta/c794.tab.seq.04673.out" FT misc_feature complement(248560..249867) FT /colour=9 FT /note="Pfam match to entry sugar_tr PF00083, Sugar (and FT oth er) transporters" FT misc_feature 250194..254495 FT /note="low complexity gene-free region" FT LTR complement(254350..254629) FT /note="Tf2-type LTR" FT CDS complement(254496..256300) FT /colour=4 FT /gene="SPCC794.05c" FT /label=SPCC794.05c FT /note="SPCC794.05c, pseudogene; degraded Tf2 FT retrotransposable element" FT /product="degraded Tf2 retrotransposable element" FT /pseudo FT /fasta_file="fasta/c794.tab.seq.04674.out" FT misc_feature complement(256363..256950) FT /colour=8 FT /fasta_file="fasta/c794.tab.seq.00007.out" FT /gene="SPCC794.14c" FT /label=SPCC794.14c FT /note="SPCC794.14c, len:195" FT /product="spurious ORF; transposon fragment" FT LTR complement(257183..257531) FT /note="Tf2-type LTR" FT CDS 260437..261732 FT /colour=7 FT /gene="SPCC794.06" FT /label=SPCC794.06 FT /note="SPCC794.06, len:431, SIMILARITY:Schizosaccharomyces FT pombe, MAE1_SCHPO, malic acid transport protein, (438 aa), FT fasta scores: opt: 1514, E():0, (54.9% identity in 384 aa)" FT /product="TDT malic acid transporter; no apparent S. FT cerevisiae ortholog" FT /fasta_file="fasta/c794.tab.seq.04675.out" FT misc_feature 261679..261702 FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS join(262811..262884,262971..263041,263093..264399) FT /EC_number="2.3.1.12" FT /colour=7 FT /gene="SPCC794.07" FT /label=SPCC794.07 FT /note="SPCC794.07, len:483, predicted transit peptide 1- FT 45aa, SIMILARITY:Rattus norvegicus, ODP2_RAT, FT dihydrolipoamide acetyltransferase component of pyruvate FT dehydrogenasecomplex, (555 aa), fasta scores: opt: 1387, FT E():0, (48.2% identity in 454 aa)" FT /product="dihydrolipoamide acetyltransferase component of FT pyruvate dehydrogenase complex" FT /fasta_file="fasta/c794.tab.seq.04676.out" FT misc_feature 262885..262890 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 262956..262970 FT /colour=6 FT /note="ctaatcagtgtgcag, splice branch and acceptor" FT misc_feature 263042..263047 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 263077..263092 FT /colour=6 FT /note="ctaacagttaccatag, splice branch and acceptor" FT misc_feature 263107..263328 FT /note="Match to PF00364 biotin_lipoyl, Biotin-requiring FT enzymes Score 63.65" FT misc_feature 263179..263268 FT /colour=8 FT /note="PS00189 2-oxo acid dehydrogenases acyltransferase FT co mponent lipoyl binding site" FT misc_feature 263737..264396 FT /note="Match to PF00198 2-oxoacid_dh, 2-oxo acid FT dehydrogenases acyltransferase (catalytic domain) Score FT 344.46" FT CDS join(265445..265644,265685..267881) FT /colour=10 FT /gene="SPCC794.08" FT /label=SPCC794.08 FT /note="SPCC794.08, len:798, LOW SIMILARITY:Saccharomyces FT cerevisiae, YM62_YEAST, hypothetical 89.2 kD protein in FT rar1-scj1 intergenic region., (782 aa), fasta scores: opt: FT 275, E():2.1e-10, (27.0% identity in 463 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT EFR3; similar to Drosophila cmp44E, conserved, ubiquitous FT membrane protein requiired for cell viability" FT /fasta_file="fasta/c794.tab.seq.04677.out" FT misc_feature 265645..265650 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 265671..265684 FT /colour=6 FT /note="ctaaatgtttttag, splice branch and acceptor" FT CDS complement(268097..269479) FT /colour=2 FT /gene="tef1-e" FT /gene="ef1a-e" FT /gene="SPCC794.09c" FT /label=ef1a-e FT /note="SPCC794.09c, len:460" FT /product="elongation factor 1-alpha-e" FT /fasta_file="fasta/c794.tab.seq.04678.out" FT misc_feature complement(268235..269467) FT /colour=9 FT /note="Pfam match to entry GTP_EFTU PF00009, Elongation FT fac tor Tu family (contains ATP/GTP binding loop P" FT misc_feature complement(268805..268828) FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature complement(269252..269299) FT /colour=8 FT /note="PS00301 GTP-binding elongation factors signature" FT misc_feature complement(269417..269440) FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS 270966..272465 FT /EC_number="2.7.7.9" FT /colour=7 FT /gene="SPCC794.10" FT /label=SPCC794.10 FT /note="SPCC794.10, len:499, SIMILARITY:Schizosaccharomyces FT pombe, CAA22857, putative utp--glucose-1-phosphate FT uridylyltransferase, SPCC1322.04, (506 aa), fasta scores: FT opt: 1773, E():0, (53.4% identity in 498 aa)" FT /product="putative utp--glucose-1-phosphate FT uridylyltransferase" FT /fasta_file="fasta/c794.tab.seq.04679.out" FT CDS complement(273167..274597) FT /EC_number="1.1.1.38" FT /colour=7 FT /gene="SPCC794.11c" FT /label=SPCC794.11c FT /note="SPCC794.11c, len:476, SIMILARITY:Saccharomyces FT cerevisiae, YJ95_YEAST, hypothetical 45.1 kD protein in FT rps5-zms1 intergenic region., (408 aa), fasta scores: opt: FT 756, E():0, (37.6% identity in 460 aa)" FT /product="ENTH domain protein; putative actin binding FT protein" FT /fasta_file="fasta/c794.tab.seq.04680.out" FT misc_feature complement(274136..274510) FT /note="Match to PF01417 ENTH, ENTH domain Score 170.15" FT CDS complement(275514..277211) FT /colour=2 FT /gene="mae2" FT /gene="SPCC794.12c" FT /label=mae2 FT /note="SPCC794.12c, len:565" FT /product="malate oxidoreductase [nad]" FT /fasta_file="fasta/c794.tab.seq.04681.out" FT misc_feature complement(275517..277169) FT /note="Match to PF00390 malic, Malic enzyme Score 1232.37" FT misc_feature complement(276357..276407) FT /colour=8 FT /note="PS00331 Malic enzymes signature" FT CDS join(278906..278983,279027..279209) FT /colour=9 FT /gene="SPCC794.15" FT /label=SPCC794.15 FT /note="SPCC794.15, len:86 aa" FT /product="very hypothetical protein" FT /fasta_file="fasta/c794.tab.seq.04682.out" FT misc_feature complement(279735..279898) FT /note="nominal overlap with cosmid SPCC553, EM:AL023704 S. FT pombe chromosome 3" FT misc_feature 279735..279898 FT /note="nominal overlap with cosmid SPCC794, EM:AL023595 S. FT pombe chromosome 3" FT CDS join(281902..281936,282056..282137,282204..282410) FT /colour=7 FT /gene="SPCC553.11c" FT /label=SPCC553.11c FT /note="SPCC553.11c, len:107, SIMILARITY:Arabidopsis FT thaliana, O49348, transcription factor iia small subunit., FT (106 aa), fasta scores: opt: 358, E():2e-20, (49.5% FT identity in 99 aa)" FT /product="putative transcription initiation factor TFIIA FT small subunit" FT /fasta_file="fasta/c553.tab.seq.04697.out" FT misc_feature 281937..281942 FT /colour=6 FT /note="gtactt, splice donor sequence" FT misc_feature 282041..282055 FT /colour=6 FT /note="ctgacacatttgtag, splice branch and acceptor" FT misc_feature 282138..282143 FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature 282182..282203 FT /colour=6 FT /note="ctaatctcacaatttgatatag, splice branch and acceptor" FT CDS complement(283422..284471) FT /colour=8 FT /gene="SPCC553.10" FT /label=SPCC553.10 FT /note="SPCC553.10, len:349, SIMILARITY:Schizosaccharomyces FT pombe, O94549, hypothetical serine-rich protein., (262 aa), FT fasta scores: opt: 383, E():7.5e-12, (38.1% identity in FT 223 aa)" FT /product="hypothetical protein; sequence orphan; predicted FT N-terminal signal sequence; similar to other cell surface FT proteins; serine-rich protein" FT /fasta_file="fasta/c553.tab.seq.04698.out" FT LTR complement(286728..287053) FT /colour=4 FT /note="degraded tf2-type LTR" FT CDS join(287640..287905,287947..288925,288968..289276, FT 289316..289486) FT /colour=7 FT /gene="SPCC553.09c" FT /label=SPCC553.09c FT /note="SPCC553.09c, len:574, SIMILARITY:Homo sapiens, FT DPO2_HUMAN, DNA polymerase alpha 70 kD subunit, (598 aa), FT fasta scores: opt: 625, E():5e-32, (29.1% identity in 522 FT aa)" FT /product="putative DNA polymerase alpha 70 kD subunit" FT /fasta_file="fasta/c553.tab.seq.04699.out" FT misc_feature 287906..287911 FT /colour=6 FT /note="gtgcgt, splice donor sequence" FT misc_feature 287932..287946 FT /colour=6 FT /note="ctaacaaatatctag, splice branch and acceptor" FT misc_feature 288926..288931 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 288953..288967 FT /colour=6 FT /note="ttgaccaatccatag, splice branch and acceptor" FT misc_feature 289277..289282 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT intron 289277..289315 FT /colour=2 FT /note="confirmed intron" FT misc_feature 289304..289315 FT /colour=6 FT /note="ctaatgttatag, splice branch and acceptor" FT CDS join(289912..290007,290063..292215,292261..293014) FT /colour=7 FT /gene="SPCC553.08c" FT /label=SPCC553.08c FT /note="SPCC553.08c, len:1000, SIMILARITY:Saccharomyces FT cerevisiae, YNQ3_YEAST, hypothetical 124.5 kD protein in FT sko1-rpl44a intergenic region., (1110 aa), fasta scores: FT opt: 1598, E():0, (44.6% identity in 1127 aa)" FT /product="elongation factor 2-like protein" FT /fasta_file="fasta/c553.tab.seq.04700.out" FT misc_feature join(289960..290007,290063..290970,291337..291889) FT /note="Match to PF00009 GTP_EFTU, Elongation factor Tu FT family Score 265.59" FT misc_feature 290008..290013 FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature 290046..290062 FT /colour=6 FT /note="ctaatgattaattaaag, splice branch and acceptor" FT misc_feature 292216..292221 FT /colour=6 FT /note="gtaggt, splice donor sequence" FT misc_feature 292248..292260 FT /colour=6 FT /note="ctaacaatactag, splice branch and acceptor" FT misc_feature 292343..292849 FT /note="Match to PF00679 EFG_C, Elongation factor G C- FT terminus Score 84.37" FT CDS join(293444..293936,293976..294415,294462..295010) FT /colour=7 FT /gene="SPCC553.07c" FT /label=SPCC553.07c FT /note="SPCC553.07c, len:493, SIMILARITY:Escherichia coli., FT DINP_ECOLI, DNA-damage-inducible protein p., (351 aa), FT fasta scores: opt: 529, E():8.1e-27, (33.8% identity in FT 349 aa)" FT /product="putative translesion DNA repair polymerase; no FT apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c553.tab.seq.04701.out" FT misc_feature join(293846..293936,293976..294415,294462..294929) FT /note="Match to PF00817 IMS, impB/mucB/samB family Score FT 166.24" FT misc_feature 293937..293942 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 293961..293975 FT /colour=6 FT /note="ctaatgctgaataag, splice branch and acceptor" FT misc_feature 294416..294421 FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature 294450..294461 FT /colour=6 FT /note="ttaacattacag, splice branch and acceptor" FT CDS complement(join(295482..295967,296068..296266, FT 296357..296487)) FT /colour=8 FT /gene="SPCC553.06" FT /label=SPCC553.06 FT /note="SPCC553.06, len:271" FT /product="hypothetical protein; sequence orphan; contains FT predicted N-terminal signal sequence; contains 2 predicted FT transmembrane helices" FT /fasta_file="fasta/c553.tab.seq.04702.out" FT misc_feature complement(295968..295979) FT /colour=6 FT /note="ctaaccttatag, splice branch and acceptor" FT misc_feature complement(296062..296067) FT /colour=6 FT /note="gtacgc, splice donor sequence" FT misc_feature complement(296267..296287) FT /colour=6 FT /note="ctaactctcttatctctttag, splice branch and acceptor" FT misc_feature complement(296351..296356) FT /colour=6 FT /note="gtaggt, splice donor sequence" FT CDS complement(join(297140..297216,297266..297308, FT 297384..297655,297705..297950,298119..298258)) FT /colour=4 FT /gene="wtf2-pseudo" FT /gene="SPCC553.05" FT /label=wtf2-pseudogene FT /product="wtf-pseudo" FT /pseudo FT /fasta_file="fasta/c553.tab.seq.04703.out" FT LTR complement(298547..298890) FT /note="tf2 type LTR" FT LTR 298890..299217 FT /note="Tf2-type LTR" FT CDS complement(join(300340..302102,302158..302227)) FT /colour=2 FT /gene="cyp9" FT /gene="SPCC553.04" FT /label=cyp9 FT /note="SPCC553.04, len:610, SIMILARITY:Homo sapiens, FT Q15002, kiaa0073 protein, (645 aa), fasta scores: opt: FT 1478, E():0, (40.8% identity in 598 aa)" FT /product="cyclophilin-9; peptidyl-prolyl cis-trans FT isomerase; no apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c553.tab.seq.04704.out" FT misc_feature complement(300349..300792) FT /note="Match to PF00160 pro_isomerase, Cyclophilin type FT peptidyl-prolyl cis-trans isomerase Score 218.84" FT misc_feature complement(300649..300702) FT /note="PS00170 Cyclophilin-type peptidyl-prolyl cis-trans FT i somerase signature" FT misc_feature complement(301819..301923) FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 20.48" FT misc_feature complement(302103..302122) FT /note="ctgatgctttgtactattag, splice branch and acceptor" FT misc_feature complement(302152..302157) FT /note="gtaagt, splice donor sequence" FT CDS complement(join(302352..304934,304980..305210)) FT /colour=7 FT /gene="SPCC553.03" FT /label=SPCC553.03 FT /note="SPCC553.03, len:937, SIMILARITY:Pichia pastoris, FT PEX 1_PICPA, peroxisome biosynthesis protein pas1, (1157 FT aa), f asta scores: opt: 1005, E():0, (30.3% identity in FT 1161 aa)" FT /product="putative peroxisome biosynthesis protein; AAA FT family ATPase" FT /fasta_file="fasta/c553.tab.seq.04705.out" FT misc_feature complement(302733..303287) FT /note="Pfam match to entry AAA PF00004, ATPases FT associatedw ith various cellular activities (AAA)" FT misc_feature complement(303204..303227) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature complement(303516..304091) FT /note="Pfam match to entry AAA PF00004, ATPases FT associatedw ith various cellular activities (AAA)" FT misc_feature complement(304008..304031) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature complement(304935..304946) FT /note="ctaatctcttag, splice branch and acceptor" FT misc_feature complement(304974..304979) FT /note="gtaaaa, splice donor sequence" FT CDS complement(join(305988..306194,306247..306574, FT 306624..307035,307082..308091,308292..308408, FT 308453..308481)) FT /EC_number="6.3.5.1" FT /colour=7 FT /gene="SPCC553.02" FT /label=SPCC553.02 FT /note="SPCC553.02, len:700, SIMILARITY:Saccharomyces FT cerevisiae, YHN4_YEAST, hypothetical 80.7 kD protein in FT erg7-nmd2 intergenic region., (714 aa), fasta scores: opt: FT 2952, E():0, (60.4% identity in 705 aa)" FT /product="putative glutamine-dependent NAD(+) synthetase; FT conserved in eukaryotes; similar to S. cerevisiae YHR074W" FT /fasta_file="fasta/c553.tab.seq.04706.out" FT misc_feature complement(306195..306207) FT /note="ctaactttataag, splice branch and acceptor" FT misc_feature complement(306241..306246) FT /note="gtaagt, splice donor sequence" FT misc_feature complement(306575..306590) FT /note="ctgacaaatttacaag, splice branch and acceptor" FT misc_feature complement(306618..306623) FT /note="gtatgc, splice donor sequence" FT misc_feature complement(307036..307056) FT /note="ctaattactgaccttcaatag, splice branch and acceptor" FT misc_feature complement(307076..307081) FT /note="gtaagt, splice donor sequence" FT misc_feature complement(308092..308107) FT /note="ttaacaaacgcattag, splice branch and acceptor" FT misc_feature complement(308286..308291) FT /note="gtatgt, splice donor sequence" FT misc_feature complement(308409..308421) FT /note="ctaacttctgtag, splice branch and acceptor" FT misc_feature complement(308447..308452) FT /note="gtatgc, splice donor sequence" FT misc_feature 311529..311709 FT /note="nominal overlap with cosmid SPCC736, EM:AL023705 S. FT pombe chromosome 3" FT misc_feature complement(311529..311709) FT /note="nominal overlap with cosmid SPCC553, EM:AL023704 S. FT pombe chromosome 3" FT CDS 313183..314043 FT /colour=8 FT /gene="SPCC736.02" FT /label=SPCC736.02 FT /note="SPCC736.02, len:286" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c736.tab.seq.04559.out" FT CDS complement(314364..315653) FT /colour=7 FT /gene="SPCC736.03c" FT /label=SPCC736.03c FT /note="SPCC736.03c, len:429, potential transit peptide 1- FT 23 aa, SIMILARITY:Saccharomyces cerevisiae, SYFM_YEAST, FT phenylalanyl-tRNA synthetase, mitochondrial , (474 aa), FT fasta scores: opt: 769, E():0, (43.8% identity in 441 aa)" FT /product="phenylalanyl-tRNA synthetase, mitochondrial" FT /fasta_file="fasta/c736.tab.seq.04560.out" FT misc_feature complement(314712..314930) FT /note="Match to PF01409 tRNA-synt_2d, tRNA synthetases FT class II (F) Score 80.50" FT misc_feature complement(314736..314765) FT /colour=8 FT /note="PS00339 Aminoacyl-transfer RNA synthetases class- FT IIs ignature 2" FT misc_feature complement(315174..315506) FT /note="Match to PF01409 tRNA-synt_2d, tRNA synthetases FT class II (F) Score 29.47" FT misc_feature complement(315177..315230) FT /colour=8 FT /note="PS00179 Aminoacyl-transfer RNA synthetases class- FT IIs ignature 1" FT CDS complement(316725..317852) FT /colour=2 FT /gene="gma12" FT /gene="SPCC736.04c" FT /label=gma12 FT /note="SPCC736.04c, len:375" FT /product="alpha-1,2-galactosyltransferase" FT /fasta_file="fasta/c736.tab.seq.04561.out" FT CDS join(320617..320755,320964..321335,321387..321509, FT 321554..321582) FT /colour=10 FT /gene="SPCC736.05" FT /label=SPCC736.05 FT /note="SPCC736.05, len:220, May be a wtf pseudogene?, FT SIMILARITY:Schizosaccharomyces pombe, O74494, hypothetical FT wtfw protein., (262 aa), fasta scores: opt: 160, FT E():0.00084, (26.7% identity in 202 aa)" FT /product="hypothetical wtf-like protein; possibly S. pombe FT specific" FT /fasta_file="fasta/c736.tab.seq.04562.out" FT misc_feature 320756..320761 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 320941..320963 FT /colour=6 FT /note="ctaatattttttttctttttcag, splice branch and acceptor" FT misc_feature 321336..321341 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 321375..321386 FT /colour=6 FT /note="ttaacttaatag, splice branch and acceptor" FT misc_feature 321510..321515 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 321540..321553 FT /colour=6 FT /note="ttgactgtgagtag, splice branch and acceptor" FT CDS 323032..324867 FT /colour=7 FT /gene="SPCC736.06" FT /label=SPCC736.06 FT /note="SPCC736.06, len:611, predicted transit peptide 1-32 FT aa, SIMILARITY:Bacillus subtilis., SYD_BACSU, aspartyl- FT tRNA synthetase, (592 aa), fasta scores: opt: 1146, E():0, FT (35.1% identity in 612 aa)" FT /product="aspartyl-tRNA synthetase, mitochondrial" FT /fasta_file="fasta/c736.tab.seq.04563.out" FT misc_feature join(323464..324097,324409..324458) FT /note="Match to PF00152 tRNA-synt_2, tRNA synthetases FT class II (D, K and N) Score 22.60" FT misc_feature 324463..324765 FT /note="Match to PF00152 tRNA-synt_2, tRNA synthetases FT class II (D, K and N) Score 62.89" FT CDS complement(join(324921..326872,326947..327094)) FT /colour=8 FT /gene="SPCC736.07c" FT /label=SPCC736.07c FT /note="SPCC736.07c, len:699" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c736.tab.seq.04564.out" FT misc_feature complement(326873..326894) FT /colour=6 FT /note="ctaattgctaatgaaaatccag, splice branch and acceptor" FT misc_feature complement(326941..326946) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT CDS join(327542..327623,327702..329461) FT /colour=7 FT /gene="SPCC736.08" FT /label=SPCC736.08 FT /note="SPCC736.08, len:613, SIMILARITY:Drosophila FT melanogaster, RBJK_DROME, j kappa-recombination signal FT binding protein, (594 aa), fasta scores: opt: 406, FT E():1.4e-18, (25.5% identity in 455 aa)" FT /product="putative recombination signal specific DNA FT binding protein; no apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c736.tab.seq.04565.out" FT misc_feature 327624..327629 FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature 327681..327701 FT /colour=6 FT /note="tagctaacggatttttctag, splice branch and acceptor" FT CDS complement(329749..330444) FT /colour=7 FT /gene="SPCC736.09c" FT /label=SPCC736.09c FT /note="SPCC736.09c, len:231, SIMILARITY:Homo sapiens, FT TSNX_HUMAN, translin-associated protein x, (290 aa), fasta FT scores: opt: 252, E():6.6e-10, (32.2% identity in 242 aa)" FT /product="similar to translin-associated protein x; FT possibly involved in recombination and repair; no apparent FT S. cerevisiae ortholog" FT /fasta_file="fasta/c736.tab.seq.04566.out" FT tRNA complement(331228..331300) FT /note="tRNA Phe anticodon GAA, Cove score 69.56" FT CDS complement(332025..332483) FT /colour=7 FT /gene="SPCC736.10c" FT /label=SPCC736.10c FT /note="SPCC736.10c, len:152, predicted prenylation motif FT at C-term, SIMILARITY:Saccharomyces cerevisiae, YM33_YEAST, FT hypothetical 17.5 kD protein in imp1-hlj1 intergenic FT region., (155 aa), fasta scores: opt: 389, E():5.8e-21, FT (38.8% identity in 152 aa)" FT /product=" weak similarity to E. coli ribosomal protein S8" FT /fasta_file="fasta/c736.tab.seq.04567.out" FT CDS join(334137..334265,334637..337012) FT /colour=7 FT /gene="SPCC736.11" FT /label=SPCC736.11 FT /note="SPCC736.11, len:834, SIMILARITY:Homo sapiens, FT AAF00068, putative RNA-binding protein q99., (857 aa), FT fasta scores: opt: 1481, E():0, (32.7% identity in 841 aa)" FT /product="translation initiation factor eIF2c; argonaute; FT Piwi and ZAP domains; no apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c736.tab.seq.04568.out" FT misc_feature 334266..334271 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 334618..334636 FT /colour=6 FT /note="ttaacgccttttgttgtag, splice branch and acceptor" FT mRNA 337118..337239 FT /colour=3 FT /note="mRNA from AU013369 445 324" FT misc_feature 337240..338589 FT /colour=2 FT /note="was predicted as a confirmed intron by ESTgenome, FT but doesn't conform to intron architecture- putative FT deleted EST?" FT CDS complement(join(338026..338178,338232..338347, FT 338395..339354,339483..339567)) FT /colour=8 FT /gene="SPCC736.12c" FT /label=SPCC736.12c FT /note="SPCC736.12c, len:400" FT /product="hypothetical protein; sequence orphan; serine- FT rich protein" FT /fasta_file="fasta/c736.tab.seq.04569.out" FT misc_feature complement(338179..338193) FT /colour=6 FT /note="ctaacactttaacag, splice branch and acceptor" FT misc_feature complement(338226..338231) FT /colour=6 FT /note="gtttgt, splice donor sequence" FT misc_feature complement(338348..338359) FT /colour=6 FT /note="ctaacaacttag, splice branch and acceptor" FT misc_feature complement(338389..338394) FT /colour=6 FT /note="gtaagg, splice donor sequence" FT mRNA 338590..338912 FT /colour=3 FT /note="mRNA from spc08061 323 1" FT misc_feature complement(339355..339371) FT /colour=6 FT /note="ctaaccaccttatatag, splice branch and acceptor" FT misc_feature complement(339477..339482) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS complement(340769..341788) FT /colour=10 FT /gene="SPCC736.13" FT /label=SPCC736.13 FT /note="SPCC736.13, len:339, SIMILARITY:Arabidopsis FT thaliana, O80924, putative ribotol dehydrogenase., (321 FT aa), fasta scores: opt: 507, E():1.3e-25, (34.4% identity FT in 291 aa)" FT /product="short chain dehydrogenase" FT /fasta_file="fasta/c736.tab.seq.04570.out" FT misc_feature complement(341042..341662) FT /note="Match to PF00106 adh_short, short chain FT dehydrogenase Score 92.40" FT CDS join(343034..343084,343352..345949) FT /colour=2 FT /function="required for sister chromatid separation" FT /gene="dis1" FT /gene="SPCC736.14" FT /label=dis1 FT /note="SPCC736.14, len:882" FT /product="microtubule and spindle pole body associated FT protein p93dis1" FT /fasta_file="fasta/c736.tab.seq.04571.out" FT misc_feature 343085..343090 FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature 343335..343351 FT /colour=6 FT /note="ctaactgatttatttag, splice branch and acceptor" FT misc_feature 345946..349172 FT /note="low complexity gene free region" FT CDS 349172..350227 FT /colour=10 FT /gene="SPCC736.15" FT /label=SPCC736.15 FT /note="SPCC736.15, len:351, SIMILARITY:Saccharomyces FT cerevisiae, YG2J_YEAST, hypothetical 38.3 kD protein in FT rpl11b-pdc6 intergenic region., (339 aa), fasta scores: FT opt: 1121, E():0, (52.1% identity in 351 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YGR086C" FT /fasta_file="fasta/c736.tab.seq.04572.out" FT misc_feature 350228..354455 FT /note="low-complexity gene-free region" FT misc_feature complement(354737..355570) FT /note="nominal overlap with cosmid SPCC594, EM:AL031523 S. FT pombe chromosome 3" FT misc_feature 354757..354762 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 354838..354855 FT /colour=6 FT /note="ctaattccttttcactag, splice branch and acceptor" FT misc_feature 354947..354952 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 355252..355268 FT /colour=6 FT /note="ttaaccttttgacttag, splice branch and acceptor" FT misc_feature 354737..355570 FT /note="nominal overlap with cosmid SPCC736, EM:AL023705 S. FT pombe chromosome 3" FT misc_feature 354757..354762 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 354838..354855 FT /colour=6 FT /note="ctaattccttttcactag, splice branch and acceptor" FT misc_feature 354947..354952 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 355252..355268 FT /colour=6 FT /note="ttaaccttttgacttag, splice branch and acceptor" FT CDS complement(358264..359733) FT /colour=10 FT /fasta_file="fasta/c594.tab.seq.00009.out" FT /gene="SPCC594.02c" FT /label=SPCC594.02c FT /note="SPCC594.02c, len:489, LOW SIMILARITY:Saccharomyces FT cerevisiae, YHC6_YEAST, hypothetical 30.7 kD protein in FT rim1-snf6 intergenic region ., (268 aa), fasta scores: FT opt: 220, E():2.8e-06, (31.8% identity in 132 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YHL026C which has has potential signal sequence and 2 FT potential transmembrane helices" FT CDS 361356..361682 FT /colour=9 FT /fasta_file="fasta/c594.tab.seq.00010.out" FT /gene="SPCC594.03" FT /label=SPCC594.03 FT /note="SPCC594.03, len:108" FT /product="very hypothetical protein" FT CDS complement(362699..363715) FT /colour=10 FT /gene="SPCC594.04c" FT /label=SPCC594.04c FT /note="SPCC594.04c, len:338, SIMILARITY:Arabidopsis FT thaliana, O81042, f19d11.17 protein, (333 aa), fasta FT scores: opt: 250, E():2.5e-10, (27.0% identity in 319 aa)" FT /product="hypothetical protein; low similarity to a region FT of yeast Farnesyl cysteine-carboxyl methyltransferase; FT conserved residues G{VL}{FW}.{WY}SRHPN{FY}{FL}{GA}{E}" FT /fasta_file="fasta/c594.tab.seq.00015.out" FT CDS complement(364204..365478) FT /colour=10 FT /fasta_file="fasta/c594.tab.seq.00012.out" FT /gene="SPCC594.05c" FT /label=SPCC594.05c FT /note="SPCC594.05c, len:424, SIMILARITY to N-term FT of:Saccharomyces cerevisiae, Q03012, lpi8p., (353 aa), FT fasta scores: opt: 261, E():4.2e-09, (39.8% identity in FT 133 aa)" FT /product="zinc finger protein; zf-PHD finger" FT misc_feature complement(364975..365127) FT /colour=9 FT /note="Pfam match to entry PF00628 PHD, PHD-finger" FT CDS complement(join(365928..366917,366954..366989)) FT /colour=8 FT /fasta_file="fasta/c594.tab.seq.00013.out" FT /gene="SPCC594.06c" FT /label=SPCC594.06c FT /note="SPCC594.06c, len:341, predicted to contain coiled- FT coil region" FT /product="hypothetical protein; sequence orphan; predicted FT coiled-coil" FT misc_feature complement(366918..366938) FT /colour=6 FT /note="ttaatttttacttacaactag, splice branch and acceptor" FT misc_feature complement(366948..366953) FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature complement(367414..367469) FT /note="hit to Schizosaccharomyces pombe cDNA, clone FT spc0204 5 but only short" FT CDS complement(join(368179..368790,368840..368995)) FT /colour=8 FT /fasta_file="fasta/c594.tab.seq.00014.out" FT /gene="SPCC594.07c" FT /label=SPCC594.07c FT /note="SPCC594.07c, len:255" FT /product="hypothetical protein; contains 8 predicted FT transmembrane helices; predicted N-terminal signal FT sequence; sequence orphan" FT misc_feature complement(368791..368808) FT /colour=6 FT /note="ctaacaatggattgaaag, splice branch and acceptor" FT misc_feature complement(368834..368839) FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature 369429..371366 FT /note="nominal overlap with cosmid SPCC1682, EM:AL031525 FT S. pombe chromosome 3" FT misc_feature 371230..371366 FT /note="SPCC1682.01, see c1682 for full length CDS" FT CDS join(371230..371286,371353..371438,371498..371546, FT 371612..371677) FT /EC_number="1.10.2.2" FT /colour=7 FT /gene="qcr9" FT /gene="SPCC1682.01" FT /label=SPCC1682.01 FT /note="SPCC1682.01, len:85, SIMILARITY:Saccharomyces FT cerevisiae, UCR9_YEAST, ubiquinol-cytochrome c reductase FT complex 7.3 kD protein, (65 aa), fasta scores: opt: 155, FT E():1e-05, (40.6% identity in 64 aa)" FT /product="putative ubiquinol cytochrome c reductase FT complex subunit ( cytochrome bc1 complex ); respiratory FT complex III" FT /fasta_file="fasta/c1682.tab.seq.04708.out" FT misc_feature 369429..371366 FT /note="nominal overlap with cosmid SPCC594, EM:AL031523 S. FT pombe chromosome 3" FT misc_feature 371287..371292 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 371335..371352 FT /colour=6 FT /note="ttaatcaatttcaattag, splice branch and acceptor" FT misc_feature 371439..371444 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 371486..371497 FT /colour=6 FT /note="ctaatgttctag, splice branch and acceptor" FT misc_feature 371547..371552 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 371597..371611 FT /colour=6 FT /note="ctaacaagacgatag, splice branch and acceptor" FT CDS complement(372447..375086) FT /colour=2 FT /gene="mcm3" FT /gene="SPCC1682.02c" FT /label=mcm3 FT /note="SPCC1682.02c, len:879" FT /product="MCM complex subunit; required for the initiation FT of DNA replication" FT /fasta_file="fasta/c1682.tab.seq.04709.out" FT misc_feature complement(373074..374750) FT /colour=9 FT /note="Pfam match to entry PF00493 MCM, MCM2/3/5 family" FT misc_feature complement(373818..373844) FT /colour=8 FT /note="PS00847 MCM family signature" FT CDS complement(join(375965..376590,376628..377882)) FT /colour=8 FT /gene="SPCC1682.03c" FT /label=SPCC1682.03c FT /note="SPCC1682.03c, len:626, SIMILARITY:Homo sapiens, FT O95815, dentin phosphoryn, (788 aa), fasta scores: opt: FT 252, E():1e-06, (25.3% identity in 399 aa)" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1682.tab.seq.04710.out" FT misc_feature complement(376591..376602) FT /colour=6 FT /note="ctaacttagtag, splice branch and acceptor" FT misc_feature complement(376622..376627) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS join(378229..378523,378690..378925) FT /colour=7 FT /gene="SPCC1682.04" FT /label=SPCC1682.04 FT /note="SPCC1682.04, len:176, SIMILARITY:Homo sapiens, FT CAT3_HUMAN, centrin 3., (167 aa), fasta scores: opt: 654, FT E():6e-31, (66.2% identity in 145 aa)" FT /product="EF-hand calcium-binding protein, Caltractin- FT cdc31 subfamily" FT /fasta_file="fasta/c1682.tab.seq.04711.out" FT misc_feature 378340..378426 FT /note="Match to PF00036 efhand, EF hand Score 38.40" FT misc_feature 378524..378529 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 378676..378689 FT /colour=6 FT /note="ctaattagatatag, splice branch and acceptor" FT misc_feature 378725..378811 FT /note="Match to PF00036 efhand, EF hand Score 20.42" FT misc_feature 378833..378916 FT /note="Match to PF00036 efhand, EF hand Score 41.00" FT CDS complement(join(379065..379652,379728..380604, FT 380660..380922,380969..381034)) FT /colour=7 FT /gene="SPCC1682.05c" FT /label=SPCC1682.05c FT /note="SPCC1682.05c, len:597, SIMILARITY:Caenorhabditis FT elegans., Q20822, f55c5.8 protein., (622 aa), fasta FT scores: opt: 229, E():5.7e-07, (18.9% identity in 512 aa)" FT /product="putative Signal recognition particle subunit by FT similar to S. cerevisiae srp68" FT /fasta_file="fasta/c1682.tab.seq.04712.out" FT misc_feature complement(379653..379669) FT /colour=6 FT /note="ctaatagattgctatag, splice branch and acceptor" FT misc_feature complement(379722..379727) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature complement(380605..380630) FT /colour=6 FT /note="ctaattatgtacttcttttgttatag, splice branch and FT accept or" FT misc_feature complement(380654..380659) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature complement(380923..380933) FT /colour=6 FT /note="ttaacttgcag, splice branch and acceptor" FT misc_feature complement(380963..380968) FT /colour=6 FT /note="gtgagt, splice donor sequence" FT LTR complement(381641..382003) FT /colour=4 FT CDS join(382377..382767,382813..383138) FT /colour=12 FT /gene="SPCC1682.06" FT /label=SPCC1682.06 FT /note="SPCC1682.06, len:238, almost identical to FT SPBC18H10. 18c, SIMILARITY:Streptococcus pneumoniae., FT Q9X9B8, comd protein., (441 aa), fasta scores: opt: 119, FT E():0.98, (28.4% identity in 116 aa)" FT /product="hypothetical protein; contains 2 predicted FT transmembrane helices; Pfam-B_23431; similar to S. pombe FT SPBC18H10.18C; possibly S. pombe specific" FT /fasta_file="fasta/c1682.tab.seq.04713.out" FT misc_feature 382768..382773 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 382798..382812 FT /colour=6 FT /note="ctaacgattttctag, splice branch and acceptor" FT CDS join(384473..384690,384821..385868) FT /colour=2 FT /gene="tfh47" FT /gene="ssl1" FT /gene="SPCC1682.07" FT /label=tfh47 FT /note="SPCC1682.07, len:421" FT /product="TFIIH subunit p47; zinc finger protein; zf-C2H2 FT type; similar to S. cerevisiae SSL1" FT /fasta_file="fasta/c1682.tab.seq.04714.out" FT misc_feature 384691..384696 FT /colour=6 FT /note="gtatgg, splice donor sequence" FT intron 384731..384820 FT /note="Intron confirmed by EST" FT misc_feature 384799..384820 FT /colour=6 FT /note="ctaacttgtcaatctgatttag, splice branch and acceptor" FT misc_feature 385773..385835 FT /colour=8 FT /note="PS00028 zinc finger, C2H2 type, domain" FT CDS complement(386124..388235) FT /colour=7 FT /gene="SPCC1682.08c" FT /label=SPCC1682.08c FT /note="SPCC1682.08c, len:703, FT SIMILARITY:Schizosaccharomyces pombe, YD15_SCHPO, putative FT regulatory protein c4g9.05., (581 aa), fasta scores: opt: FT 1009, E():0, (34.5% identity in 502 aa)" FT /product="RNA-binding protein, pumilio-family" FT /fasta_file="fasta/c1682.tab.seq.04715.out" FT misc_feature complement(386259..386363) FT /colour=9 FT /note="Pfam match to entry PF00806 PUF, Pumilio-family RNA FT binding domains (aka PUM-HD, Pumilio homology domain)" FT misc_feature complement(386391..386495) FT /colour=9 FT /note="Pfam match to entry PF00806 PUF, Pumilio-family RNA FT binding domains (aka PUM-HD, Pumilio homology domain)" FT misc_feature complement(386499..386603) FT /colour=9 FT /note="Pfam match to entry PF00806 PUF, Pumilio-family RNA FT binding domains (aka PUM-HD, Pumilio homology domain)" FT misc_feature complement(386607..386711) FT /colour=9 FT /note="Pfam match to entry PF00806 PUF, Pumilio-family RNA FT binding domains (aka PUM-HD, Pumilio homology domain)" FT misc_feature complement(386835..386939) FT /colour=9 FT /note="Pfam match to entry PF00806 PUF, Pumilio-family RNA FT binding domains (aka PUM-HD, Pumilio homology domain)" FT misc_feature complement(386943..387047) FT /colour=9 FT /note="Pfam match to entry PF00806 PUF, Pumilio-family RNA FT binding domains (aka PUM-HD, Pumilio homology domain)" FT CDS complement(join(388702..389218,389318..389412, FT 389534..389824)) FT /colour=7 FT /gene="SPCC1682.09c" FT /label=SPCC1682.09c FT /note="SPCC1682.09c, len:300, SIMILARITY:Saccharomyces FT cerevisiae, SHM1_YEAST, putative mitochondrial carrier FT protein yhm1/shm1., (300 aa), fasta scores: opt: 1393, FT E():0, (72.3% identity in 292 aa)" FT /product="MC transporter of unknown specificity" FT /fasta_file="fasta/c1682.tab.seq.04716.out" FT misc_feature complement(388720..389214) FT /note="Match to PF00153 mito_carr, Mitochondrial carrier FT proteins Score 155.40" FT misc_feature complement(388885..388914) FT /colour=8 FT /note="PS00215 Mitochondrial energy transfer proteins FT signature" FT misc_feature complement(389219..389230) FT /colour=6 FT /note="ctaacttttcag, splice branch and acceptor" FT misc_feature complement(389312..389317) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(389413..389425) FT /colour=6 FT /note="ctaacatgttcag, splice branch and acceptor" FT misc_feature complement(389528..389533) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(389540..389785) FT /note="Match to PF00153 mito_carr, Mitochondrial carrier FT proteins Score 20.41" FT CDS join(390747..390797,390842..391765) FT /colour=2 FT /gene="rpn8" FT /gene="SPCC1682.10" FT /label=rpn8 FT /note="SPCC1682.10, len:324, SIMILARITY:Trichoderma reesei, FT O13386, proteasome regulatory subunit 12., (342 aa), FT fasta scores: opt: 1298, E():0, (62.1% identity in 322 aa)" FT /product="19S proteasome regulatory subunit" FT /fasta_file="fasta/c1682.tab.seq.04717.out" FT misc_feature 390798..390803 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 390827..390841 FT /colour=6 FT /note="ttaaccattggttag, splice branch and acceptor" FT misc_feature 390845..391669 FT /note="Match to PF01398 Mov34, Mov34 family Score 358.48" FT CDS complement(join(392323..392434,392486..393025, FT 393075..394134,394172..394184)) FT /colour=7 FT /gene="SPCC1682.11c" FT /label=SPCC1682.11c FT /note="SPCC1682.11c, len:574" FT /product="similar to NADH dehydrogenase (ubiquinone) FT subunit 1 by multiple alignment; predicted transmembrane; FT no apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c1682.tab.seq.04718.out" FT misc_feature complement(392435..392449) FT /colour=6 FT /note="ctaactttttcacag, splice branch and acceptor" FT misc_feature complement(392480..392485) FT /colour=6 FT /note="gtgagt, splice donor sequence" FT misc_feature complement(393026..393040) FT /colour=6 FT /note="ctaacacaattgtag, splice branch and acceptor" FT misc_feature complement(393069..393074) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(394135..394145) FT /colour=6 FT /note="ctaacgagtag, splice branch and acceptor" FT misc_feature complement(394166..394171) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS complement(394883..396256) FT /colour=7 FT /gene="SPCC1682.12c" FT /label=SPCC1682.12c FT /note="SPCC1682.12c, len:457, SIMILARITY:Arabidopsis FT thaliana, O81780, hypothetical 70.8 kD protein., (631 aa), FT fasta scores: opt: 803, E():0, (39.6% identity in 359 aa)" FT /product="ubiquitin carboxyl-terminal hydrolase" FT /fasta_file="fasta/c1682.tab.seq.04719.out" FT misc_feature complement(395033..395146) FT /colour=9 FT /note="Pfam match to entry PF00443 UCH-2, Ubiquitin FT carboxy l-terminal hydrolases family 2" FT misc_feature complement(395828..395881) FT /colour=9 FT /note="Pfam match to entry PF00442 UCH-1, Ubiquitin FT carboxy l-terminal hydrolases family 2" FT CDS 399080..399898 FT /colour=10 FT /gene="SPCC1682.13" FT /label=SPCC1682.13 FT /note="SPCC1682.13, len:272, FT SIMILARITY:Schizosaccharomyces pombe, YDZC_SCHPO, FT hypothetical 33.9 kD protein c14c4.12c in chromosome i., FT (297 aa), fasta scores: opt: 790, E():0, (48.6% identity FT in 276 aa)" FT /product="conserved protein" FT /fasta_file="fasta/c1682.tab.seq.04720.out" FT CDS 400767..401348 FT /colour=2 FT /gene="rpl19-2" FT /gene="SPCC1682.14" FT /label=rpl19 FT /note="SPCC1682.14, len:193" FT /product="60S ribosomal protein L19B" FT /fasta_file="fasta/c1682.tab.seq.04721.out" FT misc_feature 400770..401213 FT /note="Match to PF01280 Ribosomal_L19e, Ribosomal protein FT L19e Score 335.42" FT CDS 402249..404498 FT /colour=10 FT /gene="SPCC1682.15" FT /label=SPCC1682.15 FT /note="SPCC1682.15, len:749" FT /product="hypothetical protein; sequence orphan; contains FT PXA domain and PX domain; possibly involved in FT intracellular signalling" FT /fasta_file="fasta/c1682.tab.seq.04722.out" FT misc_feature 405830..405835 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 406289..406302 FT /colour=6 FT /note="ctaacctattctag, splice branch and acceptor" FT misc_feature 406586..406831 FT /note="Match to PF00004 AAA, ATPases associated with FT various cellular activities (AAA) Score 23.41" FT misc_feature 406698..406832 FT /note="nominal overlap with cosmid SPCC306, EM:AL049728 S. FT pombe chromosome 3" FT misc_feature 406698..406832 FT /note="nominal overlap with cosmid SPCC1682, EM:AL031525 FT S. pombe chromosome 3" FT misc_feature 406700..407149 FT /colour=9 FT /note="Pfam match to entry PF00004 AAA, ATPases associated FT with various cellular activities (AAA)" FT CDS complement(join(408244..408693,408758..408823)) FT /colour=7 FT /gene="SPCC306.02c" FT /label=SPCC306.02c FT /note="SPCC306.02c, len:171, SIMILARITY:, E328824, , (176 FT aa), fasta scores: opt: 445, E():4.1e-24, (42.4% identity FT in 170 aa)" FT /product="putative rab-interacting protein; similar to S. FT cerevisiae YIP3; possibly involved in vesicular transport FT from S. cerevisiae 2-hybrid data" FT /fasta_file="fasta/c306.tab.seq.05212.out" FT misc_feature complement(408694..408710) FT /colour=6 FT /note="ctaacgcaaaatggtag, splice branch and acceptor" FT intron complement(408694..408757) FT /colour=2 FT /note="confirmed" FT misc_feature complement(408752..408757) FT /colour=6 FT /note="gtatga, splice donor sequence" FT CDS complement(409839..412067) FT /colour=2 FT /gene="cnd2" FT /gene="SPCC306.03c" FT /label=cnd2 FT /note="SPCC306.03c, len:742, SIMILARITY:Arabidopsis FT thaliana, O80896, putative condensin protein., (704 aa), FT fasta scores: opt: 525, E():8.4e-25, (28.5% identity in FT 738 aa)" FT /product="condensin subunit; XCAP-H; involved in FT chromosome condensation; similar to S. cerevisiae BRN1" FT /fasta_file="fasta/c306.tab.seq.05213.out" FT CDS complement(412765..415527) FT /colour=7 FT /gene="SPCC306.04c" FT /label=SPCC306.04c FT /note="SPCC306.04c, len:920, SIMILARITY:Saccharomyces FT cerevisiae, SET1_YEAST, set1 protein., (1080 aa), fasta FT scores: opt: 963, E():0, (28.6% identity in 921 aa)" FT /product="SET domain protein; putative chromatin mediated FT transcriptional silencing; similar to S. cerevisiae SET1" FT /fasta_file="fasta/c306.tab.seq.05214.out" FT misc_feature complement(412816..413208) FT /colour=9 FT /note="Pfam match to entry PF00856 SET, SET domain" FT misc_feature complement(415006..415242) FT /colour=9 FT /note="Pfam match to entry PF00076 rrm, RNA recognition FT motif. (aka RRM, RBD, or RNP domain)," FT CDS complement(join(416424..416532,416616..416779, FT 417005..417577)) FT /colour=8 FT /gene="SPCC306.05c" FT /label=SPCC306.05c FT /note="SPCC306.05c, len:281, SIMILARITY:Homo sapiens, FT O15503, insulin induced protein 1., (277 aa), fasta FT scores: opt: 245, E():1.6e-09, (28.6% identity in 185 aa)" FT /product="hypothetical protein; sequence orphan; no FT apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c306.tab.seq.05215.out" FT misc_feature complement(416533..416545) FT /colour=6 FT /note="ctaacaaatttag, splice branch and acceptor" FT misc_feature complement(416610..416615) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(416780..416794) FT /colour=6 FT /note="ctaacttatctctag, splice branch and acceptor" FT misc_feature complement(416999..417004) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS complement(join(418476..419319,419382..419473)) FT /colour=10 FT /gene="SPCC306.06c" FT /label=SPCC306.06c FT /note="SPCC306.06c, len:311, SIMILARITY:Saccharomyces FT cerevisiae, YHQ1_YEAST, hypothetical 39.1 kD protein in FT hxt5-nrk1 intergenic region., (335 aa), fasta scores: opt: FT 141, E():0.028, (26.1% identity in 199 aa)" FT /product="possibly involved in glucose metabolism; similar FT to S. cerevisiae BIG1" FT /fasta_file="fasta/c306.tab.seq.05216.out" FT misc_feature complement(419320..419333) FT /colour=6 FT /note="ctaactaaaaacag, splice branch and acceptor" FT misc_feature complement(419376..419381) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS complement(join(420000..420657,420879..421012, FT 421073..421135)) FT /colour=10 FT /gene="SPCC306.07c" FT /label=SPCC306.07c FT /note="SPCC306.07c, len:284, SIMILARITY:Homo sapiens, FT O76021, pbk1 protein., (516 aa), fasta scores: opt: 336, FT E():3.8e-15, (30.4% identity in 280 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YHR052W and YKR060W" FT /fasta_file="fasta/c306.tab.seq.05217.out" FT misc_feature complement(420658..420672) FT /colour=6 FT /note="ctaactattttacag, splice branch and acceptor" FT misc_feature complement(420873..420878) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(421013..421030) FT /colour=6 FT /note="cttacaaataatcaatag, splice branch and acceptor" FT misc_feature complement(421067..421072) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT CDS complement(421703..422728) FT /colour=7 FT /gene="SPCC306.08c" FT /label=SPCC306.08c FT /note="SPCC306.08c, len:341, SIMILARITY:Saccharomyces FT cerevisiae, MDHM_YEAST, malate dehydrogenase, FT mitochondrial , (334 aa), fasta scores: opt: 1262, E():0, FT (59.8% identity in 331 aa)" FT /product="putative malate dehydrogenase, mitochondrial; FT similar to S. cerevisiae MDH1" FT /fasta_file="fasta/c306.tab.seq.05218.out" FT misc_feature complement(421718..422641) FT /colour=9 FT /note="Pfam match to entry PF00056 ldh, lactate/malate FT dehydrogenase" FT CDS complement(join(424547..426143,426218..426276)) FT /colour=2 FT /gene="cap1" FT /gene="cap" FT /gene="SPCC306.09c" FT /label=cap1 FT /note="SPCC306.09c, len:551" FT /product="adenylyl cyclase-associated protein" FT /fasta_file="fasta/c306.tab.seq.05219.out" FT misc_feature complement(join(424550..426143,426218..426237)) FT /note="Match to PF01213 CAP, CAP protein" FT misc_feature complement(426144..426162) FT /colour=6 FT /note="ctaacatttactcatatag, splice branch and acceptor" FT intron 426144..426217 FT /colour=2 FT /note="confirmed" FT misc_feature complement(426212..426217) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature join(427445..427583,427752..427997,428047..428290, FT 428336..428527,428568..428630,428681..428763) FT /fasta_file="fasta/c306.tab.seq.00018.out" FT /note="c306_gf6, pseudogene" FT CDS join(427445..427583,427752..427997,428047..428290, FT 428336..428527,428568..428630,428681..428763) FT /colour=4 FT /gene="wtf3-pseudo" FT /gene="SPCC306.10" FT /label=wtf3-pseudo FT /note="SPCC306.10," FT /product="wtf-pseudo" FT /pseudo FT /fasta_file="fasta/c306.tab.seq.05220.out" FT misc_feature 427584..427589 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 427739..427751 FT /colour=6 FT /note="ttaatttaaacag, splice branch and acceptor" FT misc_feature 427998..428003 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 428035..428046 FT /colour=6 FT /note="ctaactcattag, splice branch and acceptor" FT misc_feature 428291..428296 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 428325..428335 FT /colour=6 FT /note="ctaacacgcag, splice branch and acceptor" FT misc_feature 428528..428533 FT /colour=6 FT /note="gtttgt, splice donor sequence" FT misc_feature 428555..428567 FT /colour=6 FT /note="ctaaccgtatcag, splice branch and acceptor" FT misc_feature 428631..428636 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 428668..428680 FT /colour=6 FT /note="cttacccgactag, splice branch and acceptor" FT CDS 430788..431639 FT /colour=8 FT /gene="SPCC306.11" FT /label=SPCC306.11 FT /note="SPCC306.11, len:283" FT /product="hypothetical protein; sequence orphan; contains FT predicted N-terminal signal sequence" FT /fasta_file="fasta/c306.tab.seq.05221.out" FT misc_feature complement(432041..432162) FT /note="nominal overlap with cosmid SPCC4G3, EM:Z97052 S. FT pombe chromosome 3" FT misc_feature 432041..432162 FT /note="nominal overlap with cosmid SPCC306 S. pombe FT chromosome 3" FT CDS complement(432395..434674) FT /colour=2 FT /gene="alp16" FT /gene="SPCC4G3.19" FT /label=alp16 FT /note="SPCC4G3.19, len:759," FT /product="gamma tubulin complex (T. Toda pers comm); FT multicopy suppresser of an alp6 temperature sensitive FT mutant; no apparent orthologs" FT /fasta_file="fasta/c4G3.tab.seq.04402.out" FT CDS complement(435937..438423) FT /colour=8 FT /gene="SPCC4G3.18" FT /label=SPCC4G3.18 FT /note="SPCC4G3.18, len:828" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c4G3.tab.seq.04403.out" FT CDS complement(439064..439660) FT /colour=10 FT /gene="SPCC4G3.17" FT /label=SPCC4G3.17 FT /note="SPCC4G3.17, len:198, SIMILARITY:Saccharomyces FT cerevisiae, YGK1_YEAST, hypothetical 25.3 kD protein in FT rpl28-seh1 intergenic region., (215 aa), fasta scores: FT opt: 579, E():7.9e-31, (47.6% identity in 185 aa)" FT /product="conserved protein; similar to S. cerevisiae FT YGL101W" FT /fasta_file="fasta/c4G3.tab.seq.04404.out" FT CDS complement(440054..441271) FT /colour=7 FT /gene="SPCC4G3.16" FT /label=SPCC4G3.16 FT /note="SPCC4G3.16, len:405, SIMILARITY at c- FT term:Saccharomyces cerevisiae, RIB2_YEAST, drap deaminase., FT (591 aa), fasta scores: opt: 397, E():6.5e-19, (44.0% FT identity in 150 aa)" FT /product="putative deaminase" FT /fasta_file="fasta/c4G3.tab.seq.04405.out" FT misc_feature complement(440243..440449) FT /note="Match to PF00383 dCMP_cyt_deam, Cytidine and FT deoxycytidylate deaminase zinc binding region Score 76.66" FT CDS join(442039..442145,442214..442432,442492..442696) FT /colour=7 FT /gene="SPCC4G3.15c" FT /label=SPCC4G3.15c FT /note="SPCC4G3.15c, len:176, SIMILARITY:Caenorhabditis FT elegans., Q10923, hypothetical 48.1 kD protein b0286.4 in FT chromosome ii., (444 aa), fasta scores: opt: 336, E():2.5e- FT 16, (35.9% identity in 181 aa) also similar to eg FT NOT2_YEAST, P06100, general negative regulator of FT transcription, (191aa), fasta scores, opt:320, E(): 1.5e- FT 15, (36.4% identity in 187 aa overlap)" FT /product="putative CCR4-Not complex; similar to S. FT cerevisiae carbon catabolite repressor protein 4 component FT NOT2/CDC36" FT /fasta_file="fasta/c4G3.tab.seq.04406.out" FT misc_feature 442146..442151 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 442200..442213 FT /colour=6 FT /note="ctaaccttttttag, splice branch and acceptor" FT misc_feature 442433..442438 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT intron 442433..442491 FT /colour=2 FT /note="confirmed intron" FT misc_feature 442479..442491 FT /colour=6 FT /note="ctaacgtaaacag, splice branch and acceptor" FT CDS complement(443170..444756) FT /colour=7 FT /gene="SPCC4G3.14" FT /label=SPCC4G3.14 FT /note="SPCC4G3.14, len:528, SIMILARITY:Arabidopsis FT thaliana, AAD55483, f18b13.12 protein., (499 aa), fasta FT scores: opt: 806, E():0, (35.8% identity in 438 aa)" FT /product="DNAJ domain protein" FT /fasta_file="fasta/c4G3.tab.seq.04407.out" FT misc_feature complement(443404..443763) FT /note="Match to PF01556 DnaJ_C, DnaJ C terminal region FT Score 193.82" FT misc_feature complement(443827..444078) FT /note="Match to PF00684 DnaJ_CXXCXGXG, DnaJ central domain FT (4 repeats) Score 100.98" FT misc_feature complement(444307..444501) FT /note="Match to PF00226 DnaJ, DnaJ domain Score 110.89" FT CDS 445404..446051 FT /colour=7 FT /gene="SPCC4G3.13c" FT /label=SPCC4G3.13c FT /note="SPCC4G3.13c, len:215, putative signal sequence at FT aa 1-20" FT /product="possibly recruits a soluble ubiquitin- FT conjugating enzyme to the membrane; similar to S. FT cerevisiae CUE1" FT /fasta_file="fasta/c4G3.tab.seq.04408.out" FT CDS 447264..449729 FT /colour=7 FT /gene="SPCC4G3.12c" FT /label=SPCC4G3.12c FT /note="SPCC4G3.12c, len:821" FT /product="zinc finger protein; zf-C3HC4 type (RING FT finger); possibly LIM domain interacting by similar to FT mouse RNF12; serine-rich protein" FT /fasta_file="fasta/c4G3.tab.seq.04409.out" FT misc_feature 449559..449687 FT /note="Match to PF00097 zf-C3HC4, zinc finger, C3HC4 type FT (RING finger) Score 30.37" FT CDS complement(450465..451415) FT /colour=10 FT /gene="SPCC4G3.11" FT /label=SPCC4G3.11 FT /note="SPCC4G3.11, len:316" FT /product="hypothetical protein; similar to S. cerevisiae FT YDL089W (low); contains 4 predicted transmembrane helices" FT /fasta_file="fasta/c4G3.tab.seq.04410.out" FT CDS 452369..454429 FT /colour=2 FT /gene="rhp42" FT /gene="rhp4b" FT /gene="SPCC4G3.10c" FT /label=rhp42 FT /note="SPCC4G3.10c, len:686, SIMILARITY:Saccharomyces FT cerevisiae, RAD4_YEAST, DNA repair protein rad4., (754 aa), FT fasta scores: opt: 559, E():4e-27, (27.3% identity in FT 697 aa)" FT /product="nucleotide-excision repair protein; similar to FT S. cerevisiae RAD4" FT /fasta_file="fasta/c4G3.tab.seq.04411.out" FT CDS 455303..457210 FT /colour=7 FT /gene="SPCC4G3.09c" FT /label=SPCC4G3.09c FT /note="SPCC4G3.09c, len:635, SIMILARITY:Saccharomyces FT cerevisiae, YN33_YEAST, hypothetical 73.0 kD protein in FT cla4-mid1 intergenic region., (633 aa), fasta scores: opt: FT 716, E():0, (43.1% identity in 420 aa)" FT /product="TBC domain protein; putative GTPase activating FT protein of Rab-like GTPase; similar to S. cerevisiae msb3" FT /fasta_file="fasta/c4G3.tab.seq.04412.out" FT misc_feature 456191..456919 FT /note="Match to PF00566 TBC, TBC domain Score 177.88" FT CDS complement(458100..459410) FT /colour=2 FT /gene="psk1" FT /gene="SPCC4G3.08" FT /label=psk1 FT /note="SPCC4G3.08, len:436," FT /product="serine/threonine protein kinase" FT /fasta_file="fasta/c4G3.tab.seq.04413.out" FT misc_feature complement(458253..458360) FT /note="Match to PF00433 pkinase_C, protein kinase C FT terminal domain Score 33.57" FT misc_feature complement(458406..459140) FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain Score 288.65" FT CDS 460117..461502 FT /colour=7 FT /gene="SPCC4G3.07c" FT /label=SPCC4G3.07c FT /note="SPCC4G3.07c, len:461, FT SIMILARITY:Schizosaccharomyces pombe, YAJ8_SCHPO, FT hypothetical 60.7 kD protein c30d11.08c in chromosome i., FT (538 aa), fasta scores: opt: 582, E():1.2e-28, (28.8% FT identity in 473 aa)" FT /product="zinc finger protein; zf-PHD finger; similar to FT human retinoblastoma binding protein 2" FT /fasta_file="fasta/c4G3.tab.seq.04414.out" FT misc_feature 460684..460854 FT /note="Match to PF00628 PHD, PHD-finger Score 64.54" FT CDS 461951..462385 FT /colour=7 FT /gene="SPCC4G3.06c" FT /label=SPCC4G3.06c FT /note="SPCC4G3.06c, len:144, some SIMILARITY FT to:Saccharomyces cerevisiae, RM04_YEAST, 60s ribosomal FT protein l4, mitochondrial , (319 aa), fasta scores: opt: FT 289, E():8.5e-13, (38.8% identity in 121 aa)" FT /product="Mitochondrial ribosomal protein of the large FT subunit by similar to S. cerevisiae mrpl4" FT /fasta_file="fasta/c4G3.tab.seq.04415.out" FT CDS 462996..464714 FT /colour=2 FT /gene="mus81" FT /gene="SPCC4G3.05c" FT /label=mus81 FT /note="SPCC4G3.05c, len:572, LOW SIMILARITY:Saccharomyces FT cerevisiae, Q04149, d9509.6p., (632 aa), fasta scores: FT opt: 674, E():0, (28.7% identity in 600 aa)" FT /product="DNA damage tolerance protein; putative damage FT recognition or repair; Cds1-binding" FT /fasta_file="fasta/c4G3.tab.seq.04416.out" FT CDS join(464937..465129,465259..465983) FT /colour=7 FT /gene="coq5" FT /gene="SPCC4G3.04c" FT /label=coq5 FT /note="SPCC4G3.04c, len:305, SIMILARITY:Saccharomyces FT cerevisiae, COQ5_YEAST, ubiquinone biosynthesis FT methyltransferase coq5, (307 aa), fasta scores: opt: 914, FT E():0, (53.3% identity in 272 aa)" FT /product="putative C-methytransferase of the coenzyme Q FT (ubiquinone) biosynthesispathway; mitochondrial" FT /fasta_file="fasta/c4G3.tab.seq.04417.out" FT misc_feature 465130..465135 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 465243..465258 FT /colour=6 FT /note="ctaaccttttaattag, splice branch and acceptor" FT CDS complement(466796..467839) FT /colour=7 FT /gene="SPCC4G3.03" FT /label=SPCC4G3.03 FT /note="SPCC4G3.03, len:347" FT /product="hypothetical protein; similar to S. cerevisiae FT YLR149C; putative apoptotic protease activating factor, by FT low similar to human spaf1 (conserved catalytic residues)" FT /fasta_file="fasta/c4G3.tab.seq.04418.out" FT CDS complement(join(468839..469135,469245..469331, FT 469396..469497,469626..469688)) FT /EC_number="3.6.1.17" FT /colour=2 FT /gene="aph1" FT /gene="SPCC4G3.02" FT /label=aph1 FT /note="SPCC4G3.02, len:182" FT /product="bis(5'-nucleosidyl)-tetraphosphatase; HIT family" FT /fasta_file="fasta/c4G3.tab.seq.04419.out" FT misc_feature complement(join(469079..469135,469245..469331, FT 469396..469497,469626..469673)) FT /note="Match to PF01230 HIT, HIT family Score 65.61" FT misc_feature complement(469136..469147) FT /colour=6 FT /note="ttaactcaatag, splice branch and acceptor" FT misc_feature complement(469239..469244) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(469332..469346) FT /colour=6 FT /note="ctaatgaaaacttag, splice branch and acceptor" FT misc_feature complement(469390..469395) FT /colour=6 FT /note="gtagga, splice donor sequence" FT misc_feature complement(469498..469510) FT /colour=6 FT /note="ctaacgattttag, splice branch and acceptor" FT misc_feature complement(469620..469625) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(471037..471684) FT /note="Match to PF00389 2-Hacid_DH, D-isomer specific 2- FT hydroxyacid dehydrogenases Score 350.75" FT misc_feature 471824..473974 FT /note="nominal overlap with cosmid SPCC364 S. pombe FT chromosome 3" FT tRNA complement(473199..473280) FT /note="tRNA Ser anticodon AGA" FT /note="tRNA Ser anticodon AGA, Cove score 59.19" FT misc_feature complement(471824..473974) FT /note="nominal overlap with cosmid SPCC4G3, EM:Z97052 FT S.pombe chromosome 3" FT CDS complement(474390..475571) FT /colour=7 FT /gene="SPCC364.06" FT /label=SPCC364.06 FT /note="SPCC364.06, len:393, SIMILARITY:Schizosaccharomyces FT pombe, P78920, nucleosome assembly protein, (379 aa), FT fasta scores: opt: 740, E():0, (43.8% identity in 386 aa)" FT /product="nucleosome assembly protein; similar to S. FT cerevisiae NAP1; duplicated in S. pombe" FT /fasta_file="fasta/c364.tab.seq.04426.out" FT misc_feature complement(474555..475346) FT /note="Match to NAP_family Score 410.48" FT CDS complement(join(476046..478343,478400..478587, FT 478640..478745,478800..478864,478913..478988)) FT /colour=2 FT /gene="vps3" FT /gene="SPCC364.05" FT /label=vps3 FT /note="SPCC364.05, len:910, SIMILARITY:Saccharomyces FT cerevisiae, VPS3_YEAST, vacuolar protein sorting- FT associated protein vps3., (1011 aa), fasta scores: opt: FT 218, E():2e-06, (20.1% identity in 942 aa)" FT /product="putative vacuolar sorting protein" FT /fasta_file="fasta/c364.tab.seq.04427.out" FT misc_feature complement(478344..478362) FT /colour=6 FT /note="ctaattaacaataaacaag, splice branch and acceptor" FT misc_feature complement(478394..478399) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(478588..478600) FT /colour=6 FT /note="ttaacggtggtag, splice branch and acceptor" FT misc_feature complement(478634..478639) FT /colour=6 FT /note="gtgtgg, splice donor sequence" FT misc_feature complement(478746..478761) FT /colour=6 FT /note="ttaacacgcgtattag, splice branch and acceptor" FT misc_feature complement(478794..478799) FT /colour=6 FT /note="gtttgt, splice donor sequence" FT misc_feature complement(478865..478885) FT /colour=6 FT /note="ctaactatttgatttttttag, splice branch and acceptor" FT misc_feature complement(478907..478912) FT /colour=6 FT /note="gtaagg, splice donor sequence" FT CDS join(479727..479778,479836..479946,480013..481751) FT /colour=7 FT /gene="SPCC364.04c" FT /label=SPCC364.04c FT /note="SPCC364.04c, len:633, SIMILARITY:Saccharomyces FT cerevisiae, YKR9_YEAST, hypothetical 77.5 kD protein, (679 FT aa), fasta scores: opt: 539, E():1.9e-20, (29.3% identity FT in 645 aa)" FT /product="similar to casp proteins" FT /fasta_file="fasta/c364.tab.seq.04428.out" FT misc_feature 479779..479784 FT /colour=6 FT /note="gttcgt, splice donor sequence" FT intron 479779..479835 FT misc_feature 479819..479835 FT /colour=6 FT /note="ctaacgtgagataatag, splice branch and acceptor" FT misc_feature 479947..479952 FT /colour=6 FT /note="gtatgg, splice donor sequence" FT intron 479947..480012 FT /note="confirmed" FT misc_feature 479993..480012 FT /colour=6 FT /note="ctaatattgttaatatacag, splice branch and acceptor" FT CDS complement(482235..482798) FT /colour=2 FT /gene="rpl17-2" FT /gene="SPCC364.03" FT /label=rpl17-2 FT /note="SPCC364.03, len:187" FT /product="60S ribosomal protein L17" FT /fasta_file="fasta/c364.tab.seq.04429.out" FT mRNA 482260..482277 FT /colour=3 FT /note="mRNA from AU007951 97 114" FT misc_feature complement(482343..482750) FT /note="Match to Ribosomal_L22 Score 234.18" FT misc_feature complement(482349..482423) FT /colour=8 FT /note="PS00464 Ribosomal protein L22 signature" FT CDS 483585..484739 FT /colour=2 FT /gene="bis2" FT /gene="SPCC364.02c" FT /label=bis2 FT /note="SPCC364.02c, len:384, SIMILARITY:Drosophila FT melanogaster, O44424, es2 protein, (414 aa), fasta scores: FT opt: 151, E():0.1, (23.2% identity in 349 aa)" FT /product="stress response protein; binds isp1p; ES2 FT nuclear protein family; deleted in DiGeorge syndrome FT homolog; no apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c364.tab.seq.04430.out" FT CDS complement(join(484965..485924,485977..485979)) FT /colour=8 FT /gene="SPCC364.01" FT /label=SPCC364.01 FT /note="splicing possibly incorrect; non-consensus branch - FT may use inteRNAl Met @ posn. 1166" FT /note="SPCC364.01, len:320" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c364.tab.seq.04431.out" FT misc_feature complement(485925..485939) FT /colour=6 FT /note="cttatactttaatag, splice branch and acceptor" FT misc_feature complement(485971..485976) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature complement(486658..486822) FT /note="nominal overlap with cosmid SPCC970, EM:AL031530 S. FT pombe chromosome 3" FT misc_feature complement(486658..486822) FT /note="nominal overlap with cosmid SPCC364, EM:AL022243 S. FT pombe chromosome 3" FT CDS join(487167..487305,487473..487718,487768..488046, FT 488092..488283,488324..488386,488437..488519) FT /colour=3 FT /gene="wtf2" FT /gene="SPCC970.11c" FT /label=wtf2 FT /note="SPCC970.11c, len:333, this sequence has homologs in FT many other cosmids including c1906, c1739, c622, c285, FT c576,c553, c1577, c306, c2E12, c162; the translation FT contains 3 repeats, consensus 'KVTAVFLAQCV' which has 6 FT copies in the translation of the related cDNA fragment FT sequences are usually bordered by tf2 type LTRs, which has FT lead us to speculate that these regions possibly FT duplicated by the retroposition machinery of tf2 type FT transposon actingin trans" FT /product="hypothetical wtf protein" FT /fasta_file="fasta/c970.tab.seq.04856.out" FT misc_feature 487306..487311 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 487460..487472 FT /colour=6 FT /note="ttaatttaaacag, splice branch and acceptor" FT misc_feature 487719..487724 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 487756..487767 FT /colour=6 FT /note="ctaactcatcag, splice branch and acceptor" FT misc_feature 488047..488052 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT intron 488047..488091 FT /note="intron confirmed by EST" FT misc_feature 488074..488091 FT /colour=6 FT /note="ctgaccgctaacacgcag, splice branch and acceptor" FT misc_feature 488284..488289 FT /colour=6 FT /note="gtttgt, splice donor sequence" FT intron 488284..488323 FT /note="intron confirmed by EST" FT misc_feature 488311..488323 FT /colour=6 FT /note="ctaaccgtatcag, splice branch and acceptor" FT misc_feature 488387..488392 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT intron 488387..488436 FT /note="intron confirmed by EST" FT misc_feature 488424..488436 FT /colour=6 FT /note="cttacccgactag, splice branch and acceptor" FT LTR complement(489072..489396) FT /note="Tf2-type LTR" FT LTR 489375..489697 FT /note="Tf2-type LTR" FT CDS join(490068..490157,490222..492174) FT /colour=10 FT /gene="SPCC970.10c" FT /label=SPCC970.10c FT /note="SPCC970.10c, len:680, predicted to contain coiled- FT coil regions, SIMILARITY:Schizosaccharomyces pombe, O74924, FT hypothetical zinc finger protein., (692 aa), fasta FT scores: opt: 355, E():8.2e-12, (21.9% identity in 707 aa)" FT /product="zinc finger protein; zf-C3HC4 type (RING finger)" FT /fasta_file="fasta/c970.tab.seq.04857.out" FT misc_feature 490158..490163 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 490207..490221 FT /colour=6 FT /note="ctaactctgttaaag, splice branch and acceptor" FT misc_feature 492010..492129 FT /note="Match to PF00097 zf-C3HC4, zinc finger, C3HC4 type FT (RING finger) Score 34.28" FT misc_feature 492058..492087 FT /colour=8 FT /note="PS00518 zinc finger, C3HC4 type (RING finger), FT signa ture" FT CDS complement(join(492370..492784,492832..493549, FT 493600..493738,493780..493954,494003..495612, FT 495673..495722,495767..495926)) FT /colour=2 FT /gene="sec8" FT /gene="SPCC970.09" FT /label=sec8 FT /note="SPCC970.09, len:1088" FT /product="exocyst complex component; interacts with Sec6p, FT Sec10p, Exo70p (PMID: 11854409); required for cell FT separation (PMID: 11854409); similar to S. cerevisiae FT SEC8" FT /fasta_file="fasta/c970.tab.seq.00015.out" FT misc_feature complement(492785..492798) FT /colour=6 FT /note="ctaactttttatag, splice branch and acceptor" FT misc_feature complement(492826..492831) FT /colour=6 FT /note="gtaaat, splice donor sequence" FT misc_feature complement(493550..493563) FT /colour=6 FT /note="cttaccctttatag, splice branch and acceptor" FT misc_feature complement(493594..493599) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(493739..493754) FT /colour=6 FT /note="ttaacgttaattttag, splice branch and acceptor" FT misc_feature complement(493774..493779) FT /colour=6 FT /note="gtatag, splice donor sequence" FT misc_feature complement(493955..493969) FT /colour=6 FT /note="ctaacaaaaatttag, splice branch and acceptor" FT misc_feature complement(493997..494002) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature complement(495613..495628) FT /colour=6 FT /note="ctaacgaatggttaag, splice branch and acceptor" FT misc_feature complement(495667..495672) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(495723..495738) FT /colour=6 FT /note="ttaacctttatgctag, splice branch and acceptor" FT misc_feature complement(495761..495766) FT /colour=6 FT /note="gtaagg, splice donor sequence" FT CDS complement(496863..499766) FT /colour=7 FT /gene="SPCC970.08" FT /label=SPCC970.08 FT /note="SPCC970.08, len:967, SIMILARITY:Saccharomyces FT cerevi siae, ydr017c, Q12494, potential b-zip FT transcription factor , (1050 aa), fasta scores: opt: 328, FT E():0, (28.4% identity in 1011 aa)" FT /product="b-ZIP (basic-leucine-zipper) transcription FT factor family" FT /fasta_file="fasta/c970.tab.seq.04859.out" FT LTR 499951..500308 FT /note="Tf1-type LTR" FT LTR complement(500370..500717) FT /note="Tf1-type LTR" FT CDS 500859..502769 FT /colour=8 FT /gene="SPCC970.07c" FT /label=SPCC970.07c FT /note="SPCC970.07c, len:636" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c970.tab.seq.04860.out" FT CDS complement(503617..504525) FT /colour=7 FT /gene="SPCC970.06" FT /label=SPCC970.06 FT /note="SPCC970.06, len:302, SIMILARITY:Saccharomyces FT cerevisiae, YG5Y_YEAST, hypothetical 35.0 kD protein in FT bgl2-zuo1 intergenic region., (310 aa), fasta scores: opt: FT 653, E():0, (36.3% identity in 322 aa)" FT /product="putative endoplasmic reticulum associated FT protein" FT /fasta_file="fasta/c970.tab.seq.04861.out" FT CDS complement(join(506415..506492,506654..506875)) FT /colour=2 FT /gene="rpl36-1" FT /gene="SPCC970.05" FT /label=rpl36 FT /note="SPCC970.05, len:99" FT /product="60S ribosomal protein L36.1/L36A" FT /fasta_file="fasta/c970.tab.seq.04862.out" FT misc_feature complement(join(506421..506492,506654..506866)) FT /note="Match to PF01158 Ribosomal_L36e, Ribosomal protein FT L36e Score 155.08" FT misc_feature complement(506493..506507) FT /colour=6 FT /note="ctaacaactttttag, splice branch and acceptor" FT intron complement(506493..506653) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(506648..506653) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(506696..506728) FT /colour=8 FT /note="PS01190 Ribosomal protein L36e signature" FT CDS join(508053..508320,508777..508870,508936..509308) FT /colour=7 FT /gene="SPCC970.04c" FT /label=SPCC970.04c FT /note="SPCC970.04c, len:244, SIMILARITY:Saccharomyces FT cerevisiae, MOB2_YEAST, mob2 protein, (259 aa), fasta FT scores: opt: 803, E():0, (50.2% identity in 247 aa)" FT /product="similar to S. cerevisiae MOB2; possibly involved FT in the maintenance of ploidy; possibly involved in FT cytokinesis" FT /fasta_file="fasta/c970.tab.seq.04863.out" FT misc_feature 508321..508326 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 508758..508776 FT /colour=6 FT /note="ctaactcttttcattttag, splice branch and acceptor" FT misc_feature 508871..508876 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 508914..508935 FT /colour=6 FT /note="ctaacttactcttttattatag, splice branch and acceptor" FT CDS complement(510435..511340) FT /colour=7 FT /gene="SPCC970.03" FT /label=SPCC970.03 FT /note="SPCC970.03, len:301, SIMILARITY:Saccharomyces FT cerevi siae, NC5R_YEAST, putative nadh-cytochrome b5 FT reductase, (3 22 aa), fasta scores: opt: 877, E():0, FT (49.1% identity in 2 73 aa)" FT /note="SPCC970.03, len:301, SIMILARITY:Mortierella alpina., FT BAA85586, nadh-cytochrome b5 reductase., (298 aa), fasta FT scores: opt: 937, E():0, (49.1% identity in 285 aa)" FT /product="putative nadh-cytochrome b5 reductase; similar FT to S. cerevisiae CBR1" FT /fasta_file="fasta/c970.tab.seq.04864.out" FT misc_feature complement(510504..510845) FT /note="Match to PF00175 oxidored_fad, Oxidoreductase FT FAD/NAD-binding domain Score 146.56" FT misc_feature complement(510876..511190) FT /note="Match to PF00970 Cyt_reductase, FAD/NAD-binding FT Cytochrome reductase Score 114.39" FT CDS complement(join(512043..512275,512326..512635, FT 512709..513281,513328..513540)) FT /colour=10 FT /gene="SPCC970.02" FT /label=SPCC970.02 FT /note="SPCC970.02, len:442, SIMILARITY:Saccharomyces FT cerevisiae, YKE6_YEAST, hypothetical 49.6 kD protein in FT elm1-pri2 intergenic region., (449 aa), fasta scores: opt: FT 1450, E():0, (49.9% identity in 423 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YKL046C" FT /fasta_file="fasta/c970.tab.seq.04865.out" FT misc_feature complement(512276..512290) FT /colour=6 FT /note="ctaactttataatag, splice branch and acceptor" FT misc_feature complement(512320..512325) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(512636..512651) FT /colour=6 FT /note="ctaacagtttcaccag, splice branch and acceptor" FT misc_feature complement(512703..512708) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature complement(513282..513300) FT /colour=6 FT /note="ttaacaacaatggctttag, splice branch and acceptor" FT misc_feature complement(513322..513327) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT CDS complement(join(514122..514251,514293..514328, FT 514377..514463,514511..514571,514617..514770)) FT /colour=8 FT /gene="SPCC970.12" FT /label=SPCC970.12 FT /note="SPCC970.12, len:113, NOTE: May not be coding; may FT fortuitously occur in rad16 3' UTR, SIMILARITY:Homo FT sapiens, O43482, opa-interacting protein oip5, (231 aa), FT fasta scores: opt: 122, E():0.051, (30.7% identity in 101 FT aa)" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c970.tab.seq.04866.out" FT misc_feature complement(514252..514266) FT /colour=6 FT /note="ctaaccccagtgaag, splice branch and acceptor" FT misc_feature complement(514287..514292) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(514329..514345) FT /colour=6 FT /note="ttaacaaaatcatgtag, splice branch and acceptor" FT misc_feature complement(514371..514376) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(514464..514481) FT /colour=6 FT /note="ctaatacaaaaattatag, splice branch and acceptor" FT misc_feature complement(514505..514510) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(514572..514588) FT /colour=6 FT /note="ttaattatttcatttag, splice branch and acceptor" FT misc_feature complement(514611..514616) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS complement(join(514906..515322,515363..515794, FT 515837..516164,516204..516552,516602..516885, FT 516936..517412,517459..517581,517635..517903)) FT /colour=2 FT /gene="rad16" FT /gene="rad10" FT /gene="rad20" FT /gene="swi9" FT /gene="SPCC970.01" FT /label=rad16 FT /note="SPCC970.01, len:892" FT /product="DNA repair protein; NER protein; similar to S. FT cerevisiae RAD1" FT /fasta_file="fasta/c970.tab.seq.00016.out" FT misc_feature complement(515323..515336) FT /colour=6 FT /note="ctgacagcttttag, splice branch and acceptor" FT misc_feature complement(515357..515362) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(515795..515807) FT /colour=6 FT /note="ctaatctaaaaag, splice branch and acceptor" FT misc_feature complement(515831..515836) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(516165..516177) FT /colour=6 FT /note="ctaataagtctag, splice branch and acceptor" FT misc_feature complement(516198..516203) FT /colour=6 FT /note="gtacgc, splice donor sequence" FT misc_feature complement(516553..516568) FT /colour=6 FT /note="ttaacaaatctttcag, splice branch and acceptor" FT misc_feature complement(516596..516601) FT /colour=6 FT /note="gtataa, splice donor sequence" FT misc_feature complement(516886..516898) FT /colour=6 FT /note="ctaactaaacaag, splice branch and acceptor" FT misc_feature complement(516930..516935) FT /colour=6 FT /note="gttcgt, splice donor sequence" FT misc_feature complement(517413..517432) FT /colour=6 FT /note="cttacatatggttcttacag, splice branch and acceptor" FT misc_feature complement(517453..517458) FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature complement(517581..517602) FT /colour=6 FT /note="ctgatttattaataattttag, splice branch and acceptor" FT misc_feature complement(517629..517634) FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature 518001..518095 FT /note="nominal overlap with cosmid SPCC10H11, S. pombe FT chromosome 3" FT misc_feature 518001..518095 FT /note="nominal overlap with cosmid SPCC970, EM:AL031530 S. FT pombe chromosome 3" FT misc_feature 518393..518441 FT /note="short region of similar to a gene free region of FT SPCC1840 S. pombe chromosome 3" FT CDS 519540..522584 FT /colour=2 FT /gene="prp11" FT /gene="SPCC10H11.01" FT /label=prp11 FT /note="SPCC10H11.01, len:1015, SIMILARITY:Rattus FT norvegicus, Q62780, RNA helicase., (1032 aa), fasta FT scores: opt: 2117, E():0, (41.7% identity in 1073 aa)" FT /product="DEAD/DEAH box RNA helicase; putative pre-mRNA FT splicing factor" FT /fasta_file="fasta/c10H11.tab.seq.05378.out" FT misc_feature 520836..521465 FT /note="Match to PF00270 DEAD, DEAD/DEAH box helicase Score FT 223.27" FT misc_feature 520923..520946 FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 521205..521255 FT /colour=8 FT /note="PS00237 G-protein coupled receptors signature" FT misc_feature 521256..521282 FT /colour=8 FT /note="PS00039 DEAD-box subfamily ATP-dependent helicases FT signature" FT misc_feature 521583..521828 FT /note="Match to PF00271 helicase_C, Helicases conserved C- FT terminal domain Score 104.07" FT misc_feature 521583..521828 FT /note="Match to PF00271 helicase_C, Helicases conserved C- FT terminal domain Score 104.07" FT rRNA 523289..523475 FT /note="5s rRNA gene" FT misc_feature 524156..524347 FT /note="Match to PF00226 DnaJ, DnaJ domain Score 92.54" FT misc_feature 524282..524341 FT /colour=8 FT /note="PS00636 Nt-DNAJ domain signature" FT misc_feature 524660..524758 FT /note="nominal overlap with plasmid SPCP31B10, EM:AL121859 FT S. pombe chromosome 3" FT misc_feature 524660..524758 FT /note="nominal overlap with cosmid SPCC10H11, S. pombe FT chromosome 3" FT CDS 525361..525792 FT /colour=10 FT /gene="SPCP31B10.02" FT /label=SPCP31B10.02 FT /note="SPCP31B10.02, len:143" FT /product="hypothetical protein; similar to S. cerevisiae FT YPL107W (low); conserved VP.KP.EP.NCC.SGC..CVW.Y..DL" FT /fasta_file="fasta/p31B10.tab.seq.05301.out" FT CDS complement(526271..526690) FT /colour=2 FT /gene="sep10" FT /gene="SPCP31B10.03c" FT /label=sep10 FT /note="SPCP31B10.03c, len:139, SIMILARITY:Caenorhabditis FT elegans., P91869, f32h2.2 protein., (163 aa), fasta FT scores: opt: 359, E():4.5e-18, (38.7% identity in 137 aa)" FT /product="putative RNA polymerase II accessory protein" FT /fasta_file="fasta/p31B10.tab.seq.05302.out" FT CDS join(527602..527665,527751..528092,528190..528647) FT /colour=8 FT /gene="SPCP31B10.04" FT /label=SPCP31B10.04 FT /note="SPCP31B10.04, len:287" FT /product="hypothetical protein; sequence orphan; confirmed FT intron; predicted N-terminal signal sequence" FT /fasta_file="fasta/p31B10.tab.seq.05303.out" FT misc_feature 527666..527671 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT intron 527666..527750 FT /colour=2 FT /note="confirmed intron" FT misc_feature 527740..527750 FT /colour=6 FT /note="ctaacctatag, splice branch and acceptor" FT misc_feature 528093..528098 FT /colour=6 FT /note="gttcgt, splice donor sequence" FT misc_feature 528175..528189 FT /colour=6 FT /note="ctaactatttttcag, splice branch and acceptor" FT CDS 529173..530783 FT /colour=7 FT /gene="SPCP31B10.05" FT /label=SPCP31B10.05 FT /note="SPCP31B10.05, len:536, SIMILARITY: low to FT YB73_YEAST, HYPOTHETICAL 62.3 kD PROTEIN, (544 aa), fasta FT scores, opt:178, E(): 0.00017, (24.8% identity in 464 aa FT overlap)" FT /product="putative Tyrosyl-DNA phosphodiesterase, involved FT in DNA repair; similar to S. cerevisiae TDP1" FT /fasta_file="fasta/p31B10.tab.seq.05304.out" FT CDS 533322..536888 FT /colour=10 FT /gene="SPCP31B10.06" FT /label=SPCP31B10.06 FT /note="SPCP31B10.06, len:1188 SIMILARITY: YMH2_YEAST FT HYPOTHETICAL 171.1 kD PROTEIN, (1545 aa), fasta scores, FT opt:223, E(): 5.7e-06, (19.1% identity in 913 aa overlap)" FT /product="C2 domain family protein; similar to S. FT cerevisiae YML072C" FT /fasta_file="fasta/p31B10.tab.seq.05305.out" FT misc_feature 534732..534995 FT /colour=9 FT /note="Pfam match to entry PF00168 C2, C2 domain," FT misc_feature 535284..535613 FT /colour=9 FT /note="Pfam match to entry PF00168 C2, C2 domain," FT CDS 537326..539854 FT /colour=2 FT /gene="eft2-2" FT /gene="SPCP31B10.07" FT /label=eft2-2 FT /note="SPCP31B10.07, len:842" FT /product="elongation factor 2" FT /fasta_file="fasta/p31B10.tab.seq.05306.out" FT misc_feature 537374..539029 FT /note="Match to PF00009 GTP_EFTU, Elongation factor Tu FT family Score 656.87" FT misc_feature 539234..539749 FT /note="Match to PF00679 EFG_C, Elongation factor G C- FT terminus Score 227.11" FT CDS complement(join(540259..540376,540567..540775)) FT /colour=2 FT /gene="rpl35a" FT /gene="rpl33" FT /gene="SPCP31B10.08c" FT /label=rpl35a FT /note="SPCP31B10.08c, len:108" FT /product="60S ribosomal protein L35a" FT /fasta_file="fasta/p31B10.tab.seq.05307.out" FT misc_feature complement(join(540280..540376,540567..540754)) FT /note="Match to PF01247 Ribosomal_L35Ae, Ribosomal protein FT L35Ae Score 174.48" FT misc_feature complement(540377..540393) FT /colour=6 FT /note="ctaacttatcgttttag, splice branch and acceptor" FT misc_feature complement(540561..540566) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 541389..541394 FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature 541553..541568 FT /colour=6 FT /note="ttaacgctagaaatag, splice branch and acceptor" FT misc_feature 543549..543797 FT /colour=9 FT /note="Pfam match to entry PF00168 C2, C2 domain," FT misc_feature 544200..546308 FT /note="nominal overlap with cosmid SPCC962, EM:AL031323 S. FT pombe chromosome 3" FT misc_feature 544512..544757 FT /colour=9 FT /note="Pfam match to entry PF00168 C2, C2 domain," FT misc_feature complement(546108..546308) FT /note="see cut17 SPCC962.02c for complete CDS" FT CDS complement(join(546108..548972,549020..549148)) FT /colour=2 FT /gene="cut17" FT /gene="pbh1" FT /gene="bir1" FT /gene="SPCC962.02c" FT /gene="SPCP31B10.10c" FT /label=cut17 FT /note="SPCC962.02c, len:997aa" FT /product="nuclear protein; localizes to kinetochores and FT spindle midzone; required for chromosome condensation FT (PMID: 11861551); required for spindle elongation (PMID: FT 11861551)" FT /fasta_file="fasta/c962.tab.seq.04520.out" FT misc_feature 544200..546308 FT /note="nominal overlap with plasmid SPAP31B10, EM:AL121859 FT S. pombe chromosome 3" FT misc_feature 544506 FT /colour=4 FT /note="left end of c2C6 (which originally had a chromosome FT I allocation) the right hand end of c2C6 is in cosmid FT c1672" FT misc_feature 544692..544937 FT /colour=9 FT /note="Pfam match to entry PF00168 C2, C2 domain" FT misc_feature 544713..544928 FT /note="Match to PF00168 C2, C2 domain Score 60.20" FT misc_feature complement(547215..547238) FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature complement(548523..548744) FT /note="Match to PF00653 BIR, Inhibitor of Apoptosis domain FT Score 121.52" FT misc_feature complement(join(548805..548972,549020..549076)) FT /note="Match to PF00653 BIR, Inhibitor of Apoptosis domain FT Score 83.05" FT misc_feature complement(548973..548987) FT /colour=6 FT /note="ctaacaagaaaatag, splice branch and acceptor" FT misc_feature complement(549014..549019) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS complement(550473..552101) FT /colour=2 FT /gene="cut15" FT /gene="SPCC962.03c" FT /label=cut15 FT /note="SPCC962.03c, len:542aa" FT /product="alpha-importin/karyopherin, serine rich RNA FT polymerase I supressor" FT /fasta_file="fasta/c962.tab.seq.04521.out" FT misc_feature complement(550758..550880) FT /note="Match to PF00514 Armadillo_seg, Armadillo/beta- FT catenin-like repeats Score 40.76" FT misc_feature complement(550893..551015) FT /note="Match to PF00514 Armadillo_seg, Armadillo/beta- FT catenin-like repeats Score 71.36" FT misc_feature complement(551019..551132) FT /note="Match to PF00514 Armadillo_seg, Armadillo/beta- FT catenin-like repeats Score 60.11" FT misc_feature complement(551145..551264) FT /note="Match to PF00514 Armadillo_seg, Armadillo/beta- FT catenin-like repeats Score 38.08" FT misc_feature complement(551271..551357) FT /note="Match to PF00514 Armadillo_seg, Armadillo/beta- FT catenin-like repeats Score 27.45" FT misc_feature complement(551397..551522) FT /note="Match to PF00514 Armadillo_seg, Armadillo/beta- FT catenin-like repeats Score 32.67" FT misc_feature complement(551526..551642) FT /note="Match to PF00514 Armadillo_seg, Armadillo/beta- FT catenin-like repeats Score 56.84" FT misc_feature complement(551652..551774) FT /note="Match to PF00514 Armadillo_seg, Armadillo/beta- FT catenin-like repeats Score 41.93" FT misc_feature complement(551799..552092) FT /note="Match to PF01749 IBB, Importin beta binding domain FT Score 152.78" FT LTR complement(552825..552963) FT /note="LTR fragment" FT CDS join(553185..553565,553648..553704) FT /colour=2 FT /gene="rps12-1" FT /gene="SPCC962.04" FT /label=rps12-1 FT /note="SPCC962.04, len:145aa" FT /product="40S ribosomal protein S12" FT /fasta_file="fasta/c962.tab.seq.04522.out" FT misc_feature join(553239..553565,553648..553698) FT /note="Match to PF01164 Ribosomal_S12e, Ribosomal protein FT S12e Score 235.29" FT misc_feature 553278..553322 FT /colour=8 FT /note="PS01189 Ribosomal protein S12e signature" FT misc_feature 553566..553571 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT intron 553566..553647 FT /colour=2 FT /note="confirmed intron" FT misc_feature 553632..553647 FT /colour=6 FT /note="ctaacatgtaatttag, splice branch and acceptor" FT CDS join(554521..554722,554792..556200) FT /colour=8 FT /gene="SPCC962.05" FT /label=SPCC962.05 FT /note="SPCC962.05, len:536aa" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c962.tab.seq.04523.out" FT misc_feature 554723..554728 FT /colour=6 FT /note="gtaggt, splice donor sequence" FT misc_feature 554782..554791 FT /colour=6 FT /note="ttaattgaag, splice branch and acceptor" FT CDS complement(join(556396..558128,558175..558205)) FT /colour=2 FT /gene="bpb1" FT /gene="sf1" FT /gene="SPCC962.06c" FT /label=bpb1 FT /note="SPCC962.06c, len:587aa, similarity: H. sapiens, FT Q927 45, Mammalian splicing factor SF1, (639aa), fasta FT scores, o pt:1053, E():1.3e-30, (36.8% identity in 532 aa FT overlap)" FT /product="zinc finger protein; zf-CCHC type (zinc FT knuckle); putative transcription or splicing factor" FT /fasta_file="fasta/c962.tab.seq.04524.out" FT misc_feature complement(557110..557160) FT /note="Match to PF00098 zf-CCHC, zinc finger, CCHC class FT Score 29.72" FT misc_feature complement(557228..557281) FT /colour=9 FT /note="Pfam match to entry PF00098 zf-CCHC, zinc finger, FT CCHC class, score 15.80, E-value 0.061" FT misc_feature complement(557455..557559) FT /note="Match to PF00013 KH-domain, KH domain Score 21.92" FT misc_feature complement(558129..558141) FT /colour=6 FT /note="ttaatatttttag, splice branch and acceptor" FT intron complement(558129..558174) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(558169..558174) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(558430..558439) FT /colour=4 FT /note="discrepancy: in cosmid c2C2 this has only 9 A's" FT misc_feature 558489..560336 FT /note="nominal overlap with cosmid SPCC1672, EM:AL031324 FT S. pombe chromosome 3" FT misc_feature join(560067..560098,560215..560336) FT /fasta_file="c962.seq.0008.out" FT /label=SPCC962.07 FT /note="SPCC962.07, for complete CDS see SPCC1672.01 cosmid FT c1672" FT CDS join(560067..560098,560215..560341,560516..561277) FT /EC_number="3.1.3.15" FT /colour=7 FT /gene="SPCC1672.01" FT /label=SPCC1672.01 FT /note="SPCC1672.01, len:306aa, similarity: yeast, YFR025C, FT HIS9_YEAST, histidinol-phosphatase, (335aa), fasta scores, FT opt:306, E():0, (33.3% identity in 330 aa overlap)" FT /product="putative histidinol-phosphatase; histidine FT metabolism; similar to S. cerevisiae HIS2" FT /fasta_file="fasta/c1672.tab.seq.04832.out" FT misc_feature complement(558489..560336) FT /note="nominal overlap with cosmid SPCC962, EM:AL031323 S. FT pombe chromosome 3" FT misc_feature 560099..560104 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 560199..560214 FT /colour=6 FT /note="ctaacttttattgaag, splice branch and acceptor" FT misc_feature 560342..560347 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 560497..560515 FT /colour=6 FT /note="ctaactatgattcatttag, splice branch and acceptor" FT CDS complement(562353..563117) FT /colour=2 FT /gene="sap1" FT /gene="SPCC1672.02c" FT /label=sap1 FT /note="SPCC1672.02c, len:254aa" FT /product="switch-activating protein 1" FT /fasta_file="fasta/c1672.tab.seq.04833.out" FT CDS complement(565891..567474) FT /EC_number="3.5.4.3" FT /colour=7 FT /gene="SPCC1672.03c" FT /label=SPCC1672.03c FT /note="SPCC1672.03c, len:527aa, similarity: YDL238C, FT YD3C_Y EAST, hypothetical 55.2 kD protein, (489aa), fasta FT scores, opt:1131, E():0, (43.6% identity in 473 aa FT overlap)" FT /product="putative guanine deaminase" FT /fasta_file="fasta/c1672.tab.seq.04834.out" FT CDS complement(join(568700..568953,569021..569072)) FT /colour=7 FT /gene="SPCC1672.04c" FT /label=SPCC1672.04c FT /note="SPCC1672.04c, len:101aa" FT /product="putative requirement for cytochrome c oxidase FT assembly/activity; similar to S. cerevisiae COX19 (low)" FT /fasta_file="fasta/c1672.tab.seq.04835.out" FT misc_feature complement(568954..568971) FT /colour=6 FT /note="ctaatacttgtcgtgcag, splice branch and acceptor" FT misc_feature complement(569015..569020) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS complement(570243..571448) FT /EC_number="6.1.1.1" FT /colour=2 FT /gene="SPCC1672.05c" FT /label=SPCC1672.05c FT /note="SPCC1672.05c, len:401aa" FT /product="tyrosyl-tRNA synthetase cytoplasmic" FT /fasta_file="fasta/c1672.tab.seq.04836.out" FT misc_feature complement(570363..571418) FT /colour=9 FT /note="Pfam match to entry PF00579 tRNA-synt_1b, tRNA FT synth etases class I (Trp and Tyr)" FT CDS complement(571710..574472) FT /colour=10 FT /gene="SPCC1672.06c" FT /label=SPCC1672.06c FT /note="SPCC1672.06c, unknown, len:920aa, similarity: S. FT cer evisiae, YLR410w, Q06685, chromosome xii cosmid 9931.7, FT (11 46aa), fasta scores, opt:2648, E():0, (52.5% FT identity in 96 2 aa overlap)" FT /product="conserved protein" FT /fasta_file="fasta/c1672.tab.seq.04837.out" FT CDS join(575537..575612,575672..578304) FT /colour=10 FT /gene="SPCC1672.07" FT /label=SPCC1672.07 FT /note="SPCC1672.07, len:902aa, similarity: S. cerevisiae, FT Y LR409C, Q06078, similar to transcriptional repressor FT protei n, (939aa), fasta scores, opt:1395, E():0, (40.3% FT identity in 950 aa overlap)" FT /product="WD repeat protein" FT /fasta_file="fasta/c1672.tab.seq.04838.out" FT misc_feature 575613..575618 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 575656..575671 FT /colour=6 FT /note="ctaactgtatttttag, splice branch and acceptor" FT misc_feature 576121..576165 FT /colour=8 FT /note="PS00678 Trp-Asp (WD) repeats signature" FT misc_feature 577105..577149 FT /colour=8 FT /note="PS00678 Trp-Asp (WD) repeats signature" FT misc_feature 577220..577336 FT /colour=9 FT /note="Pfam match to entry PF00400 G-beta, WD domain, G- FT bet a repeats" FT misc_feature 577354..577398 FT /colour=8 FT /note="PS00678 Trp-Asp (WD) repeats signature" FT tRNA 578847..578919 FT /note="tRNA Arg anticodon TCT" FT CDS complement(579456..580313) FT /colour=2 FT /gene="tfa2" FT /gene="SPCC1672.08c" FT /label=tfa2 FT /note="SPCC1672.08c, len:285aa" FT /product="transcription initiation factor TFIIE beta FT subunit (TFIIE-BETA)" FT /fasta_file="fasta/c1672.tab.seq.04839.out" FT CDS join(580593..580627,580666..581122,581239..581626, FT 581672..582195) FT /colour=7 FT /gene="SPCC1672.09" FT /label=SPCC1672.09 FT /note="SPCC1672.09, len:467aa, similarity: S.cerevisiae, FT YK L140W, TGL1_YEAST, triglyceride lipase-cholesterol FT esterase , (548aa), fasta scores, opt:1176, E():0, (44.6% FT identity i n 435 aa overlap)" FT /product="triglyceride lipase-cholesterol esterase" FT /fasta_file="fasta/c1672.tab.seq.04840.out" FT misc_feature 580628..580633 FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature 580653..580665 FT /colour=6 FT /note="ctgacaaataaag, splice branch and acceptor" FT misc_feature 581073..581891 FT /colour=9 FT /note="Pfam match to entry PF00561 abhydrolase, alpha/beta FT hydrolase fold" FT misc_feature 581123..581128 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 581224..581238 FT /colour=6 FT /note="ctaattgtgcttaag, splice branch and acceptor" FT misc_feature 581627..581632 FT /colour=6 FT /note="gtacgg, splice donor sequence" FT misc_feature 581655..581671 FT /colour=6 FT /note="ctgacatttttatccag, splice branch and acceptor" FT CDS join(584135..584219,584292..584397,584486..585587) FT /colour=7 FT /gene="SPCC1672.10" FT /label=SPCC1672.10 FT /note="SPCC1672.10, len:430aa, similar eg. to , G3309245, FT r etinoblastoma a associated protein, (425aa), fasta FT scores, opt:1438, E():0, (52.2% identity in 414 aa FT overlap), also s imilar eg. to , RB48_HUMAN, , chromatin FT assembly factor 1 p 48 subunit ca (, (425aa), fasta scores, FT opt:1436, E():0, (5 3.1% identity in 401 aa overlap)" FT /product="WD repeat protein; putative chromosome assembly FT factor" FT /fasta_file="fasta/c1672.tab.seq.04841.out" FT misc_feature 584220..584225 FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature 584270..584291 FT /colour=6 FT /note="ctgacgattatactcgtttcag, splice branch and acceptor" FT misc_feature 584398..584403 FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature 584468..584485 FT /colour=6 FT /note="ctaactcgattcttgaag, splice branch and acceptor" FT misc_feature 584648..584767 FT /colour=9 FT /note="Pfam match to entry PF00400 G-beta, WD domain, G- FT bet a repeats" FT misc_feature 584886..584930 FT /colour=8 FT /note="PS00678 Trp-Asp (WD) repeats signature" FT misc_feature 584945..585064 FT /colour=9 FT /note="Pfam match to entry PF00400 G-beta, WD domain, G- FT bet a repeats" FT misc_feature 585077..585196 FT /colour=9 FT /note="Pfam match to entry PF00400 G-beta, WD domain, G- FT bet a repeats" FT misc_feature 585183..585227 FT /colour=8 FT /note="PS00678 Trp-Asp (WD) repeats signature" FT misc_feature 585336 FT /colour=4 FT /note="real end of cosmid c962 and incorrectly named c2C6 FT ( originally thought to be on chromosome I)" FT CDS complement(585906..589853) FT /colour=7 FT /gene="SPCC1672.11c" FT /label=SPCC1672.11c FT /note="SPCC1672.11c, len:1315aa, similarity:. S. FT cerevisiae , YOR291W, ATC9_YEAST, putative calcium- FT transporting atpase , (1472aa), fasta scores, opt:2767, FT E():0, (45.6% identity in 1343 aa overlap)" FT /product="P-type proton ATPase" FT /fasta_file="fasta/c1672.tab.seq.04842.out" FT misc_feature complement(586749..586817) FT /colour=8 FT /note="PS01229 Hypothetical cof family signature 2" FT misc_feature complement(586761..586913) FT /colour=9 FT /note="Pfam match to entry PF00122 E1-E2_ATPase, E1-E2 FT ATPa ses" FT misc_feature complement(588510..588689) FT /colour=9 FT /note="Pfam match to entry PF00122 E1-E2_ATPase, E1-E2 FT ATPa ses" FT misc_feature complement(590458..590479) FT /colour=6 FT /note="ctaacaaatttttttactacag, splice branch and acceptor" FT misc_feature complement(590560..590565) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature complement(590952..590967) FT /colour=6 FT /note="ttaacacataatatag, splice branch and acceptor" FT misc_feature complement(590991..590996) FT /colour=6 FT /note="gtacga, splice donor sequence" FT misc_feature complement(591068..591081) FT /colour=6 FT /note="ctaatgatgaatag, splice branch and acceptor" FT misc_feature complement(591177..591182) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(591259..591269) FT /colour=6 FT /note="ctaattcacag, splice branch and acceptor" FT misc_feature complement(591316..591321) FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature complement(591483..591506) FT /colour=6 FT /note="ttgatcaatgaataaccgagcaag, splice branch and FT acceptor" FT misc_feature complement(591516..591521) FT /colour=6 FT /note="gtaggt, splice donor sequence" FT misc_feature 591562..594487 FT /note="nominal overlap with cosmid SPCC1183, EM:AL031740 FT S. pombe chromosome 3" FT misc_feature complement(591576..591587) FT /colour=6 FT /note="ttgacaatttag, splice branch and acceptor" FT misc_feature complement(591617..591622) FT /colour=6 FT /note="gtaatg, splice donor sequence" FT misc_feature 591885..591890 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 591910..591924 FT /colour=6 FT /note="ttgataaattggtag, splice branch and acceptor" FT misc_feature 592087..592092 FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature 592120..592133 FT /colour=6 FT /note="cttacaattattag, splice branch and acceptor" FT misc_feature 592254..592259 FT /colour=6 FT /note="gtgagc, splice donor sequence" FT misc_feature 592337..592352 FT /colour=6 FT /note="ctaacaattgtatcag, splice branch and acceptor" FT misc_feature 592792..592797 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 592811..592819 FT /colour=6 FT /note="ttaacattttcag, splice branch and acceptor" FT CDS complement(join(590326..590457,590566..590951, FT 590997..591067,591183..591258,591322..591482, FT 591522..591575,591623..591654)) FT /colour=10 FT /gene="SPCC1672.12c" FT /label=SPCC1672.12c FT /note="SPCC1672.12c, len:303aa, similarity: S. cerevisiae, FT YOR164C, Q12125, hypothetical protein (312aa), fasta score FT s, opt:447, E():8.3e-21, (29.8% identity in 295 aa FT overlap)" FT /product="conserved protein" FT /fasta_file="fasta/c1672.tab.seq.04843.out" FT misc_feature complement(591562..591654) FT /note="SPCC1672.12c, see c1672 for complete CDS" FT misc_feature 591562..594487 FT /note="nominal overlap with cosmid SPCC1672, EM:AL031324 FT S.pombe chromosome 3" FT misc_feature 591885..591890 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 591910..591924 FT /colour=6 FT /note="ttgataaattggtag, splice branch and acceptor" FT misc_feature 592087..592092 FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature 592120..592133 FT /colour=6 FT /note="cttacaattattag, splice branch and acceptor" FT misc_feature 592254..592259 FT /colour=6 FT /note="gtgagc, splice donor sequence" FT misc_feature 592337..592352 FT /colour=6 FT /note="ctaacaattgtatcag, splice branch and acceptor" FT misc_feature 592792..592797 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 592819..592831 FT /colour=6 FT /note="ttaacattttcag, splice branch and acceptor" FT CDS join(595060..595212,595493..596002) FT /colour=7 FT /gene="SPCC1183.02" FT /label=SPCC1183.02 FT /note="SPCC1183.02, len:220, SIMILARITY: to the N-terminal FT part of Schizosaccharomyces pombe, EF1G_SCHPO, elongation FT f actor 1-gamma, (409 aa), fasta scores: opt: 432, FT E():4.3e-2 7, (35.9% identity in 223 aa)" FT /product="glutathione S-transferase; similar to the N- FT terminal of translation elongation factors" FT /fasta_file="fasta/c1183.tab.seq.04846.out" FT misc_feature 595213..595218 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 595478..595492 FT /colour=6 FT /note="ctaattaattactag, splice branch and acceptor" FT misc_feature 595493..595939 FT /note="Match to PF00043 GST, Glutathione S-transferases. FT Score 51.39" FT CDS complement(join(596368..596512,596667..596761, FT 596842..597078)) FT /colour=7 FT /gene="SPCC1183.03c" FT /label=SPCC1183.03c FT /note="SPCC1183.03c, len:158, SIMILARITY:Saccharomyces FT cere visiae, ydl120w, Q07540, regulates mitochondrial iron FT accum ulation, (174 aa), fasta scores: opt: 271, E():2.2e- FT 17, (44 .7% identity in 103 aa)" FT /product="putative regulator of mitochondrial iron FT accumulation; human frataxin homolog" FT /fasta_file="fasta/c1183.tab.seq.04847.out" FT misc_feature complement(join(596386..596512,596667..596761, FT 596842..596955)) FT /note="Match to PF01491 Frataxin_Cyay, Frataxin-like FT domain Score 200.59" FT misc_feature complement(596513..596527) FT /colour=6 FT /note="ctaacctaaaaccag, splice branch and acceptor" FT misc_feature complement(596661..596666) FT /colour=6 FT /note="gtaggt, splice donor sequence" FT misc_feature complement(596762..596779) FT /colour=6 FT /note="ctaacactagatttgcag, splice branch and acceptor" FT misc_feature complement(596836..596841) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS complement(join(597614..599046,599096..599237)) FT /colour=7 FT /gene="SPCC1183.04c" FT /label=SPCC1183.04c FT /note="SPCC1183.04c, len:524, SIMILARITY:Saccharomyces FT cere visiae, YOR017W, PT27_YEAST, mitochondrial FT translation syst em component pet127, (800 aa), fasta FT scores: opt: 418, E(): 0, (39.4% identity in 322 aa)" FT /product="putative mitochondrial translation system FT component" FT /fasta_file="fasta/c1183.tab.seq.04848.out" FT misc_feature complement(599047..599067) FT /colour=6 FT /note="ctaactaatttatttttgtag, splice branch and acceptor" FT misc_feature complement(599090..599095) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS complement(join(599310..599379,599654..600061, FT 600101..600209,600247..600378,600416..600679, FT 600728..601885,601940..602161,602227..602326, FT 602367..602429,602558..602803)) FT /colour=2 FT /gene="lig4" FT /gene="SPCC1183.05c" FT /label=lig4 FT /note="SPCC1183.05c, len:923, C term possibly incorrectly FT pre dicted., SIMILARITY:Homo sapiens, DNL4_HUMAN, DNA FT ligase iv , (844 aa), fasta scores: opt: 977, E():0, FT (32.0% identity in 694 aa)" FT /product="DNA ligase; DNA repair protein" FT /fasta_file="fasta/c1183.tab.seq.04849.out" FT misc_feature complement(600045..600073) FT /colour=6 FT /note="ctaaccaattagtcttctcttttctaaag, splice branch and FT acc eptor" FT misc_feature complement(600205..600210) FT /colour=6 FT /note="gtatct, splice donor sequence" FT misc_feature complement(600379..600390) FT /colour=6 FT /note="ctaactctttag, splice branch and acceptor" FT misc_feature complement(600410..600415) FT /colour=6 FT /note="gtaggt, splice donor sequence" FT misc_feature complement(join(600627..600679,600728..601721)) FT /note="Match to PF01068 DNA_ligase, DNA ligase Score FT 220.20" FT misc_feature complement(600680..600696) FT /colour=6 FT /note="ctaatctcttaatacag, splice branch and acceptor" FT misc_feature complement(600722..600727) FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature complement(601886..601906) FT /colour=6 FT /note="ctaacttttttatttctttag, splice branch and acceptor" FT misc_feature complement(601934..601939) FT /colour=6 FT /note="gttggt, splice donor sequence" FT misc_feature complement(602162..602180) FT /colour=6 FT /note="ttaactgaaaaaaatttag, splice branch and acceptor" FT misc_feature complement(602221..602226) FT /colour=6 FT /note="gtgtgt, splice donor sequence" FT misc_feature complement(602327..602338) FT /colour=6 FT /note="ctaattaacaag, splice branch and acceptor" FT misc_feature complement(602361..602366) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(602430..602441) FT /colour=6 FT /note="ctaattttctag, splice branch and acceptor" FT misc_feature complement(602552..602557) FT /colour=6 FT /note="gtattt, splice donor sequence" FT CDS join(603037..603263,603321..603653,603721..604129) FT /colour=2 FT /gene="ung1" FT /gene="SPCC1183.06" FT /label=ung1 FT /note="SPCC1183.06, len:322, SIMILARITY:Saccharomyces FT cerev isiae, UNG_YEAST, uracil-DNA glycosylase , (359 aa ), FT fasta scores: opt: 741, E():0, (47.2% identity in 320 aa FT )" FT /product="uracil-DNA glycosylase" FT /fasta_file="fasta/c1183.tab.seq.04850.out" FT misc_feature 603264..603269 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 603308..603320 FT /colour=6 FT /note="ttaacctatttag, splice branch and acceptor" FT misc_feature join(603442..603653,603721..604063) FT /note="Match to PF00315 UNG, Uracil-DNA glycosylase Score FT 278.35" FT misc_feature 603654..603659 FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature 603709..603720 FT /colour=6 FT /note="ctaatgaagcag, splice branch and acceptor" FT CDS 606337..611409 FT /colour=7 FT /gene="SPCC1183.07" FT /label=SPCC1183.07 FT /note="SPCC1183.07, len:1690, SIMILARITY:Saccharomyces FT cere visiae, RRP5_YEAST, rRNA biogenesis protein rrp5, FT (1729 aa) , fasta scores: opt: 2863, E():0, (34.7% FT identity in 1764 a a)" FT /product="putative rRNA biogenesis protein; rrp5 homolog; FT multiple S1 RNA binding domain protein" FT /fasta_file="fasta/c1183.tab.seq.04851.out" FT misc_feature 607798..608013 FT /note="Match to PF00575 S1, S1 RNA-binding domain Score FT 31.81" FT misc_feature 608086..608280 FT /note="Match to PF00575 S1, S1 RNA-binding domain Score FT 42.59" FT misc_feature 608605..608820 FT /note="Match to PF00575 S1, S1 RNA-binding domain Score FT 27.93" FT misc_feature 609481..609702 FT /note="Match to PF00575 S1, S1 RNA-binding domain Score FT 21.98" FT misc_feature 609763..609984 FT /note="Match to PF00575 S1, S1 RNA-binding domain Score FT 26.01" FT misc_feature 610036..610257 FT /note="Match to PF00575 S1, S1 RNA-binding domain Score FT 55.97" FT CDS complement(611900..612550) FT /colour=2 FT /gene="rpl1-1" FT /gene="rpl10a-1" FT /gene="SPCC1183.08c" FT /label=rpl10a-1 FT /note="SPCC1183.08c, len:216" FT /product="60S ribosomal protein L10a" FT /fasta_file="fasta/c1183.tab.seq.04852.out" FT misc_feature complement(611915..612514) FT /note="Match to PF00687 Ribosomal_L1, L1P family of FT ribosomal proteins Score 229.91" FT CDS complement(join(613345..613564,613628..613725)) FT /colour=10 FT /gene="SPCC1183.09c" FT /label=SPCC1183.09c FT /note="SPCC1183.09c, len:105, SIMILARITY:Saccharomyces FT cere visiae, YDL123W, YD23_YEAST, hypothetical protein FT (140 aa) , fasta scores: opt: 175, E():7.5e-06, (47.4% FT identity in 5 7 aa)" FT /product="hypothetical protein; UPF0057 family; contains FT predicted N-terminal signal sequence" FT /fasta_file="fasta/c1183.tab.seq.04853.out" FT misc_feature complement(join(613498..613564,613628..613707)) FT /note="Match to PF01679 UPF0057, Uncharacterized protein FT family Score 26.20" FT misc_feature complement(613565..613579) FT /colour=6 FT /note="ctgactttattttag, splice branch and acceptor" FT misc_feature complement(613622..613627) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT LTR 614910..615258 FT /colour=4 FT /note="tf2 type LTR" FT CDS join(615605..615743,615913..616158,616208..616480, FT 616522..616563,616613..616689) FT /colour=3 FT /gene="wtf7" FT /gene="SPCC1183.10" FT /label=wft7 FT /note="SPCC1183.10, len:258" FT /product="hypothetical wtf protein" FT /fasta_file="fasta/c1183.tab.seq.04854.out" FT misc_feature 615744..615749 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 615900..615912 FT /colour=6 FT /note="ttaatttaaacag, splice branch and acceptor" FT misc_feature 616159..616164 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 616196..616207 FT /colour=6 FT /note="ctaactcattag, splice branch and acceptor" FT misc_feature 616481..616486 FT /colour=6 FT /note="gtttgt, splice donor sequence" FT misc_feature 616510..616521 FT /colour=6 FT /note="ttaacaatacag, splice branch and acceptor" FT misc_feature 616564..616569 FT /colour=6 FT /note="gtaaat, splice donor sequence" FT misc_feature 616599..616612 FT /colour=6 FT /note="ctaattatcattag, splice branch and acceptor" FT misc_feature 620126..623561 FT /note="nominal overlap with cosmid SPCC31H12, EM:AL031824 FT S. pombe chromosome 3" FT misc_feature 620126..623561 FT /note="nominal overlap with cosmid SPCC1183, EM:AL031740 FT S. pombe chromosome 3" FT CDS complement(623607..624527) FT /colour=7 FT /gene="SPCC31H12.02c" FT /label=SPCC31H12.02c FT /note="SPCC31H12.02c, len:306, SIMILARITY:Saccharomyces FT cer evisiae, YBR054W, YRO2_YEAST, yro2 protein, (344 aa), FT fasta scores: opt: 321, E():6.9e-17, (28.8% identity in FT 240 aa)" FT /product="conserved protein; similar to S. cerevisiae FT YBR054W ; similar to heatshock protein" FT /fasta_file="fasta/c31H12.tab.seq.05003.out" FT CDS complement(625488..626225) FT /colour=10 FT /gene="SPCC31H12.03c" FT /label=SPCC31H12.03c FT /note="SPCC31H12.03c, len:245, SIMILARITY:Saccharomyces FT cer evisiae, YEP3_YEAST, HYPOTHETICAL PROTEIN, (218 aa), FT fasta scores, opt:198, E(): 1.8e-07,(27.0% identity in 226 FT aa ove rlap)" FT /product="conserved protein" FT /fasta_file="fasta/c31H12.tab.seq.05004.out" FT CDS complement(join(627212..627697,627793..627804)) FT /colour=2 FT /gene="rpl12-2" FT /gene="SPCC31H12.04c" FT /label=rpl12-2 FT /note="SPCC31H12.04c, len:161" FT /product="60S ribosomal protein L12" FT /fasta_file="fasta/c31H12.tab.seq.05005.out" FT misc_feature complement(627275..627322) FT /colour=8 FT /note="PS00359 Ribosomal protein L11 signature" FT misc_feature complement(627278..627664) FT /note="Match to PF00298 Ribosomal_L11, Ribosomal protein FT L11 Score 186.52" FT misc_feature complement(627698..627713) FT /colour=6 FT /note="ctaaccttttag, splice branch and acceptor" FT misc_feature complement(627787..627792) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS complement(join(628996..629094,629146..629847, FT 630218..630342,630401..630443)) FT /EC_number="3.1.3.16" FT /colour=2 FT /gene="sds21" FT /gene="SPCC31H12.05c" FT /label=sds21 FT /note="SPCC31H12.05c, len:322" FT /product="serine-threonine protein phosphatase pp1-2" FT /fasta_file="fasta/c31H12.tab.seq.05006.out" FT misc_feature complement(629095..629111) FT /colour=6 FT /note="ttaatactatgttttag, splice branch and acceptor" FT misc_feature complement(629140..629145) FT /colour=6 FT /note="gtgagt, splice donor sequence" FT misc_feature complement(629143..629847) FT /note="Match to PF00149 STphosphatase, Ser/Thr protein FT phosphatase Score 594.38" FT misc_feature complement(629650..629667) FT /colour=8 FT /note="PS00125 Serine/threonine specific protein FT phosphatas es signature" FT misc_feature complement(629848..629861) FT /colour=6 FT /note="ctaataaataacag, splice branch and acceptor" FT misc_feature complement(630212..630217) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature complement(join(630215..630342,630401..630431)) FT /note="Match to PF00149 STphosphatase, Ser/Thr protein FT phosphatase Score 32.71" FT misc_feature complement(630343..630359) FT /colour=6 FT /note="ctaacctcgtatcttag, splice branch and acceptor" FT misc_feature complement(630395..630400) FT /colour=6 FT /note="gtttgt, splice donor sequence" FT CDS 632248..633654 FT /colour=8 FT /gene="SPCC31H12.06" FT /label=SPCC31H12.06 FT /note="SPCC31H12.06, len:468" FT /product="hypothetical protein; sequence orphan; contains FT 12 predicted transmembrane helices; predicted N-terminal FT signal sequence" FT /fasta_file="fasta/c31H12.tab.seq.05007.out" FT misc_feature 634340..634345 FT /colour=6 FT /note="gtgagt, splice donor sequence" FT misc_feature 634373..634388 FT /colour=6 FT /note="ctgaccttgtttatag, splice branch and acceptor" FT misc_feature 634561..634566 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 634605..634619 FT /colour=6 FT /note="ctaacaacattatag, splice branch and acceptor" FT misc_feature 634652..634657 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 634701..634716 FT /colour=6 FT /note="ctgacatatattctag, splice branch and acceptor" FT misc_feature 636569..640139 FT /note="nominal overlap with cosmid SPCC5E4, EM:AL033406 S. FT pombe chromosome 3" FT misc_feature complement(638853..638921) FT /note="Match to PF00560 LRR, Leucine Rich Repeat Score FT 20.15" FT misc_feature complement(638922..638987) FT /note="Match to PF00560 LRR, Leucine Rich Repeat Score FT 22.68" FT misc_feature 636569..640139 FT /note="nominal overlap with cosmid SPCC31H12, EM:AL031824 FT S. pombe chromosome 3" FT misc_feature complement(638853..638921) FT /note="Match to PF00560 LRR, Leucine Rich Repeat Score FT 20.15" FT misc_feature complement(638922..638987) FT /note="Match to PF00560 LRR, Leucine Rich Repeat Score FT 22.68" FT CDS complement(join(640145..640241,640292..640556, FT 640606..640774,640831..641924,642138..642444)) FT /colour=2 FT /gene="taf72" FT /gene="SPCC5E4.03c" FT /label=taf72 FT /note="SPCC5E4.03c, len:643" FT /product="transcription initiation factor TFIID subunit; FT TAF(II) complex (TBP-associated protein complex); putative FT SAGA complex; possibly involved in chromatin architecture; FT transcriptional activator; similar to S. cerevisiae TAF90; FT suppresses defects in the Anaphase-promoting Complex; FT required for cell viability (PMID: 11279037); FT overexpression suppresses the cell cycle arrest in mitosis FT caused by a mutation in the anaphase-promoting FT complex/cyclosome subunit gene cut9 (PMID: 11279037); FT possible role of WD repeat-containing TAFs in the FT expression of genes involved in progression through the M FT phase of the cell cycle (PMID: 11279037); WD repeat FT protein (5)" FT /fasta_file="fasta/c5E4.tab.seq.05012.out" FT misc_feature complement(640242..640258) FT /colour=6 FT /note="ctaaccttctcaaacag, splice branch and acceptor" FT misc_feature complement(640286..640291) FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature complement(640399..640443) FT /colour=8 FT /note="PS00678 Trp-Asp (WD) repeats signature" FT misc_feature complement(640402..640518) FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 43.30" FT misc_feature complement(640557..640571) FT /colour=6 FT /note="ctaatttgattaaag, splice branch and acceptor" FT misc_feature complement(640600..640605) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(640604..640693) FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 29.54" FT misc_feature complement(640703..640774) FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 32.59" FT misc_feature complement(640775..640789) FT /colour=6 FT /note="ctgacttgtatttag, splice branch and acceptor" FT misc_feature complement(640825..640830) FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature complement(640885..640983) FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 35.53" FT misc_feature complement(640972..641088) FT /colour=9 FT /note="Pfam match to entry PF00400 G-beta, WD domain, G- FT bet a repeat" FT misc_feature complement(641011..641100) FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 36.09" FT misc_feature complement(641925..641938) FT /colour=6 FT /note="ctaacgtgctatag, splice branch and acceptor" FT misc_feature complement(642132..642137) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS join(643812..645901,645941..646242,646284..646578, FT 646617..649416) FT /colour=2 FT /gene="cut1" FT /gene="SPCC5E4.04" FT /label=cut1 FT /note="SPCC5E4.04, len:1828" FT /product="separin; required for sister chromatid FT separation in mitosis; promotes anaphase; similar to S. FT cerevisiae ESP1" FT /fasta_file="fasta/c5E4.tab.seq.05013.out" FT misc_feature 645660..645683 FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 645902..645907 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 645930..645940 FT /colour=6 FT /note="ctgacatttag, splice branch and acceptor" FT misc_feature 646243..646248 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 646270..646283 FT /colour=6 FT /note="ctaattgtttatag, splice branch and acceptor" FT misc_feature 646579..646584 FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature 646604..646616 FT /colour=6 FT /note="ctaacgagctcag, splice branch and acceptor" FT CDS complement(649656..650792) FT /colour=7 FT /gene="SPCC5E4.05c" FT /label=SPCC5E4.05c FT /note="SPCC5E4.05c, len:378, SIMILARITY:Saccharomyces FT cerevisiae, YKJ4_YEAST, hypothetical 35.5 kD protein in FT cwp1-mbr1 intergenic region., (313 aa), fasta scores: opt: FT 459, E():7.8e-19, (31.2% identity in 269 aa)" FT /product="putative abhydrolase; putative phosphoslipase" FT /fasta_file="fasta/c5E4.tab.seq.05014.out" FT misc_feature complement(649992..650660) FT /colour=9 FT /note="Pfam match to entry PF00561 abhydrolase, alpha/beta FT hydrolase fold" FT CDS complement(join(651622..651905,651973..651994)) FT /colour=8 FT /gene="SPCC5E4.10c" FT /label=SPCC5E4.10c FT /note="SPCC5E4.10c, len:101" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c5E4.tab.seq.05015.out" FT misc_feature complement(651906..651920) FT /colour=6 FT /note="ctaatttctttgtag, splice branch and acceptor" FT misc_feature complement(651967..651972) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS join(652783..652893,653000..656311) FT /colour=2 FT /gene="rad18" FT /gene="SPCC5E4.06" FT /label=rad18 FT /note="SPCC5E4.06, len:1140" FT /product="DNA repair protein; require for DNA damage FT responses (PMID: 1152371) similar to S. cerevisiae RHC18" FT /fasta_file="fasta/c5E4.tab.seq.05016.out" FT misc_feature 652894..652899 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 652979..652999 FT /colour=6 FT /note="ttaatattttatttttaatag, splice branch and acceptor" FT misc_feature 653213..653290 FT /note="Match to PF00470 RecF, RecF protein Score 22.39" FT misc_feature 653258..653281 FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 654608..654643 FT /colour=8 FT /note="PS00192 Cytochrome b/b6 heme-ligand signature" FT CDS 656625..657071 FT /colour=2 FT /gene="rpl28-2" FT /gene="SPCC5E4.07" FT /label=rpl28-2 FT /note="SPCC5E4.07, len:148" FT /product="60S ribosomal protein L27a.2/L28A" FT /fasta_file="fasta/c5E4.tab.seq.05017.out" FT misc_feature 656952..657050 FT /colour=9 FT /note="Pfam match to entry PF00256 L15, Ribosomal protein FT L 15" FT misc_feature 657833..659568 FT /note="nominal overlap with cosmid SPCC16C4, EM:AL031535 FT S. pombe chromosome 3" FT misc_feature 659140..659145 FT /colour=6 FT /note="gttagt, splice donor sequence" FT misc_feature 659208..659222 FT /colour=6 FT /note="ctaacattataacag, splice branch and acceptor" FT misc_feature 659489..659494 FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature 659546..659566 FT /colour=6 FT /note="ttaacatttgtaatttttag, splice branch and acceptor" FT misc_feature 657833..659568 FT /note="nominal overlap with cosmid SPCC5E4, EM:AL033406 S. FT pombe chromosome 3" FT misc_feature 659140..659145 FT /colour=6 FT /note="gttagt, splice donor sequence" FT misc_feature 659208..659222 FT /colour=6 FT /note="ctaacattataacag, splice branch and acceptor" FT misc_feature 659489..659494 FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature 659547..659566 FT /colour=6 FT /note="ttaacatttgtaatttttag, splice branch and acceptor" FT misc_feature 659629..659634 FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature 659696..659708 FT /colour=6 FT /note="ctaacagatatag, splice branch and acceptor" FT CDS complement(join(660851..661044,661097..661124, FT 661170..661181)) FT /colour=8 FT /gene="SPCC16C4.20c" FT /label=SPCC16C4.20c FT /note="SPCC16C4.20c, len:77" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c16C4.tab.seq.04975.out" FT misc_feature complement(661045..661064) FT /colour=6 FT /note="ctaatgaactcgacgtatag, splice branch and acceptor" FT intron complement(661045..661096) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(661091..661096) FT /colour=6 FT /note="gtgtgt, splice donor sequence" FT misc_feature complement(661125..661136) FT /colour=6 FT /note="ttgaccgcgtag, splice branch and acceptor" FT misc_feature complement(661164..661169) FT /colour=6 FT /note="gtagga, splice donor sequence" FT CDS complement(662342..663988) FT /colour=8 FT /gene="SPCC16C4.02c" FT /label=SPCC16C4.02c FT /note="SPCC16C4.02c, len:548" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c16C4.tab.seq.04976.out" FT CDS join(664668..665068,665214..665340) FT /EC_number="5.2.1.8" FT /colour=2 FT /gene="pin1" FT /gene="SPCC16C4.03" FT /label=pin1 FT /note="SPCC16C4.03, len:175, SIMILARITY:Emericella FT nidulans , O42735, peptidyl-prolyl cis/trans isomerase., FT (176 aa), f asta scores: opt: 666, E():0, (57.5% identity FT in 174 aa)" FT /product="WW domain containing peptidyl-prolyl cis-trans FT isomerase; WW domain binds specifically to phospho-Ser/Thr- FT Pro sequences; null viable; catalytic domain isomerizes FT phospho-Ser/Thr-Pro bonds; overexpression causes slow FT growth; overexpression causes G1 delay; putative positive FT regulator of Cdc25p; putative positive regulator of Wee1p; FT expression rescued the growth defect caused by ess1 FT deletion in S. cerevisiae; similar to S. cerevisiae ESS1" FT /fasta_file="fasta/c16C4.tab.seq.04977.out" FT misc_feature 664683..664775 FT /note="Match to PF00397 WW_rsp5_WWP, WW domain Score 45.65" FT misc_feature join(664857..665068,665214..665337) FT /note="Match to PF00639 Rotamase, PPIC-type PPIASE domain. FT Score 138.03" FT misc_feature 665069..665074 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 665198..665213 FT /colour=6 FT /note="ctaacactatgtgtag, splice branch and acceptor" FT CDS join(667171..667433,667479..667683,667737..668069) FT /colour=8 FT /gene="SPCC16C4.04" FT /label=SPCC16C4.04 FT /note="SPCC16C4.04, len:266" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c16C4.tab.seq.04978.out" FT misc_feature 667363..667389 FT /colour=8 FT /note="PS00037 Myb DNA-binding domain repeat signature 1" FT misc_feature 667434..667439 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 667466..667478 FT /colour=6 FT /note="ttaacgtgaccag, splice branch and acceptor" FT misc_feature 667684..667689 FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature 667725..667736 FT /colour=6 FT /note="ctaactgtttag, splice branch and acceptor" FT CDS join(668586..668656,668718..669063,669118..669306) FT /colour=7 FT /gene="SPCC16C4.05" FT /label=SPCC16C4.05 FT /note="SPCC16C4.05, len:201" FT /product="putative RNase P and RNase MRP subunit; similar FT to S. cerevisiae POP3" FT /fasta_file="fasta/c16C4.tab.seq.04979.out" FT misc_feature 668657..668662 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 668702..668717 FT /colour=6 FT /note="ctaaccataccgttag, splice branch and acceptor" FT misc_feature 669064..669069 FT /colour=6 FT /note="gtaagg, splice donor sequence" FT misc_feature 669103..669117 FT /colour=6 FT /note="ttgactatattttag, splice branch and acceptor" FT CDS complement(join(669467..669584,669637..670760)) FT /EC_number="4.2.1.70" FT /colour=7 FT /gene="SPCC16C4.06c" FT /label=SPCC16C4.06c FT /note="SPCC16C4.06c, len:338, SIMILARITY: FT Schizosaccharomyces pombe, CAB61835, pseudouridylate FT synthase lps1, SPCC126, (534 aa), fasta scores: opt: 463, FT E():2.2e-24, (29.4% identity in 445 aa)" FT /product="pseudouridylate synthase" FT /fasta_file="fasta/c16C4.tab.seq.04980.out" FT misc_feature complement(669585..669596) FT /colour=6 FT /note="ttaatgtctcag, splice branch and acceptor" FT misc_feature complement(669631..669636) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(669873..670580) FT /note="Match to PF01416 PseudoU_synth_1, tRNA FT pseudouridine synthase Score 96.19" FT misc_feature complement(670602..670625) FT /colour=8 FT /note="PS00030 Eukaryotic putative RNA-binding region RNP- FT 1 signature" FT misc_feature 671124..672160 FT /note="This fragment corresponds to the first 1057 bases FT of the previously described p54/1 gene & promoter FT constuct" FT misc_feature complement(671287..673475) FT /note="low complexity region" FT misc_feature 671310..671549 FT /note="previously predicted protein TR:Q09185, on the 54/1 FT promoter fragment, but this is 5' of the promoter there is FT no evidence that it is coding, as it has short length, FT very low coding potential and no homology" FT CDS 673476..675161 FT /colour=7 FT /gene="SPCC16C4.07" FT /label=SPCC16C4.07 FT /note="SPCC16C4.07, len:561, SIMILARITY:Saccharomyces FT cerevisiae, WHI3_YEAST, whi3 protein., (661 aa), fasta FT scores: opt: 431, E():1.3e-17, (32.5% identity in 406 aa)" FT /product="RNA-binding protein" FT /fasta_file="fasta/c16C4.tab.seq.04981.out" FT misc_feature 674757..674930 FT /note="Match to PF00076 rrm, RNA recognition motif. FT (a.k.a. RRM, RBD, or RNP domain) Score 40.46" FT misc_feature 675379 FT /note="true end of overlap with cosmid c5E4 S. pombe FT chromo some 3" FT CDS complement(join(675765..676068,676133..676290, FT 676360..676750,676854..677026)) FT /colour=2 FT /gene="skb15" FT /gene="SPCC16C4.08c" FT /label=skb15 FT /note="SPCC16C4.08c, len:341, SIMILARITY:Saccharomyces FT cere visiae, MK11_YEAST, mak11 protein., (468 aa), fasta FT scores: opt: 157, E():2.4e-09, (24.6% identity in 382 aa)" FT /product="Shk1 kinase binding protein 15; negative FT regulator of Shk1; WD repeat protein" FT /fasta_file="fasta/c16C4.tab.seq.04982.out" FT misc_feature complement(join(676042..676068,676133..676170)) FT /note="Match to PF00400 WD40, WD domain, G-beta repeat" FT misc_feature complement(676069..676081) FT /colour=6 FT /note="ctaatcaagttag, splice branch and acceptor" FT misc_feature complement(676127..676132) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(676291..676305) FT /colour=6 FT /note="ctaatacatttttag, splice branch and acceptor" FT misc_feature complement(676354..676359) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature complement(676477..676521) FT /colour=8 FT /note="PS00678 Trp-Asp (WD) repeats signature" FT misc_feature complement(676480..676590) FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 24.03" FT misc_feature complement(676609..676674) FT /note="Match to PF00400 WD40, WD domain, G-beta repeat" FT misc_feature complement(join(676741..676750,676854..676954)) FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 24.01" FT misc_feature complement(676751..676765) FT /colour=6 FT /note="ctaacatcgtttcag, splice branch and acceptor" FT misc_feature complement(676848..676853) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS 680362..683562 FT /colour=2 FT /gene="sts5" FT /gene="SPCC16C4.09" FT /label=sts5 FT /note="SPCC16C4.09, len:1066" FT /product="sts5p, target of the inhibitor staurosporine." FT /fasta_file="fasta/c16C4.tab.seq.04983.out" FT misc_feature 681076..681099 FT /colour=8 FT /note="PS00881 protein splicing signature" FT CDS join(685901..686085,686204..686792) FT /EC_number="3.1.1.31" FT /colour=7 FT /gene="SPCC16C4.10" FT /label=SPCC16C4.10 FT /note="SPCC16C4.10, len:257, SIMILARITY:Saccharomyces FT cerev isiae, SOL1_YEAST, sol1 protein., (321 aa), fasta FT scores: o pt: 668, E():0, (45.2% identity in 230 aa)" FT /product="sol1 family protein" FT /fasta_file="fasta/c16C4.tab.seq.04984.out" FT misc_feature 685982..686626 FT /colour=9 FT /note="Pfam match to entry PF01182 Glucosamine_iso, FT Glucosa mine-6-phosphate isomerase" FT misc_feature 686086..686091 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 686187..686203 FT /colour=6 FT /note="ttaacagctctatttag, splice branch and acceptor" FT CDS join(687754..687781,687833..688671) FT /colour=2 FT /gene="pef1" FT /gene="SPCC16C4.11" FT /label=pef1 FT /note="SPCC16C4.11, len:288, SIMILARITY:Emericella FT nidulans , G3643645, cyclin-dependent protein kinase FT phoa(m47)., (32 0 aa), fasta scores: opt: 1425, E():0, FT (72.2% identity in 2 84 aa)" FT /note="SPCC16C4.11, len:288, SIMILARITY:Emericella FT nidulans, O74930, cyclin-dependent protein kinase phoa., FT (366 aa), fasta scores: opt: 1425, E():0, (72.2% identity FT in 284 aa)" FT /product="Pho85/PhoA-like cyclin-dependent kinase; FT serine/threonine protein kinase" FT /fasta_file="fasta/c16C4.tab.seq.04985.out" FT misc_feature 687782..687787 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 687820..687832 FT /colour=6 FT /note="ttaacttaagtag, splice branch and acceptor" FT misc_feature 687829..687900 FT /colour=8 FT /note="PS00107 protein kinases ATP-binding region FT signature" FT misc_feature 687829..688659 FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain Score 319.29" FT misc_feature 688168..688206 FT /colour=8 FT /note="PS00108 Serine/Threonine protein kinases active- FT site signature" FT CDS join(689568..689645,689703..690167) FT /colour=7 FT /gene="SPCC16C4.12" FT /label=SPCC16C4.12 FT /note="SPCC16C4.12, len:180, SIMILARITY:Homo sapiens, FT Q9Y6D2, n-terminal acetyltransferase complex ard1 subunit., FT (178 aa), fasta scores: opt: 619, E():0, (58.1% identity FT in 167 aa)" FT /product="n-terminal acetyltransferase complex ard1 FT subunit" FT /fasta_file="fasta/c16C4.tab.seq.04986.out" FT misc_feature 689646..689651 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 689683..689702 FT /colour=6 FT /note="ttaactcgaacaacttttag, splice branch and acceptor" FT misc_feature 689703..690011 FT /note="Match to PF00583 Acetyltransf, Acetyltransferase FT (GNAT) family Score 25.43" FT CDS complement(691135..691632) FT /colour=2 FT /gene="rpl12-1" FT /gene="rpl12.1" FT /gene="SPCC16C4.13c" FT /label=rpl12-1 FT /note="SPCC16C4.13c, len:165, SIMILARITY:Prunus armeniaca, FT O50003, ribosomal protein l12, (166 aa), fasta scores: opt FT : 800, E():0, (71.3% identity in 164 aa)" FT /product="60S ribosomal protein L12.1/L12A" FT /fasta_file="fasta/c16C4.tab.seq.04987.out" FT misc_feature complement(691198..691245) FT /colour=8 FT /note="PS00359 Ribosomal protein L11 signature" FT misc_feature complement(691201..691596) FT /note="Pfam match to entry PF00298 L11, Ribosomal protein FT L 11" FT CDS complement(691825..694845) FT /colour=2 FT /gene="sfc4" FT /gene="SPCC16C4.14c" FT /label=sfc4 FT /note="SPCC16C4.14c, len:1006, SIMILARITY:Saccharomyces FT cerevisiae, TFC4_YEAST, transcription factor tau 131 kD FT subunit, (1025 aa), fasta scores: opt: 900, E():0, (28.5% FT identit y in 1067 aa)" FT /product="RNA polymerase III Transcription factor TFIIIC FT subunit; Brf-associated binding subunit; contains TPR FT domains" FT /fasta_file="fasta/c16C4.tab.seq.04988.out" FT misc_feature complement(691981..692067) FT /note="Pfam match to entry PF00515 TPR, TPR Domain" FT misc_feature complement(693355..693441) FT /note="Pfam match to entry PF00515 TPR, TPR Domain" FT misc_feature complement(693460..693546) FT /note="Pfam match to entry PF00515 TPR, TPR Domain" FT misc_feature complement(693565..693651) FT /note="Pfam match to entry PF00515 TPR, TPR Domain" FT CDS join(696054..696083,696157..697083) FT /colour=7 FT /gene="SPCC16C4.15" FT /label=SPCC16C4.15 FT /note="SPCC16C4.15, len:318, similarity: to yeast FT YEG0_YEAS T, 60S ribosomal protein, (393 aa), fasta scores, FT opt:1194, E():0, (57.6% identity in 311 aa overlap)" FT /product="mitochondrial ribosomal protein L2" FT /fasta_file="fasta/c16C4.tab.seq.04989.out" FT misc_feature 696084..696089 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 696142..696156 FT /colour=6 FT /note="ctaattcttatcaag, splice branch and acceptor" FT misc_feature 696274..697065 FT /note="Match to PF00181 Ribosomal_L2, Ribosomal proteins FT L2 Score 350.31" FT misc_feature 696892..696927 FT /colour=8 FT /note="PS00467 Ribosomal protein L2 signature" FT CDS complement(join(697862..698127,698180..698399)) FT /colour=8 FT /gene="SPCC16C4.16c" FT /label=SPCC16C4.16c FT /note="SPCC16C4.16c, len:161" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c16C4.tab.seq.04990.out" FT misc_feature complement(698128..698149) FT /colour=6 FT /note="ctaactctataaccgcgtatag, splice branch and acceptor" FT misc_feature complement(698174..698179) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT CDS 699038..699745 FT /colour=8 FT /gene="SPCC16C4.17" FT /label=SPCC16C4.17 FT /note="SPCC16C4.17, len:235" FT /product="hypothetical protein; sequence orphan; serine- FT rich protein" FT /fasta_file="fasta/c16C4.tab.seq.04991.out" FT CDS complement(join(700165..701391,701550..701681)) FT /colour=7 FT /gene="SPCC16C4.18c" FT /label=SPCC16C4.18c FT /note="SPCC16C4.18c, len:452, SIMILARITY:Drosophila FT melanogaster, T2D5_DROME, transcription initiation factor FT tfiid 62 kD subunit, (592 aa), fasta scores: opt: 858, FT E():0, (38.2% identity in 374 aa)" FT /product="putative transcription initiation factor TFIID FT subunit; TAF(II) complex (TBP-associated protein complex); FT putative SAGA complex ; possibly involved in chromatin FT architecture; transcriptional activator; similar to S. FT cerevisiae TAF60" FT /fasta_file="fasta/c16C4.tab.seq.04992.out" FT misc_feature complement(701392..701410) FT /colour=6 FT /note="ctaacagtatttgatttag, splice branch and acceptor" FT intron complement(701392..701549) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(701544..701549) FT /colour=6 FT /note="gtaggt, splice donor sequence" FT LTR 701782..702130 FT /note="Tf2-type LTR" FT LTR 702136..702501 FT /note="degraded tf1-type LTR" FT misc_feature 702468..702583 FT /note="nominal overlap with SPCC16C4 S. pombe chromosome 3" FT CDS 702607..704337 FT /colour=2 FT /gene="vps5" FT /gene="SPCPJ732.01" FT /label=vps5 FT /note="SPCPJ732.01, len:577, SIMILARITY:Arabidopsis FT thaliana, BAB10207, sorting nexin-like protein., (402 aa), FT fasta scores: opt: 352, E():7.1e-13, (24.1% identity in FT 394 aa)" FT /product="sorting nexin-like protein" FT /fasta_file="fasta/pJ732.tab.seq.04421.out" FT misc_feature 703213..703542 FT /note="Match to PF00787 PX, PX domain Score 91.60" FT CDS complement(join(704973..705176,705228..705722, FT 705808..706776)) FT /colour=7 FT /gene="SPCPJ732.02c" FT /label=SPCPJ732.02c FT /note="SPCPJ732.02c, len:556, SIMILARITY:Arabidopsis FT thaliana, BAA97229, xylulose kinase., (563 aa), fasta FT scores: opt: 1015, E():0, (37.7% identity in 567 aa)" FT /product="putative xylulose kinase; similar to S. FT cerevisiae XKS1" FT /fasta_file="fasta/pJ732.tab.seq.04422.out" FT misc_feature complement(705177..705192) FT /colour=6 FT /note="ctgaccatcaatttag, splice branch and acceptor" FT misc_feature complement(705222..705227) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(705723..705738) FT /colour=6 FT /note="ctaacatggactttag, splice branch and acceptor" FT misc_feature complement(705802..705807) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(706108..706407) FT /note="Match to PF00370 FGGY, FGGY family of carbohydrate FT kinases Score 20.85" FT intron 708265..708329 FT /colour=7 FT /note="Intron predicted by HMM_intron, Score=12.39" FT /score=1.239 FT misc_feature join(708340..708492,708542..708616,708675..708890) FT /fasta_file="fasta/pJ732.tab.seq.00006.out" FT /note="old prediction" FT CDS join(708340..708616,708675..708728,708769..708890) FT /colour=2 FT /gene="meu15" FT /gene="SPCPJ732.03" FT /label=meu15 FT /product="meiotic expression upregulated; no apparent FT orthologs" FT /fasta_file="fasta/pJ732.tab.seq.00010.out" FT misc_feature 708493..708498 FT /colour=6 FT /note="gtactg, splice donor sequence" FT misc_feature 708617..708622 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 708663..708674 FT /colour=6 FT /note="ctaatcgtctag, splice branch and acceptor" FT misc_feature complement(710708..711277) FT /note="Match to PF00005 ABC_tran, ABC transporter Score FT 92.59" FT misc_feature 712139..712237 FT /note="nominal overlap with SPCC18B5 S. pombe chromosome 3" FT misc_feature complement(712850..713449) FT /note="Match to PF00005 ABC_tran, ABC transporter" FT misc_feature complement(join(717851..718698,718698..718869)) FT /fasta_file="fasta/c18B5.tab.seq.00026.out" FT /note="SPCC18B5.02c, len:338, putative pseudogene, as FT frameshifted - cosmid sequence is accurate." FT CDS complement(join(717851..718698,718698..718869)) FT /colour=4 FT /gene="SPCC18B5.02c" FT /label=SPCC18B5.02c FT /note="SPCC18B5.02c, len:338, putative pseudogene, as FT frameshifted - cosmid sequence is accurate. FT SIMILARITY:Schizosaccharomyces pombe, CAA21909, putative FT cinnamoyl-coa reductase., (336 aa), fasta scores: opt: 690, FT E():0, (38.0% identity in 337 aa)" FT /product="cinnamoyl-coa reductase pseudogene" FT /pseudo FT /fasta_file="fasta/c18B5.tab.seq.05228.out" FT CDS 722234..724867 FT /colour=2 FT /gene="wee1" FT /gene="SPCC18B5.03" FT /label=wee1 FT /note="SPCC18B5.03, len:877" FT /product="serine/threonine protein kinase; dual FT specificity mitosis inhibitor protein kinase; CDK tyrosine FT kinase; negatively regulates G2/M transition; similar to FT S. cerevisiae SWE1" FT /fasta_file="fasta/c18B5.tab.seq.05229.out" FT misc_feature 723929..724741 FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain" FT CDS 726010..726510 FT /colour=7 FT /gene="SPCC18B5.04" FT /label=SPCC18B5.04 FT /note="SPCC18B5.04, len:166, SIMILARITY:Saccharomyces FT cerevisiae, YEO0_YEAST, hypothetical 23.4 kD protein in FT caj1-hom3 intergenic region., (202 aa), fasta scores: opt: FT 232, E():2.3e-09, (34.8% identity in 158 aa)" FT /product="mitochondrial ribosomal protein S18" FT /fasta_file="fasta/c18B5.tab.seq.05230.out" FT misc_feature 726340..726462 FT /note="Match to PF01084 Ribosomal_S18, Ribosomal protein FT S18" FT CDS complement(727030..728013) FT /colour=7 FT /gene="SPCC18B5.05c" FT /label=SPCC18B5.05c FT /note="SPCC18B5.05c, len:327, FT SIMILARITY:Schizosaccharomyces pombe, CAA21803, putative FT thiamine biosynthesis protein., (551 aa), fasta scores: FT opt: 598, E():2.3e-31, (35.2% identity in 264 aa)" FT /product="putative thiamine biosynthesis protein" FT /fasta_file="fasta/c18B5.tab.seq.05231.out" FT CDS join(729133..729212,729266..729319,729380..729678, FT 729735..729841,729890..730522) FT /colour=7 FT /gene="SPCC18B5.06" FT /label=SPCC18B5.06 FT /note="SPCC18B5.06, len:390, SIMILARITY:Drosophila FT melanogaster, PELO_DROME, pelota protein., (395 aa), fasta FT scores: opt: 1293, E():0, (49.9% identity in 383 aa)" FT /product="pelota protein/yeast dom34 homolog; putative FT involvement in meiotic and mitotic divisions" FT /fasta_file="fasta/c18B5.tab.seq.05232.out" FT misc_feature 729213..729218 FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature 729252..729265 FT /colour=6 FT /note="ctaacttagtttag, splice branch and acceptor" FT misc_feature 729320..729325 FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature 729353..729379 FT /colour=6 FT /note="ataacacctgttttttctgttgtttag, splice branch and FT acceptor" FT misc_feature 729679..729684 FT /colour=6 FT /note="gtaaat, splice donor sequence" FT misc_feature 729724..729734 FT /colour=6 FT /note="ctgacttgcag, splice branch and acceptor" FT misc_feature 729842..729847 FT /colour=6 FT /note="gtaaat, splice donor sequence" FT misc_feature 729874..729889 FT /colour=6 FT /note="ctgatcaattttttag, splice branch and acceptor" FT CDS complement(join(731472..733050,733103..733221)) FT /colour=7 FT /gene="SPCC18B5.07c" FT /label=SPCC18B5.07c FT /note="SPCC18B5.07c, len:565, SIMILARITY:Saccharomyces FT cerevisiae, Q06130, nuclear pore protein, (720 aa), fasta FT scores: opt: 259, E():9.5e-08, (26.4% identity in 568 aa)" FT /product="putative nucleoporin; nuclear pore protein; FT RanBp binding domain" FT /fasta_file="fasta/c18B5.tab.seq.05233.out" FT misc_feature complement(731517..731828) FT /note="Match to PF00638 Ran_BP1 domain" FT misc_feature complement(733051..733062) FT /colour=6 FT /note="ctaatgtattag, splice branch and acceptor" FT misc_feature complement(733097..733102) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS complement(733421..736342) FT /blast_file="blast/c18B5.tab.seq.00001.out" FT /colour=7 FT /gene="SPCC18B5.08c" FT /label=SPCC18B5.08c FT /note="SPCC18B5.08c, len:973, SIMILARITY:Staphylococcus FT aureus., SYI_STAAU, isoleucyl-tRNA synthetase, (917 aa), FT fasta scores: opt: 1670, E():0, (35.8% identity in 962 aa)" FT /product="isoleucyl-tRNA synthetase, mitochondrial" FT /fasta_file="fasta/c18B5.tab.seq.05234.out" FT misc_feature complement(734150..736135) FT /note="Match to PF00133 tRNA-synt_1, tRNA synthetases FT class I" FT CDS complement(737520..737870) FT /colour=9 FT /gene="SPCC18B5.09c" FT /label=SPCC18B5.09c FT /note="SPCC18B5.09c, len:116" FT /product="very hypothetical protein" FT /fasta_file="fasta/c18B5.tab.seq.05235.out" FT CDS complement(join(738016..738159,738226..738304, FT 738350..738594,738637..738705,738758..738849, FT 738893..739166,739229..739255)) FT /colour=7 FT /gene="SPCC18B5.10c" FT /label=SPCC18B5.10c FT /note="SPCC18B5.10c, len:309, SIMILARITY:Dictyostelium FT discoideum, AAC3_DICDI, aac-rich mRNA clone aac3 protein, FT (437 aa), fasta scores: opt: 557, E():2e-30, (31.0% FT identity in 326 aa)" FT /product="WD repeat protein" FT /fasta_file="fasta/c18B5.tab.seq.05236.out" FT misc_feature complement(738344..738349) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(738391..738504) FT /note="Match to PF00400 WD domain; G Beta repeat" FT misc_feature complement(738595..738608) FT /colour=6 FT /note="cttacgattaatag, splice branch and acceptor" FT misc_feature complement(738631..738636) FT /colour=6 FT /note="gtttgt, splice donor sequence" FT misc_feature complement(738706..738720) FT /colour=6 FT /note="ctaattgaatgctag, splice branch and acceptor" FT misc_feature complement(738752..738757) FT /colour=6 FT /note="gtacga, splice donor sequence" FT misc_feature complement(738850..738865) FT /colour=6 FT /note="ttaactatttattcag, splice branch and acceptor" FT misc_feature complement(738887..738892) FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature complement(739167..739191) FT /colour=6 FT /note="ctaaaactttcttttttctttttag, splice branch and FT acceptor" FT misc_feature complement(739223..739228) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS complement(join(739402..739681,739754..739962, FT 740001..740210,740276..740535,740604..740688, FT 740734..740765,740833..740881,740973..741230)) FT /colour=2 FT /gene="cds1" FT /gene="SPCC18B5.11c" FT /label=cds1 FT /note="SPCC18B5.11c, len:459" FT /product="checkpoint kinase; serine/threonine protein FT kinase; involved in unreplicated DNA checkpoint response; FT not essential in S. pombe; similar to S. cerevisiae RAD53" FT /fasta_file="fasta/c18B5.tab.seq.05237.out" FT misc_feature complement(join(739486..739681,739754..739962)) FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain" FT misc_feature complement(739682..739692) FT /colour=6 FT /note="ctaattcacag, splice branch and acceptor" FT intron complement(739682..739753) FT /colour=2 FT /note="confirmed" FT misc_feature complement(739748..739753) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(739963..739973) FT /colour=6 FT /note="ctaacttgtag, splice branch and acceptor" FT intron complement(739963..740000) FT /colour=2 FT /note="confirmed" FT misc_feature complement(739995..740000) FT /colour=6 FT /note="gtatat, splice donor sequence" FT misc_feature complement(join(740001..740210,740276..740461)) FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain" FT misc_feature complement(740211..740228) FT /colour=6 FT /note="ctaacacttatcttttag, splice branch and acceptor" FT intron complement(740211..740275) FT /colour=2 FT /note="confirmed" FT misc_feature complement(740270..740275) FT /colour=6 FT /note="gtgagt, splice donor sequence" FT misc_feature complement(740536..740550) FT /colour=6 FT /note="cttacagtcttatag, splice branch and acceptor" FT intron complement(740536..740603) FT /colour=2 FT /note="confirmed" FT misc_feature complement(740598..740603) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature complement(740629..740688) FT /note="Match to PF00498 FHA, Forkhead-associated (FHA) FT domain" FT misc_feature complement(740689..740702) FT /colour=6 FT /note="ctgacgtcatttag, splice branch and acceptor" FT intron complement(740689..740733) FT /colour=2 FT /note="confirmed" FT misc_feature complement(740728..740733) FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature complement(740766..740778) FT /colour=6 FT /note="ctaacaatttcag, splice branch and acceptor" FT intron complement(740766..740832) FT /colour=2 FT /note="confirmed" FT misc_feature complement(740827..740832) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(740882..740898) FT /colour=6 FT /note="ctaacgaaatgacccag, splice branch and acceptor" FT intron complement(740882..740972) FT /colour=2 FT /note="confirmed" FT misc_feature complement(740967..740972) FT /colour=6 FT /note="gtatat, splice donor sequence" FT misc_feature complement(740973..741053) FT /note="Match to PF00498 FHA, Forkhead-associated (FHA) FT domain" FT misc_feature 741681..744137 FT /note="nominal overlap with cosmid SPCC14G10, EM:AL031518 FT S. pombe chromosome 3" FT misc_feature join(741748..741781,741830..742344) FT /note="Match to PF01121 UPF0038, Uncharacterized protein FT family UPF0038" FT misc_feature 741782..741787 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 741816..741829 FT /colour=6 FT /note="ttaacctagttaag, splice branch and acceptor" FT misc_feature 743035..743040 FT /colour=6 FT /note="gtgagt, splice donor sequence" FT misc_feature 743063..743076 FT /colour=6 FT /note="ctaactccatgtag, splice branch and acceptor" FT misc_feature 741681..744137 FT /note="nominal overlap with cosmid S. pombe chromosome 3" FT misc_feature join(741748..741781,741830..742344) FT /note="Match to PF01121 UPF0038, Uncharacterized protein FT family UPF0038 Score 232.14" FT misc_feature 741782..741787 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 741816..741829 FT /colour=6 FT /note="ttaacctagttaag, splice branch and acceptor" FT misc_feature 741979..742068 FT /colour=8 FT /note="PS01294 Uncharacterized protein family UPF0038 FT signa ture" FT misc_feature 743035..743040 FT /colour=6 FT /note="gtgagt, splice donor sequence" FT misc_feature 743063..743076 FT /colour=6 FT /note="ctaactccatgtag, splice branch and acceptor" FT CDS complement(join(748037..748192,748297..748530)) FT /colour=7 FT /gene="SPCC14G10.03c" FT /label=SPCC14G10.03c FT /note="SPCC14G10.03c, len:129, SIMILARITY:Saccharomyces FT cer evisiae, YBR173C, YB23_YEAST, proteasome maturation FT factor, (148 aa), opt:240, E(): 1.9e-09, (36.8% identity FT in 125 aa overlap)" FT /product="putative proteasome maturation factor" FT /fasta_file="fasta/c14G10.tab.seq.04995.out" FT misc_feature complement(748193..748207) FT /colour=6 FT /note="ctgactcaagcatag, splice branch and acceptor" FT intron complement(748193..748296) FT /note="confirmed Intron: intron confirmed by EST" FT misc_feature complement(748291..748296) FT /colour=6 FT /note="gtaggt, splice donor sequence" FT CDS join(748812..748906,748990..749049,749160..749212, FT 749479..750764) FT /colour=8 FT /gene="SPCC14G10.04" FT /label=SPCC14G10.04 FT /note="SPCC14G10.04, len:497, SIMILARITY:Zea mays, Q41805, FT extensin-like protein , (1188 aa), fasta scores: o pt: 196, FT E():0.0027, (24.9% identity in 313 aa)" FT /product="hypothetical proline-rich protein; sequence FT orphan" FT /fasta_file="fasta/c14G10.tab.seq.04996.out" FT misc_feature 748907..748912 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 748976..748989 FT /colour=6 FT /note="ctaacgttttacag, splice branch and acceptor" FT misc_feature 749050..749055 FT /colour=6 FT /note="gtaggg, splice donor sequence" FT misc_feature 749141..749159 FT /colour=6 FT /note="ctaacaaatttttgtatag, splice branch and acceptor" FT misc_feature 749213..749218 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 749466..749478 FT /colour=6 FT /note="ctaacgtttgtag, splice branch and acceptor" FT misc_feature 751519..751603 FT /note="407 (+1) 1 85 dbj|AU007705|AU007705 FT Schizosaccharomy ces pombe cDNA, clone spc02407" FT misc_feature complement(752439..755680) FT /note="nominal overlap with cosmid SPCC1020, EM:AL023518 FT S. pombe chromosome 3" FT misc_feature 752681..752686 FT /colour=6 FT /note="gtaact, splice donor sequence" FT misc_feature 752714..752724 FT /colour=6 FT /note="ctaacgagcag, splice branch and acceptor" FT misc_feature 753290..753295 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 753335..753352 FT /colour=6 FT /note="ctaatgttgacaatatag, splice branch and acceptor" FT misc_feature 753760..753789 FT /colour=8 FT /note="PS00120 Lipases, serine active site" FT misc_feature 754094..754099 FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature 754123..754134 FT /colour=6 FT /note="ctaacaaattag, splice branch and acceptor" FT misc_feature 755406..755411 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 755451..755468 FT /colour=6 FT /note="ctgacaattcaattttag, splice branch and acceptor" FT misc_feature 752439..755680 FT /note="nominal overlap with cosmid SPCC14G10, EM:AL031518 FT S. pombe chromosome 3" FT misc_feature 752681..752686 FT /colour=6 FT /note="gtaact, splice donor sequence" FT misc_feature 752714..752724 FT /colour=6 FT /note="ctaacgagcag, splice branch and acceptor" FT misc_feature 753290..753295 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 753335..753352 FT /colour=6 FT /note="ctaatgttgacaatatag, splice branch and acceptor" FT misc_feature 753760..753789 FT /colour=8 FT /note="PS00120 Lipases, serine active site" FT misc_feature 754094..754099 FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature 754123..754134 FT /colour=6 FT /note="ctaacaaattag, splice branch and acceptor" FT misc_feature 755406..755411 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 755451..755468 FT /colour=6 FT /note="ctgacaattcaattttag, splice branch and acceptor" FT CDS 757494..757802 FT /colour=10 FT /gene="SPCC1020.11c" FT /label=SPCC1020.11c FT /note="SPCC1020.11c, len:102aa" FT /product="hypothetical protein; similar to S. cerevisiae FT YLL014W - by conserved residues; similar to Drosophila FT CG11781; contains 3 predicted transmembrane helices" FT /fasta_file="fasta/c1020.tab.seq.04612.out" FT CDS complement(758901..760853) FT /colour=7 FT /gene="SPCC1020.10" FT /label=SPCC1020.10 FT /note="SPCC1020.10, len:649, SIMILARITY:Saccharomyces FT cerevisiae, NPR1_YEAST, nitrogen permease reactivator FT protein, (790 aa), fasta scores: opt: 1200, E():0, (36.3% FT identity in 651 aa)" FT /product="putative serine/threonine protein kinase; FT similar to nitrogen permease reactivator protein" FT /fasta_file="fasta/c1020.tab.seq.04613.out" FT misc_feature complement(759012..759947) FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain Score 232.02" FT misc_feature complement(759555..759593) FT /colour=8 FT /note="PS00108 Serine/Threonine protein kinases active- FT site signature" FT misc_feature complement(759861..759932) FT /colour=8 FT /note="PS00107 protein kinases ATP-binding region FT signature" FT misc_feature complement(760853..766173) FT /note="low-complexity gene free region" FT CDS complement(766170..767369) FT /colour=10 FT /gene="SPCC1020.09" FT /label=SPCC1020.09 FT /note="SPCC1020.09, len:398, SIMILARITY:Mesocricetus FT auratus, Q60525, guanine nucleotide-binding protein beta FT 5., (538 aa), fasta scores: opt: 289, E():1.2e-11, (29.3% FT identity in 352 aa)" FT /product="WD repeat protein; no apparent S. cerevisiae FT ortholog" FT /fasta_file="fasta/c1020.tab.seq.00016.out" FT CDS complement(767986..770052) FT /colour=7 FT /gene="SPCC1020.08" FT /label=SPCC1020.08 FT /note="SPCC1020.08, len:687, SIMILARITY:Saccharomyces FT cerevisiae, YP07_YEAST, hypothetical 89.8 kD protein FT ypl207w., (810 aa), fasta scores: opt: 2165, E():0, (50.6% FT identity in 676 aa)" FT /product="protein similar to S. cerevisiae YPL207W; FT putative respiratory chain, has low similar to NADPH FT cytochrome p450 reductase" FT /fasta_file="fasta/c1020.tab.seq.04615.out" FT CDS complement(join(770722..771293,771351..771413, FT 771479..771521,771693..771725)) FT /colour=7 FT /gene="SPCC1020.07" FT /label=SPCC1020.07 FT /note="SPCC1020.07, len:235, FT SIMILARITY:Schizosaccharomyces pombe, YDX1_SCHPO, FT hypothetical 27.1 kD protein , (246 aa), fasta scores: FT opt: 734, E():0, (45.3% identity in 232 aa)" FT /product="haloacid dehalogenase-like hydrolase" FT /fasta_file="fasta/c1020.tab.seq.04616.out" FT misc_feature complement(770824..771333) FT /note="Match to PF00702 Hydrolase, haloacid dehalogenase- FT like hydrolase Score 63.32" FT misc_feature complement(771294..771312) FT /colour=6 FT /note="ctaatcattcatgctttag, splice branch and acceptor" FT misc_feature complement(771345..771350) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(771414..771429) FT /colour=6 FT /note="ctaacggtgcgtctag, splice branch and acceptor" FT misc_feature complement(771473..771478) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(771522..771534) FT /colour=6 FT /note="ctaacgaatacag, splice branch and acceptor" FT misc_feature complement(771687..771692) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT CDS 773498..774466 FT /EC_number="2.2.1.2" FT /colour=2 FT /gene="tal1" FT /gene="SPCC1020.06c" FT /label=tal1 FT /note="SPCC1020.06c, len:321" FT /product="transaldolase" FT /fasta_file="fasta/c1020.tab.seq.04617.out" FT misc_feature 773528..774235 FT /note="Match to PF00923 Transaldolase, Transaldolase Score FT 429.63" FT misc_feature 773588..773614 FT /colour=8 FT /note="PS01054 Transaldolase signature 1" FT misc_feature 773882..773935 FT /colour=8 FT /note="PS00958 Transaldolase active site" FT CDS complement(775041..776570) FT /colour=10 FT /gene="SPCC1020.05" FT /label=SPCC1020.05 FT /note="SPCC1020.05, len:508, SIMILARITY:Arabidopsis FT thaliana, AAC34232, f14m4.29 protein., (387 aa), fasta FT scores: opt: 257, E():4.1e-09, (29.9% identity in 344 aa)" FT /product="hypothetical protein; putative PTS HPR component FT of serine phosphorylation by similar to trembl:Q9M3Z3; FT Pfam-B_7731 domain" FT /fasta_file="fasta/c1020.tab.seq.04618.out" FT LTR complement(777734..778082) FT /colour=4 FT /note="Tf2 type" FT misc_feature complement(777734..782649) FT /note="Retrotransposable element TF2 type" FT CDS complement(778133..782134) FT /colour=9 FT /gene="tf2-5" FT /gene="SPCC1020.14" FT /label=tf2-5 FT /note="SPCC1020.14" FT /product="retrotransposable element; tf2-type transposon" FT /fasta_file="fasta/c1020.tab.seq.04619.out" FT misc_feature complement(780290..780829) FT /note="Match to PF00078 rvt, Reverse transcriptase (RNA- FT dependent DNA polymerase) Score 154.95" FT misc_feature complement(781298..781333) FT /colour=8 FT /note="PS00141 Eukaryotic and viral aspartyl proteases FT acti ve site" FT LTR complement(782301..782649) FT /colour=4 FT /note="Tf2 type" FT CDS join(783101..783375,783594..783747) FT /EC_number="2.7.7.6" FT /colour=2 FT /gene="rpb6" FT /gene="rpo15" FT /gene="SPCC1020.04c" FT /label=rpb6 FT /note="SPCC1020.04c, len:141" FT /product="DNA-directed RNA polymerases I, II, and III 15 FT kD subunit" FT /fasta_file="fasta/c1020.tab.seq.04620.out" FT misc_feature join(783317..783375,783594..783702) FT /note="Match to PF01192 RNA_pol_K, RNA polymerases K / 14 FT to 18 kDa subunit Score 117.29" FT misc_feature 783326..783370 FT /colour=8 FT /note="PS01111 RNA polymerases K / 14 to 18 Kd subunits FT sig nature" FT misc_feature 783376..783381 FT /colour=6 FT /note="gtgagt, splice donor sequence" FT intron 783376..783593 FT /colour=2 FT /note="confirmed intron" FT misc_feature 783577..783593 FT /colour=6 FT /note="ctaactctttattttag, splice branch and acceptor" FT CDS complement(join(784250..784788,784832..785244, FT 785464..785705)) FT /colour=7 FT /gene="SPCC1020.03" FT /label=SPCC1020.03 FT /note="SPCC1020.03, len:396, SIMILARITY:Saccharomyces FT cerevisiae, Q08970, chromosome xvi reading frame orf FT ypl224c., (449 aa), fasta scores: opt: 651, E():0, (33.9% FT identity in 372 aa)" FT /product="CDF metal cation transporter" FT /fasta_file="fasta/c1020.tab.seq.04621.out" FT misc_feature complement(784789..784804) FT /colour=6 FT /note="ctaatagtatatttag, splice branch and acceptor" FT misc_feature complement(784826..784831) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(785245..785260) FT /colour=6 FT /note="ttaacactttttatag, splice branch and acceptor" FT misc_feature complement(785458..785463) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(785493..785516) FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS complement(786520..790614) FT /colour=2 FT /gene="spc7" FT /gene="SPCC1020.02" FT /label=spc7 FT /note="SPCC1020.02, len:1363, SIMILARITY:Saccharomyces FT cerevisiae, YGJ3_YEAST, hypothetical 104.8 kD protein, FT (917 aa), fasta scores: opt: 355, E():2.1e-12, (21.0% FT identity in 922 aa)" FT /product="spindle pole body component" FT /fasta_file="fasta/c1020.tab.seq.04622.out" FT misc_feature 793872..794876 FT /note="Match to PF00122 E1-E2_ATPase, E1-E2 ATPase Score FT 387.52" FT misc_feature 794572..794898 FT /note="nominal overlap with cosmid SPCC1393, EM:AL035592 FT S. pombe chromosome 3" FT misc_feature complement(794572..794898) FT /note="nominal overlap with cosmid SPCC1020, EM:AL023518 FT S. pombe chromosome 3" FT misc_feature 794574..795656 FT /colour=9 FT /note="Pfam match to entry PF00122 E1-E2_ATPase, E1-E2 FT ATPases" FT CDS complement(796749..797969) FT /colour=8 FT /gene="SPCC1393.02c" FT /label=SPCC1393.02c FT /note="SPCC1393.02c, len:407, SIMILARITY:Saccharomyces FT cerevisiae, SPT2_YEAST, spt2 protein, (333 aa), fasta FT scores: opt: 204, E():0.0015, (29.0% identity in 231 aa)" FT /product="hypothetical protein; sequence orphan; putative FT coiled-coil regions" FT /fasta_file="fasta/c1393.tab.seq.05160.out" FT CDS 798282..798743 FT /colour=2 FT /gene="rps15-1" FT /gene="SPCC1393.03" FT /label=rps15-1 FT /note="SPCC1393.03, len:154" FT /product="40S ribosomal protein S15" FT /fasta_file="fasta/c1393.tab.seq.05161.out" FT misc_feature 798444..798689 FT /colour=9 FT /note="Pfam match to entry PF00203 Ribosomal_S19, FT Ribosomal protein S19" FT CDS join(799843..799984,800059..800618) FT /colour=8 FT /gene="SPCC1393.04" FT /label=SPCC1393.04 FT /note="SPCC1393.04, len:234" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1393.tab.seq.05162.out" FT misc_feature 799985..799990 FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature 800046..800058 FT /colour=6 FT /note="ttaaccaaaacag, splice branch and acceptor" FT CDS join(801197..801227,801264..801339,801379..801427, FT 801467..801516,801572..801986,802032..803311, FT 803362..803409,803447..803557,803600..803881, FT 803932..804018,804060..804501) FT /colour=8 FT /gene="SPCC1393.05" FT /label=SPCC1393.05 FT /note="SPCC1393.05, len:957" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1393.tab.seq.05163.out" FT misc_feature 801228..801233 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 801254..801263 FT /colour=6 FT /note="ctaatattag, splice branch and acceptor" FT misc_feature 801340..801345 FT /colour=6 FT /note="gtatgg, splice donor sequence" FT misc_feature 801367..801378 FT /colour=6 FT /note="ctgatgatatag, splice branch and acceptor" FT misc_feature 801428..801433 FT /colour=6 FT /note="gtattt, splice donor sequence" FT misc_feature 801455..801466 FT /colour=6 FT /note="ctaataattcag, splice branch and acceptor" FT misc_feature 801517..801522 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 801560..801571 FT /colour=6 FT /note="ttaacatgctag, splice branch and acceptor" FT misc_feature 801987..801992 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 802017..802031 FT /colour=6 FT /note="ctaacttttgactag, splice branch and acceptor" FT misc_feature 803312..803317 FT /colour=6 FT /note="gtctgt, splice donor sequence" FT misc_feature 803346..803361 FT /colour=6 FT /note="ctaacactttgtttag, splice branch and acceptor" FT misc_feature 803410..803415 FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature 803435..803446 FT /colour=6 FT /note="ttaatccaacag, splice branch and acceptor" FT misc_feature 803558..803563 FT /colour=6 FT /note="gtaggt, splice donor sequence" FT misc_feature 803583..803599 FT /colour=6 FT /note="ttaacctttttataaag, splice branch and acceptor" FT misc_feature 803882..803887 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 803915..803931 FT /colour=6 FT /note="ctaatcatgacttatag, splice branch and acceptor" FT misc_feature 804019..804024 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 804044..804059 FT /colour=6 FT /note="ctaatcagttgactag, splice branch and acceptor" FT CDS complement(join(804627..805627,805678..805800, FT 805907..806009)) FT /colour=10 FT /gene="SPCC1393.06c" FT /label=SPCC1393.06c FT /note="SPCC1393.06c, len:409, SIMILARITY:Saccharomyces FT cerevisiae, YHO5_YEAST, hypothetical 37.9 kD protein in FT ste12-nam8 intergenic region., (334 aa), fasta scores: FT opt: 298, E():4.3e-13, (30.0% identity in 290 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YHR085W" FT /fasta_file="fasta/c1393.tab.seq.05164.out" FT misc_feature complement(805628..805641) FT /colour=6 FT /note="ctaacatgttaaag, splice branch and acceptor" FT misc_feature complement(805672..805677) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature complement(805801..805817) FT /colour=6 FT /note="ctaacctaaacatctag, splice branch and acceptor" FT misc_feature complement(805901..805906) FT /colour=6 FT /note="gtggga, splice donor sequence" FT CDS complement(join(806262..807577,807634..808855)) FT /colour=8 FT /gene="SPCC1393.07c" FT /label=SPCC1393.07c FT /note="SPCC1393.07c, len:846" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1393.tab.seq.05165.out" FT misc_feature complement(807578..807596) FT /colour=6 FT /note="ctaacacttttcccgatag, splice branch and acceptor" FT misc_feature complement(807628..807633) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(808856..812654) FT /note="low complexity gene-free region" FT CDS 812655..814328 FT /colour=7 FT /gene="SPCC1393.08" FT /label=SPCC1393.08 FT /note="SPCC1393.08, len:557 SIMILARITY:Mus musculus, FT GAT5_MOUSE, transcription factor gata-5, (404 aa), fasta FT scores: opt: 469, E():8.6e-21, (28.7% identity in 348 aa)" FT /product="putative transcription factor; zinc finger FT protein; zf-GATA type" FT /fasta_file="fasta/c1393.tab.seq.05166.out" FT misc_feature 813735..813857 FT /colour=9 FT /note="Pfam match to entry PF00320 GATA, GATA zinc finger" FT misc_feature 813897..814016 FT /colour=9 FT /note="Pfam match to entry PF00320 GATA, GATA zinc finger" FT rRNA complement(814799..814896) FT /gene="SP25SRNAA" FT /product="S.pombe 25S rRNA gene" FT CDS complement(join(815442..815819,815970..816106, FT 816179..816247,816394..816457)) FT /colour=10 FT /gene="SPCC1393.09c" FT /label=SPCC1393.09c FT /note="SPCC1393.09c, len:215, SIMILARITY:Homo sapiens, FT Q9Y6B3, ptd013., (243 aa), fasta scores: opt: 346, FT E():4.7e-15, (33.7% identity in 208 aa)" FT /product="conserved protein" FT /fasta_file="fasta/c1393.tab.seq.05167.out" FT misc_feature complement(815820..815837) FT /colour=6 FT /note="ctaatcattcatatatag, splice branch and acceptor" FT misc_feature complement(815964..815969) FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature complement(816107..816127) FT /colour=6 FT /note="ctaacttatacgatcaattag, splice branch and acceptor" FT misc_feature complement(816173..816178) FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature complement(816248..816261) FT /colour=6 FT /note="ttaacattagttag, splice branch and acceptor" FT misc_feature complement(816388..816393) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT tRNA 817425..817498 FT /note="tRNA Ile anticodon AAT, Cove score 63.37" FT CDS 818459..819328 FT /colour=2 FT /gene="ctr4" FT /gene="SPCC1393.10" FT /label=ctr4 FT /note="SPCC1393.10, len:289" FT /product="high affinity copper transporter" FT /fasta_file="fasta/c1393.tab.seq.05168.out" FT tRNA complement(820567..820637) FT /note="tRNA Gly anticodon GCC" FT CDS 821644..822237 FT /colour=8 FT /gene="SPCC1393.11" FT /label=SPCC1393.11 FT /note="SPCC1393.11, len:198" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1393.tab.seq.05169.out" FT CDS 823679..824005 FT /colour=8 FT /gene="SPCC1393.12" FT /label=SPCC1393.12 FT /note="SPCC1393.12, len:108" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1393.tab.seq.05170.out" FT CDS join(825105..825135,825243..826540) FT /colour=10 FT /gene="SPCC1393.13" FT /label=SPCC1393.13 FT /note="SPCC1393.13, len:442, FT SIMILARITY:Schizosaccharomyces pombe, CAB55283, conserved FT hypothetical proteinSPAC806.04c, (429 aa), fasta scores: FT opt: 1771, E():0, (60.7% identity in 430 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YMR027W; similar to S. pombe SPAC806.04C" FT /fasta_file="fasta/c1393.tab.seq.05171.out" FT misc_feature 825136..825141 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 825229..825242 FT /colour=6 FT /note="ctaactttatacag, splice branch and acceptor" FT misc_feature 826756..827196 FT /note="nominal overlap with cosmid SPCC2H8, EM:AL049567 S. FT pombe chromosome 3" FT misc_feature 826756..827025 FT /note="Originally marked as SPCC2H8.01, but no homology FT evidence, and no MET" FT misc_feature 826756..827196 FT /note="nominal overlap with cosmid SPCC1393, EM:AL035592 FT S. pombe chromosome 3" FT CDS 828546..830297 FT /colour=7 FT /gene="SPCC2H8.02" FT /label=SPCC2H8.02 FT /note="SPCC2H8.02, len:583, SIMILARITY:Schizosaccharomyces FT pombe, O42885, inorganic phosphate transporter, (274 aa), FT fasta scores: opt: 1082, E():0, (61.8% identity in 267 aa)" FT /product="MFS inorganic phosphate transporter" FT /fasta_file="fasta/c2H8.tab.seq.05173.out" FT misc_feature 828663..830219 FT /colour=9 FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT other) transporter" FT CDS join(830489..830498,830560..830777) FT /colour=9 FT /gene="SPCC2H8.03" FT /label=SPCC2H8.03 FT /note="SPCC2H8.03, len:75" FT /product="very hypothetical protein" FT /fasta_file="fasta/c2H8.tab.seq.05174.out" FT misc_feature 830499..830504 FT /colour=6 FT /note="gtcagt, splice donor sequence" FT misc_feature 830528..830559 FT /colour=6 FT /note="ctaactcgacactgtacttattattattatag, splice branch and FT acceptor" FT CDS join(831178..831384,831449..832042) FT /colour=8 FT /gene="SPCC2H8.04" FT /label=SPCC2H8.04 FT /note="SPCC2H8.04, len:266" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c2H8.tab.seq.05175.out" FT misc_feature 831385..831390 FT /colour=6 FT /note="gtaagg, splice donor sequence" FT misc_feature 831437..831448 FT /colour=6 FT /note="ctgatgacttag, splice branch and acceptor" FT misc_feature 832361..832976 FT /note="nominal overlap with cosmid SPCC63, EM:AL049522 S. FT pombe chromosome 3" FT misc_feature complement(832361..832976) FT /note="nominal overlap with cosmid SPCC2H8, EM:AL049567 S. FT pombe chromosome 3" FT CDS complement(833966..835660) FT /EC_number="3.2.1.1" FT /colour=7 FT /gene="SPCC63.02c" FT /label=SPCC63.02c FT /note="SPCC63.02c, len:564, SIMILARITY:Schizosaccharomyces FT pombe, O74922, alpha-amylase., (625 aa), fasta scores: FT opt: 1578, E():0, (43.4% identity in 546 aa)" FT /product="putative alpha-amylase; no apparent S. FT cerevisiae ortholog" FT /fasta_file="fasta/c63.tab.seq.04818.out" FT misc_feature complement(834287..835570) FT /note="Match to PF00128 F00128 alpha-amylase, Alpha FT amylase" FT misc_feature complement(834329..835570) FT /note="Match to PF00128 alpha-amylase, Alpha amylase Score FT 284.05" FT CDS join(837605..837658,837720..838933,838984..839404, FT 839462..839701) FT /colour=10 FT /gene="SPCC63.03" FT /label=SPCC63.03 FT /note="SPCC63.03, len:642, SIMILARITY: C. elegans, P91243, FT SIMILARITY TO A DNAJ-LIKE DOMAIN, (591 aa), fasta FT file, opt:246, E():4e-08, (23.1% identity in 628 aa FT overlap)" FT /product="DNAJ domain protein; no apparent S. cerevisiae FT ortholog" FT /fasta_file="fasta/c63.tab.seq.04819.out" FT misc_feature join(837626..837658,837720..837890) FT /note="Match to PF00226 DnaJ, DnaJ domain" FT misc_feature 837659..837664 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 837697..837719 FT /colour=6 FT /note="ttaacatttcctttaaactctag, splice branch and acceptor" FT misc_feature 837720..837890 FT /note="Match to PF00226 DnaJ, DnaJ domain Score 73.96" FT misc_feature 838934..838939 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 838971..838983 FT /colour=6 FT /note="ctaatttttttag, splice branch and acceptor" FT misc_feature 839405..839410 FT /colour=6 FT /note="gtaaaa, splice donor sequence" FT misc_feature 839446..839461 FT /colour=6 FT /note="ctaactgttgatttag, splice branch and acceptor" FT CDS 839962..844071 FT /EC_number="2.4.1.183" FT /colour=2 FT /gene="mok14" FT /gene="SPCC63.04" FT /label=mok14 FT /note="SPCC63.04, len:1369" FT /product="alpha-glucan synthase; glycosyl transferase FT group 1; 13 predicted transmembrane helices; predicted N- FT terminal signal sequence" FT /fasta_file="fasta/c63.tab.seq.00032.out" FT CDS 844446..845417 FT /colour=7 FT /gene="SPCC63.05" FT /label=SPCC63.05 FT /note="SPCC63.05, len:323, SIMILARITY:Saccharomyces FT cerevisiae, TA42_YEAST, tap42 protein., (366 aa), fasta FT scores: opt: 329, E():3.3e-13, (27.0% identity in 322 aa)" FT /product="putative phosphatase component; similar to S. FT cerevisiae TAP42 " FT /fasta_file="fasta/c63.tab.seq.04821.out" FT CDS 845924..846919 FT /colour=10 FT /gene="SPCC63.06" FT /label=SPCC63.06 FT /note="SPCC63.06, len:331, SIMILARITY:Saccharomyces FT cerevisiae, YND5_YEAST, hypothetical 43.8 kD protein in FT nce3-hht2 intergenic region., (389 aa), fasta scores: opt: FT 398, E():2.6e-19, (29.2% identity in 342 aa)" FT /product="WD repeat protein" FT /fasta_file="fasta/c63.tab.seq.04822.out" FT misc_feature 846356..846442 FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 23.63" FT tRNA 847701..847782 FT /note="tRNA Ser anticodon AGA, Cove score 59.19" FT CDS join(848634..848869,848931..849231,849328..849432, FT 849486..849629) FT /colour=10 FT /gene="SPCC63.07" FT /label=SPCC63.07 FT /note="SPCC63.07, len:261, SIMILARITY:Saccharomyces FT cerevisiae, YG1G_YEAST, hypothetical 27.8 kD protein, (237 FT aa), fasta scores: opt: 775, E():0, (55.0% identity in 218 FT aa)" FT /product="conserved protein" FT /fasta_file="fasta/c63.tab.seq.04823.out" FT misc_feature 848870..848875 FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature 848912..848930 FT /colour=6 FT /note="ctaacctttctgcttgaag, splice branch and acceptor" FT misc_feature 849232..849237 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 849433..849438 FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature 849468..849485 FT /colour=6 FT /note="cttacttatttaatttag, splice branch and acceptor" FT CDS complement(join(850050..852440,852503..852604)) FT /colour=7 FT /gene="SPCC63.08c" FT /label=SPCC63.08c FT /note="SPCC63.08c, len:830, SIMILARITY:Saccharomyces FT cerevisiae, APG1_YEAST, autophagy serine/threonine-protein FT kinase apg1, (897 aa), fasta scores: opt: 1029, E():0, FT (32.6% identity in 894 aa)" FT /product="putative serine/threonine protein kinase; FT possibly involved in autophagy; similar to S. cerevisiae FT APG1" FT /fasta_file="fasta/c63.tab.seq.04824.out" FT misc_feature complement(join(851622..852440,852503..852565)) FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain" FT misc_feature complement(851655..852461) FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain Score 205.21" FT misc_feature complement(852441..852455) FT /colour=6 FT /note="ctaatcgtgttgcag, splice branch and acceptor" FT misc_feature complement(852497..852502) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS complement(join(854651..855695,855766..855800, FT 855839..855926,855984..856213)) FT /colour=7 FT /gene="SPCC63.10c" FT /label=SPCC63.10c FT /note="SPCC63.10c, len:465, SIMILARITY:Saccharomyces FT cerevisiae, SC59_YEAST, dolichol kinase, (519 aa), fasta FT scores: opt: 320, E():2.4e-14, (28.2% identity in 457 aa)" FT /product="putative dolichol kinase; similar to S. FT cervisiae SEC59" FT /fasta_file="fasta/c63.tab.seq.04825.out" FT misc_feature complement(854687..855163) FT /note="Match to PF00069 DUF56, Eukaryotic protein kinase FT domain Score 78.60" FT misc_feature complement(855760..855765) FT /colour=6 FT /note="gtaatt, splice donor sequence" FT misc_feature complement(855801..855811) FT /colour=6 FT /note="ttaacacaaag, splice branch and acceptor" FT misc_feature complement(855833..855838) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(855927..855942) FT /colour=6 FT /note="ctaactcattatttag, splice branch and acceptor" FT misc_feature complement(855978..855983) FT /colour=6 FT /note="gtacga, splice donor sequence" FT CDS 857153..859141 FT /colour=2 FT /gene="prp28" FT /gene="SPCC63.11" FT /label=prp28 FT /note="SPCC63.11, len:662, SIMILARITY:Homo sapiens, O43188, FT u5 snrnp 100 kD protein., (820 aa), fasta scores: opt: FT 1923, E():0, (47.4% identity in 671 aa)" FT /product="putative pre-mRNA splicing factor; U5 snrnp-like FT RNA helicase subunit; similar to S. cerevisiae PRP28" FT /fasta_file="fasta/c63.tab.seq.04826.out" FT misc_feature 857936..858628 FT /note="Match to PF00270 DEAD, DEAD/DEAH box helicase Score FT 217.24" FT misc_feature 857948..858685 FT /note="Match to PF00270, DEAD, DEAD/DEAH box helicase" FT misc_feature 858740..858985 FT /note="Match to PF00271 helicase_C, Helicases conserved C- FT terminal domain Score 116.96" FT CDS complement(859779..860393) FT /EC_number="3.4.25.1" FT /colour=7 FT /gene="SPCC63.12c" FT /label=SPCC63.12c FT /note="SPCC63.12c, len:204, SIMILARITY:Saccharomyces FT cerevisiae, PRCT_YEAST, proteasome component pup3, (205 FT aa), fasta scores: opt: 915, E():0, (68.3% identity in 199 FT aa)" FT /product="20S proteasome component (beta 3)" FT /fasta_file="fasta/c63.tab.seq.04827.out" FT misc_feature complement(859911..860366) FT /note="Match to PF00227 proteasome, Proteasome A-type and FT B-type, Score 127.35" FT CDS 861566..862192 FT /colour=10 FT /gene="SPCC63.13" FT /label=SPCC63.13 FT /note="SPCC63.13, len:208, SIMILARITY:Arabidopsis thaliana, FT O80684, putative heat shock protein., (286 aa), fasta FT scores: opt: 246, E():1.4e-08, (28.7% identity in 195 aa)" FT /product="DNAJ domain protein" FT /fasta_file="fasta/c63.tab.seq.04828.out" FT misc_feature 861575..861772 FT /note="Match to PF00226 DnaJ, DnaJ domain Score 80.85" FT misc_feature 861575..861778 FT /note="Match to PF00226, DnaJ, DnaJ domain" FT CDS 862712..866266 FT /colour=8 FT /gene="SPCC63.14" FT /label=SPCC63.14 FT /note="SPCC63.14, len:1184, SIMILARITY:Trypanosoma cruzi., FT Q26938, kinetoplast-associated protein, (1052 aa), fasta FT scores: opt: 214, E():0.00086, (20.2% identity in 969 aa)" FT /product="hypothetical protein; sequence orphan; predicted FT coiled-coil region" FT /fasta_file="fasta/c63.tab.seq.04829.out" FT misc_feature 867474..870279 FT /note="Overlap with SPCC16A11 S. pombe chromosome 3" FT conflict 867866..867875 FT /citation=[1] FT /note="this has 10 A's in chimeric cosmid c288" FT /note="An extra T was added to overlapping clone c16A11, FT so that sequences agree" FT misc_feature 869727..869732 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 869753..869763 FT /colour=6 FT /note="ctaataattag, splice branch and acceptor" FT misc_feature 870014..870130 FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 30.44" FT misc_feature 870149..870262 FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 26.44" FT misc_feature 867474..870279 FT /note="nomnial overlap with cosmid SPCC63 S. pombe FT chromosome 3" FT conflict 867866..867875 FT /citation=[1] FT /note="extra T added here, to match 10Ts in overlap with FT c63" FT misc_feature 869727..869732 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 869753..869763 FT /colour=6 FT /note="ctaataattag, splice branch and acceptor" FT misc_feature 869977..870093 FT /colour=9 FT /note="Pfam match to entry PF00400 WD40, WD domain, G-beta FT repeat," FT misc_feature 870103..870225 FT /colour=9 FT /note="Pfam match to entry PF00400 WD40, WD domain, G-beta FT repeat," FT misc_feature 870235..870351 FT /colour=9 FT /note="Pfam match to entry PF00400 WD40, WD domain, G-beta FT repeat," FT misc_feature 870760..870876 FT /colour=9 FT /note="Pfam match to entry PF00400 WD40, WD domain, G-beta FT repeat," FT misc_feature 870898..871029 FT /colour=9 FT /note="Pfam match to entry PF00400 WD40, WD domain, G-beta FT repeat," FT misc_feature 871063..871179 FT /colour=9 FT /note="Pfam match to entry PF00400 WD40, WD domain, G-beta FT repeat," FT misc_feature 871189..871305 FT /colour=9 FT /note="Pfam match to entry PF00400 WD40, WD domain, G-beta FT repeat," FT misc_feature 871315..871431 FT /colour=9 FT /note="Pfam match to entry PF00400 WD40, WD domain, G-beta FT repeat," FT misc_feature 871441..871557 FT /colour=9 FT /note="Pfam match to entry PF00400 WD40, WD domain, G-beta FT repeat," FT CDS complement(join(872348..873641,873950..874056)) FT /colour=12 FT /gene="SPCC16A11.03c" FT /label=SPCC16A11.03c FT /note="SPCC16A11.03c, len:466, FT SIMILARITY:Schizosaccharomyces pombe, YD48_SCHPO, FT hypothetical 56.5 kD protein c22h10.08 in chromosome i., FT (492 aa), fasta scores: opt: 1132, E():0, (43.5% identity FT in 407 aa)" FT /product="hypothetical protein; possibly S. pombe specific" FT /fasta_file="fasta/c16A11.tab.seq.05253.out" FT misc_feature complement(873642..873659) FT /colour=6 FT /note="ctaacaatgaaattatag, splice branch and acceptor" FT misc_feature complement(873944..873949) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS 874608..877640 FT /colour=7 FT /gene="SPCC16A11.04" FT /label=SPCC16A11.04 FT /note="SPCC16A11.04, len:1010, C-TERMINAL FT SIMILARITY:Saccharomyces cerevisiae, MDM1_YEAST, FT structural protein mdm1., (443 aa), fasta scores: opt: 356, FT E():2.1e-14, (27.4% identity in 423 aa)" FT /product="PX and PXA domain-associated with intracellular FT signalling pathways; RGS domain- regulator of G protein FT signalling; similar domain arrangement to human SNX13- FT sorting nexin; similar to S. cerevisiae MDM1" FT /fasta_file="fasta/c16A11.tab.seq.05254.out" FT misc_feature 876690..877040 FT /colour=9 FT /note="Pfam match to entry PF00787 PX, PX domain," FT CDS complement(join(877939..878154,878208..878318, FT 878402..878442,878524..878549,878600..878634)) FT /blast_file="blast/outfile.tab.seq.00001.out" FT /colour=2 FT /gene="dim1" FT /gene="SPCC16A11.05c" FT /label=dim1 FT /note="SPCC16A11.05c, len:142" FT /product="putative U4/U6.U5 snRNP; putative pre-mRNA FT splicing factor; similar to S. cerevisiae DIB1; essential; FT required for mitosis- possibly indirect" FT /fasta_file="fasta/c16A11.tab.seq.05255.out" FT misc_feature complement(878155..878174) FT /colour=6 FT /note="ctaaccttattaccatctag, splice branch and acceptor" FT misc_feature complement(878202..878207) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(878319..878337) FT /colour=6 FT /note="ctaacgcgtaacggaatag, splice branch and acceptor" FT misc_feature complement(878396..878401) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(878443..878465) FT /colour=6 FT /note="ttaacctttttttttataaatag, splice branch and acceptor" FT misc_feature complement(878518..878523) FT /colour=6 FT /note="gtacgc, splice donor sequence" FT misc_feature complement(878550..878566) FT /colour=6 FT /note="ctaacttatgtttatag, splice branch and acceptor" FT misc_feature complement(878594..878599) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS complement(879647..881167) FT /colour=7 FT /gene="SPCC16A11.06c" FT /label=SPCC16A11.06c FT /note="SPCC16A11.06c, len:506, SIMILARITY:Saccharomyces FT cerevisiae, YGO2_YEAST, hypothetical 72.6 kD protein in FT mrf1-sec27 intergenic region (616 aa), fasta scores: opt: FT 186, E():7.5e-06, (27.7% identity in 581 aa)" FT /product="possibly involved in glycosyl FT phosphatidylinositol (GPI) synthesis" FT /fasta_file="fasta/c16A11.tab.seq.05256.out" FT CDS 881166..881660 FT /colour=10 FT /gene="SPCC16A11.07" FT /label=SPCC16A11.07 FT /note="SPCC16A11.07, len:164. May use alteRNAtive FT initiation Met at codon 19" FT /product="hypothetical protein; similar to S. cerevisiae FT YOL008W" FT /fasta_file="fasta/c16A11.tab.seq.05257.out" FT CDS join(883392..883535,883594..883702,883822..885173) FT /colour=7 FT /gene="SPCC16A11.08" FT /label=SPCC16A11.08 FT /note="SPCC16A11.08, len:534, LOW SIMILARITY:Saccharomyces FT cerevisiae, Q04053, D9461.13p hypothetical protein (625 FT aa), fasta scores: opt: 297, E(): 1.6e-09, (22.5% identity FT in 534 aa)" FT /product="PX domain protein; similar to yeast YDL113C FT which interacts with a putative sorting nexin; low similar FT to sorting nexins" FT /fasta_file="fasta/c16A11.tab.seq.05258.out" FT misc_feature 883536..883541 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 883576..883593 FT /colour=6 FT /note="ctaatttttatactgtag, splice branch and acceptor" FT misc_feature join(883597..883702,883822..883967) FT /note="Match to PF00787 PX, PX domain Score 61.14" FT misc_feature 883703..883708 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS complement(886101..886733) FT /colour=7 FT /gene="SPCC16A11.09c" FT /label=SPCC16A11.09c FT /note="SPCC16A11.09c, len:210, SIMILARITY:Saccharomyces FT cerevisiae, IM23_YEAST, mitochondrial import inner FT membrane translocase subunit tim23(mitochondrial protein FT import protein 3), (222 aa), fasta scores: opt: 600, E():0, FT (43.7% identity in 222 aa)" FT /product="putative mitochondrial import inner membrane FT translocase subunit" FT /fasta_file="fasta/c16A11.tab.seq.05259.out" FT CDS complement(join(887406..887555,887642..887733, FT 888240..888387)) FT /colour=7 FT /gene="SPCC16A11.10c" FT /label=SPCC16A11.10c FT /note="SPCC16A11.10c, len:129, SIMILARITY:Gallus gallus, FT CYB5_CHICK, cytochrome b5., (138 aa), fasta scores: opt: FT 291, E():9.1e-14, (40.5% identity in 121 aa)" FT /product="putative cytochrome b5" FT /fasta_file="fasta/c16A11.tab.seq.05260.out" FT misc_feature complement(887556..887569) FT /colour=6 FT /note="ctaacatattttag, splice branch and acceptor" FT misc_feature complement(887636..887641) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(join(887648..887733,888240..888375)) FT /note="Match to PF00173 heme_1, Heme-binding domain in FT cytochrome b5 and oxidoreductases Score 101.53" FT misc_feature complement(887734..887747) FT /colour=6 FT /note="ttaacttgttttag, splice branch and acceptor" FT misc_feature complement(888234..888239) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS 888858..889205 FT /colour=7 FT /gene="SPCC16A11.11" FT /label=SPCC16A11.11 FT /note="SPCC16A11.11, len:115, SIMILARITY:Saccharomyces FT cerevisiae, RM31_YEAST, mitochondrial 60s ribosomal FT protein l31 , (131 aa), fasta scores: opt: 164, E():8.5e- FT 06, (39.0% identity in 136 aa)" FT /product="mitochondrial ribosomal protein l31" FT /fasta_file="fasta/c16A11.tab.seq.05261.out" FT CDS complement(join(889437..891666,891892..892211)) FT /EC_number="3.1.2.15" FT /colour=7 FT /gene="SPCC16A11.12c" FT /label=SPCC16A11.12c FT /note="SPCC16A11.12c, len:849, SIMILARITY:Mus musculus, FT UBP4_MOUSE, ubiquitin carboxyl-terminal hydrolase 4, (962 FT aa), fasta scores: opt: 793, E():0, (31.7% identity in 923 FT aa)" FT /product="ubiquitin carboxyl-terminal hydrolase" FT /fasta_file="fasta/c16A11.tab.seq.05262.out" FT misc_feature complement(889731..889844) FT /colour=9 FT /note="Pfam match to entry PF00443 UCH-2, Ubiquitin FT carboxyl-terminal hydrolases family 2," FT misc_feature complement(891321..891374) FT /colour=9 FT /note="Pfam match to entry PF00442 UCH-1, Ubiquitin FT carboxyl-terminal hydrolases family 2," FT misc_feature complement(891667..891681) FT /colour=6 FT /note="ctaactcaaatatag, splice branch and acceptor" FT misc_feature complement(891886..891891) FT /colour=6 FT /note="gtatga, splice donor sequence" FT CDS 892720..893514 FT /colour=2 FT /gene="luc7" FT /gene="SPCC16A11.13" FT /label=luc7 FT /note="SPCC16A11.13, len:264, LOW FT SIMILARITY:Caenorhabditis elegans., YP68_CAEEL, FT hypothetical 37.0 kD protein b0495.8 in chromosome ii., FT (313 aa), fasta scores: opt: 420, E():3.5e-19, (28.7% FT identity in 254 aa)" FT /product="U1 snRNA-associated protein; putative pre-mRNA FT splicing factor; possibly involved in exit from mitosis; FT predicted coiled-coil region; similar to S. cerevisiae FT LUC7" FT /fasta_file="fasta/c16A11.tab.seq.05263.out" FT CDS 894171..895427 FT /colour=7 FT /gene="SPCC16A11.14" FT /label=SPCC16A11.14 FT /note="SPCC16A11.14, len:418," FT /product="putative transcription factor; zing finger FT protein; zf-GATA type; putative swi/snf-related matrix FT associated protein; putative chromatin remodeling complex; FT similar to S. cerevisiae SFH1" FT /fasta_file="fasta/c16A11.tab.seq.05264.out" FT CDS complement(896182..896535) FT /colour=8 FT /gene="SPCC16A11.15c" FT /label=SPCC16A11.15c FT /note="SPCC16A11.15c, len:117," FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c16A11.tab.seq.05265.out" FT CDS complement(join(897682..898632,898743..898827, FT 899025..899155)) FT /colour=10 FT /gene="SPCC16A11.16c" FT /label=SPCC16A11.16c FT /note="SPCC16A11.16c, len:388, SIMILARITY:Homo sapiens, FT G100_HUMAN, 110 kD cell membrane glycoprotein., (407 aa), FT fasta scores: opt: 207, E():1e-06, (21.9% identity in 338 FT aa)" FT /product="putative membrane glycoprotein Pfam-b_16447; no FT apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c16A11.tab.seq.05266.out" FT misc_feature complement(898633..898648) FT /colour=6 FT /note="ctaacatataatgaag, splice branch and acceptor" FT misc_feature complement(898737..898742) FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature complement(898828..898842) FT /colour=6 FT /note="ctgacatttgtttag, splice branch and acceptor" FT misc_feature complement(899019..899024) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 901260..902039 FT /colour=9 FT /note="Pfam match to entry PF00493 MCM, MCM2/3/5 family," FT misc_feature 901914..902040 FT /note="nominal overlap with cosmid SPCC24B10, EM:AL157991 FT S. pombe chromosome 3" FT misc_feature 901914..902040 FT /note="Nominal overlap with SPCC16A11 S. pombe chromosome FT 3" FT misc_feature 901914..902834 FT /note="Pfam match to entry PF00493 MCM, MCM2/3/5 family, FT score 438.60, E-value 5.4e-128" FT intron 903111..903145 FT /note="Intron predicted by HMM_intron, Score=13.05" FT CDS complement(903550..904899) FT /note="SPCC24B10.02c, len:449, SIMILARITY:Saccharomyces FT cerevisiae, UTR1_YEAST, utr1 protein, (530 aa), fasta FT scores: opt: 546, E():2.2e-29, (34.8% identity in 422 aa)" FT /gene="SPCC24B10.02c" FT /product="yeast utr1 protein homolog; possibly associated FT with ferric reductase activity" FT /label=SPCC24B10.02c FT misc_feature complement(903703..904521) FT /note="Match to PF01513 DUF15, Domain of unknown function FT Score 198.39" FT CDS join(906321..906464,906652..906894) FT /note="SPCC24B10.03, len:128" FT /gene="SPCC24B10.03" FT /product="very hypothetical protein" FT /label=SPCC24B10.03 FT misc_feature 906465..906470 FT /note="gtatgg, splice donor sequence" FT misc_feature 906628..906651 FT /note="ctaacccatttattatttttgtag, splice branch and FT acceptor" FT CDS 907686..908285 FT /note="SPCC24B10.04, len:199" FT /gene="SPCC24B10.04" FT /product="hypothetical protein" FT /label=SPCC24B10.04 FT CDS join(908977..909054,909289..909465) FT /note="SPCC24B10.05, len:84, SIMILARITY:Saccharomyces FT cerevisiae, O74700, import protein tim9p., (87 aa), fasta FT scores: opt: 362, E():8.6e-20, (60.7% identity in 84 aa)" FT /note="may be additional small exon" FT /gene="SPCC24B10.05" FT /product="similar to yeast Tim9p essential component of FT the mitochondrial import machinery; required for transfer FT of hydrophobic inner membrane carrier proteins across the FT intermembrane space" FT /label=SPCC24B10.05 FT misc_feature 909055..909060 FT /note="gtatgt, splice donor sequence" FT misc_feature 909273..909288 FT /note="ttaacatgaattatag, splice branch and acceptor" FT intron 909462..909728 FT /note="Intron predicted by HMM_intron, Score=6.90" FT intron 909738..909951 FT /note="Intron predicted by HMM_intron, Score=6.29" FT CDS join(910510..910633,910848..910998,911064..911259) FT /note="SPCC24B10.06, len:156" FT /gene="SPCC24B10.06" FT /product="hypothetical protein" FT /label=SPCC24B10.06 FT misc_feature 910634..910639 FT /note="gtaagt, splice donor sequence" FT misc_feature 910830..910847 FT /note="ctaactcagtatatttag, splice branch and acceptor" FT misc_feature 910999..911004 FT /note="gtaagt, splice donor sequence" FT misc_feature 911048..911063 FT /note="ctaatattatttttag, splice branch and acceptor" FT CDS join(913117..913138,913210..914897) FT /note="SPCC24B10.07, len:569, SIMILARITY:Trichoderma FT reesei, Q99012, serine/threonine protein kinase., (662 aa), FT fasta scores: opt: 1704, E():0, (51.5% identity in 606 FT aa)" FT /gene="SPCC24B10.07" FT /product="putative proliferation-associated FT serine/threonine protein kinase" FT /label=SPCC24B10.07 FT misc_feature 913139..913144 FT /note="gtatgt, splice donor sequence" FT misc_feature 913188..913209 FT /note="ctaacagcttttcgctttttag, splice branch and acceptor" FT misc_feature 913875..914642 FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain Score 314.40" FT misc_feature 914646..914837 FT /note="Match to PF00433 pkinase_C, Protein kinase C FT terminal domain Score 93.66" FT CDS complement(915382..916695) FT /note="SPCC24B10.08c, len:437, SIMILARITY:Saccharomyces FT cerevisiae, ADA2_YEAST, potential transcriptional adaptor., FT (434 aa), fasta scores: opt: 1269, E():0, (43.8% FT identity in 436 aa)" FT /gene="SPCC24B10.08c" FT /product="potential transcriptional adaptor; similar to FT yeast ada2 component of two nucleosomal histone FT acetyltransferase complexes; contains Myb binding domain FT and zinc finger" FT /label=SPCC24B10.08c FT misc_feature complement(916369..916509) FT /note="Match to PF00249 myb_DNA-binding, Myb-like DNA- FT binding domain Score 35.56" FT misc_feature complement(916555..916686) FT /note="Match to PF00569 ZZ, Zinc finger present in FT dystrophin, CBP/p300 Score 48.92" FT CDS join(917864..917866,917931..918326) FT /note="SPCC24B10.09, len:132, FT SIMILARITY:Schizosaccharomyces pombe, RS17_SCHPO, 40s FT ribosomal protein s17., (131 aa), fasta scores: opt: 735, FT E():0, (87.9% identity in 132 aa)" FT /gene="rps17-2" FT /gene="SPCC24B10.09" FT /product="40s ribosomal protein s17" FT /label=rps17-2 FT misc_feature 917867..917872 FT /note="gtaagg, splice donor sequence" FT misc_feature 917917..917930 FT /note="ctgacaaaacatag, splice branch and acceptor" FT misc_feature 917931..918281 FT /note="Match to PF00833 Ribosomal_S17e, Ribosomal S17 FT Score 293.13" FT CDS complement(918772..919839) FT /note="SPCC24B10.10c, len:355, SIMILARITY:Saccharomyces FT cerevisiae, MSP1_YEAST, msp1 protein, (362 aa), fasta FT scores: opt: 940, E():0, (46.8% identity in 329 aa)" FT /gene="SPCC24B10.10c" FT /product="yeast msp1 protein homolog; putative intra- FT mitochondrial sorting protein, AAA family of ATPase" FT /label=SPCC24B10.10c FT misc_feature complement(918925..919461) FT /note="Match to PF00004 AAA, ATPases associated with FT various cellular activities (AAA) Score 239.50" FT CDS join(complement(921215..921221), FT complement(920943..921161),complement(920736..920886), FT complement(920455..920686)) FT /note="SPCC24B10.11c, len:210, SIMILARITY:Xenopus laevis, FT Q91864, tropomyosin., (248 aa), fasta scores: opt: 141, FT E():0.047, (25.9% identity in 170 aa)" FT /gene="SPCC24B10.11c" FT /product="hypothetical protein with coiled-coil region" FT /label=SPCC24B10.11c FT misc_feature complement(920687..920702) FT /note="ctgaccgggtttacag, splice branch and acceptor" FT misc_feature complement(920730..920735) FT /note="gtaagt, splice donor sequence" FT intron complement(920887..920942) FT /note="confirmed intron" FT misc_feature complement(920911..920926) FT /note="gtaactttaagtacag, splice branch and acceptor" FT misc_feature complement(920937..920942) FT /note="gtatgt, splice donor sequence" FT misc_feature complement(921162..921177) FT /note="ttaaccgatatgtcag, splice branch and acceptor" FT intron complement(921162..921214) FT /note="confirmed intron" FT misc_feature complement(921209..921214) FT /note="gtatgc, splice donor sequence" FT intron 921345..921391 FT /note="Intron predicted by HMM_intron, Score=8.57" FT CDS 921422..921946 FT /note="SPCC24B10.12, len:174, possibly spliced at N-term, FT SIMILARITY:Saccharomyces cerevisiae, YMD6_YEAST, FT hypothetical 20.7 kd protein in cat2-amd1 intergenic FT region., (181 aa), fasta scores: opt: 294, E():1.5e-12, FT (28.1% identity in 178 aa)" FT /gene="SPCC24B10.12" FT /product="hypothetical protein" FT /label=SPCC24B10.12 FT CDS 923069..923491 FT /note="SPCC24B10.13, len:140" FT /gene="skb5" FT /gene="SPCC24B10.13" FT /product="shk1 kinase-binding protein 5." FT /label=skb5 FT misc_feature 923321..923485 FT /note="Match to PF00018 SH3, SH3 domain Score 52.33" FT CDS join(complement(924781..924936), FT complement(924212..924667)) FT /note="SPCC24B10.14c, len:203" FT /gene="SPCC24B10.14c" FT /product="hypothetical protein" FT /label=SPCC24B10.14c FT misc_feature complement(924668..924682) FT /note="ttaacttttaaacag, splice branch and acceptor" FT misc_feature complement(924775..924780) FT /note="gtaaga, splice donor sequence" FT tRNA 925852..925924 FT /note="tRNA Arg anticodon ACG, Cove score 75.46" FT rRNA 926108..926294 FT /note="SPRG5SC Yeast (s.pombe) 5s rrna gene and flanks" FT misc_feature 926451..926615 FT /note="EST not associated with an orf" FT CDS 927999..929387 FT /note="SPCC24B10.15, len:462, SIMILARITY:Saccharomyces FT cerevisiae, Q12104, chromosome xv reading frame orf FT yor166c., (458 aa), fasta scores: opt: 221, E():2.4e-07, FT (25.8% identity in 411 aa)" FT /gene="SPCC24B10.15" FT /product="similar to yeast orf yor166c." FT /label=SPCC24B10.15 FT CDS complement(929755..930087) FT /note="SPCC24B10.16c, len:110" FT /gene="SPCC24B10.16c" FT /product="hypothetical protein" FT /label=SPCC24B10.16c FT CDS join(930591..930684,930751..930947,931078..931386) FT /note="SPCC24B10.17, len:199, SIMILARITY:Saccharomyces FT cerevisiae, EM24_YEAST, endosomal p24b protein precursor, FT (203 aa), fasta scores: opt: 495, E():1.4e-26, (39.0% FT identity in 205 aa)" FT /gene="SPCC24B10.17" FT /product="putative component of COPII-coated vesicles FT possibly involved in cargo sorting" FT /label=SPCC24B10.17 FT misc_feature join(930618..930684,930751..930947,931078..931383) FT /note="Match to PF01105 EMP24_GP25L, emp24/gp25L/p24 FT family Score 149.99" FT misc_feature 930685..930690 FT /note="gtatgt, splice donor sequence" FT intron 930685..930750 FT /note="confirmed intron" FT misc_feature 930733..930750 FT /note="ctaatgaagcaaacttag, splice branch and acceptor" FT misc_feature 930948..930953 FT /note="gtatgt, splice donor sequence" FT intron 930948..931077 FT /note="Intron confirmed by mRNA" FT misc_feature 931062..931077 FT /note="ctaacaacatcaatag, splice branch and acceptor" FT CDS join(932022..932112,932395..932450,932504..932638) FT /note="SPCC24B10.18, len:93, SIMILARITY:Oryza sativa, FT BAA90379, hypothetical protein., (86 aa), fasta scores: FT opt: 119, E():0.032, (36.6% identity in 82 aa)" FT /gene="SPCC24B10.18" FT /product="hypothetical protein." FT /label=SPCC24B10.18 FT misc_feature 932113..932118 FT /note="gtatgt, splice donor sequence" FT intron 932113..932394 FT /note="confirmed intron" FT misc_feature 932384..932394 FT /note="ttgacttttag, splice branch and acceptor" FT misc_feature 932451..932456 FT /note="gtatgt, splice donor sequence" FT intron 932451..932503 FT /note="confirmed intron" FT misc_feature 932489..932503 FT /note="ctaatatctttaaag, splice branch and acceptor" FT CDS join(complement(934401..934446), FT complement(932963..934284)) FT /note="SPCC24B10.19c, len:455, FT SIMILARITY:Schizosaccharomyces pombe, O94534, putative FT spindle pole body-associating protein., (809 aa), fasta FT scores: opt: 141, E():0.71, (24.5% identity in 245 aa)" FT /gene="SPCC24B10.19c" FT /product="hypothetical protein with possible coiled-coil FT region" FT /label=SPCC24B10.19c FT misc_feature complement(934285..934300) FT /note="ctaaccgttaatgcag, splice branch and acceptor" FT misc_feature complement(934395..934400) FT /note="gtataa, splice donor sequence" FT CDS 937803..938567 FT /note="SPCC24B10.20, len:254, SIMILARITY:Saccharomyces FT cerevisiae, YKH1_YEAST, hypothetical 28.0 kd protein in FT lhs1-nup100 intergenic region., (256 aa), fasta scores: FT opt: 626, E():0, (40.9% identity in 259 aa)" FT /gene="SPCC24B10.20" FT /product="hypothetical short chain dehydrogenase" FT /label=SPCC24B10.20 FT misc_feature 937830..938387 FT /note="Match to PF00106 adh_short, short chain FT dehydrogenase Score 91.40" FT CDS 939945..940694 FT /note="SPCC24B10.21, len:249" FT /gene="tpi1" FT /gene="tpi" FT /gene="SPCC24B10.21" FT /product="triosephosphate isomerase" FT /label=tpi1 FT misc_feature 939951..940688 FT /note="Match to PF00121 TIM, Triosephosphate isomerase FT Score 598.22" FT misc_feature 942546..942664 FT /note="595 (+1) 40633 40751 SPCC24B10 S. pombe chromosome FT 3" FT misc_feature 943399..944094 FT /note="Match to PF00476 DNA_pol_A, DNA polymerase family A FT Score 265.32" FT CDS complement(join(944872..945632,945671..945713, FT 945797..945859,946141..946260)) FT /colour=10 FT /gene="SPCPB16A4.02c" FT /label=SPCPB16A4.02c FT /product="hypothetical protein; contains 2 PH domains; FT same domain arrangement as human platelet p47 protein; no FT apparent S. cerevisiae ortholog" FT /fasta_file="fasta/pB16A4.tab.seq.05343.out" FT misc_feature complement(944905..945192) FT /note="Match to PF00169 PH, PH domain Score 50.22" FT tRNA 947262..947335 FT /note="tRNA Asn anticodon GTT, Cove score 86.64" FT CDS complement(947832..949589) FT /EC_number="3.5.4.10" FT /colour=2 FT /gene="ade10" FT /gene="SPCPB16A4.03c" FT /label=ade10 FT /product="5-phosphoribosyl-4-carboxaminde 5-aminoimidazole FT (AICAR) transformylase; inosinemonophosphate (IMP) FT cyclohydrolase (ATIC); FT phosphoribosylaminoimidazolecarboxamide formyltransferase; FT similar to S. cerevisiae ADE16 and ADE17" FT /fasta_file="fasta/pB16A4.tab.seq.05344.out" FT misc_feature complement(948228..949199) FT /note="Match to PF01808 AICARFT_IMPCHas, AICARFT/IMPCHase FT bienzyme Score 717.83" FT CDS complement(join(951193..951841,951975..952033, FT 952091..952204)) FT /colour=10 FT /gene="SPCPB16A4.04c" FT /label=SPCPB16A4.04c FT /product="putative methyltransferase" FT /fasta_file="fasta/pB16A4.tab.seq.05345.out" FT CDS complement(952676..953536) FT /colour=7 FT /gene="SPCPB16A4.05c" FT /label=SPCPB16A4.05c FT /product="putative urease accessory protein UREG; contains FT HypB/UreG nucleotide-binding domain; no apparent S. FT cerevisiae ortholog" FT /fasta_file="fasta/pB16A4.tab.seq.05346.out" FT misc_feature complement(952901..953293) FT /note="Match to PF01495 HypB_UreG, HypB/UreG nucleotide- FT binding domain Score 215.74" FT LTR 954537..954860 FT /note="721 (+1) 26 358 Tf1-type LTR" FT CDS complement(956424..956804) FT /colour=9 FT /gene="SPCPB16A4.06c" FT /label=SPCPB16A4.06c FT /product="very hypothetical protein" FT /fasta_file="fasta/pB16A4.tab.seq.05347.out" FT LTR complement(958713..958931) FT /note="293 (-1) 130 349 Tf2-type LTR" FT misc_feature complement(959536..959913) FT /note="Match to PF01456 Tryp_mucin, Mucin-like FT glycoprotein Score 31.05" FT misc_feature complement(959998..960405) FT /note="Match to PF01456 Tryp_mucin, Mucin-like FT glycoprotein Score 46.02" FT misc_feature complement(960517..960972) FT /note="Match to PF01456 Tryp_mucin, Mucin-like FT glycoprotein Score 24.13" FT misc_feature complement(961066..961500) FT /note="Match to PF01456 Tryp_mucin, Mucin-like FT glycoprotein Score 25.37" FT misc_feature 962633..962870 FT /note="3476 (+1) 1 706 SPCC1742 S. pombe chromosome 3; FT REPETATIVE REGION THIS MAY NOT BE THE TRUE OVERLAP" FT misc_feature 963335..963432 FT /note="nominal overlap with cosmid SPCC1795, EM:AL022598 FT S. pombe chromosome 3" FT conflict 963343 FT /citation=[1] FT /note="This base was a G in this cosmid but was changed to FT a G to agree with cosmid c1795 to allow contiguation" FT misc_feature 963343 FT /citation=[1] FT /note="This base was a G in this cosmid but was changed to FT a G to agree with cosmid c1795 to allow contiguation" FT misc_feature 963973..974761 FT /note="low complexity gene free region" FT CDS 972824..973162 FT /colour=9 FT /gene="SPCC1795.12c" FT /label=SPCC1795.12c FT /note="SPCC1795.12c, len:111" FT /product="very hypothetical protein" FT /fasta_file="fasta/c1795.tab.seq.04507.out" FT CDS complement(974761..976671) FT /colour=2 FT /gene="sum3" FT /gene="ded1" FT /gene="slh3" FT /gene="moc2" FT /gene="SPCC1795.11" FT /label=sum3 FT /note="SPCC1795.11, len:635" FT /product="DEAD/DEAH box helicase; ATP-dependent RNA FT helicase; positively involved in the initiation of protein FT synthesis; essential; suppressor of uncontrolled mitosis; FT subcellular localization of GFP fusion- Cytoplasm; FT interacts with Chk1; interacts with Cdc2" FT /fasta_file="fasta/c1795.tab.seq.04508.out" FT misc_feature complement(975097..975342) FT /note="Match to PF00271 helicase_C, Helicases conserved C- FT terminal domain Score 131.10" FT misc_feature complement(975451..976128) FT /note="Match to PF00270 DEAD, DEAD/DEAH box helicase Score FT 208.46" FT misc_feature complement(975646..975672) FT /colour=8 FT /note="PS00039 DEAD-box subfamily ATP-dependent helicases FT s ignature" FT misc_feature complement(976012..976035) FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS 977441..978124 FT /colour=10 FT /gene="SPCC1795.10c" FT /label=SPCC1795.10c FT /note="SPCC1795.10c, len:226, SIMILARITY:Saccharomyces FT cerevisiae, YHY1_YEAST, hypothetical 26.3 kD protein, (228 FT aa), fasta scores: opt: 521, E():7.9e-27, (44.0% identity FT in 175 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YHR181W; contains 4 predicted transmembrane helices; FT subcellular localization of GFP fusion- Cytoplasmic dots FT and nuclear-rim" FT /fasta_file="fasta/c1795.tab.seq.04509.out" FT CDS complement(978613..980178) FT /colour=7 FT /gene="SPCC1795.09" FT /label=SPCC1795.09 FT /note="SPCC1795.09, len:520, FT SIMILARITY:Schizosaccharomyces pombe, SXA1_SCHPO, aspartic FT proteinase sxa1 , (533 aa), fasta scores: opt: 407, FT E():1.3e-18, (27.8% identity in 508 aa)" FT /product="putative aspartic protease; predicted N-terminal FT signal sequence" FT /fasta_file="fasta/c1795.tab.seq.00018.out" FT misc_feature complement(978982..979254) FT /note="Match to PF00026 asp, Eukaryotic aspartyl protease FT Score 26.99" FT misc_feature complement(979369..979584) FT /note="Match to PF00026 asp, Eukaryotic aspartyl protease FT Score 36.21" FT CDS join(981120..981128,981211..981491,981576..984243) FT /colour=8 FT /gene="SPCC1795.08c" FT /label=SPCC1795.08c FT /note="SPCC1795.08c,len:985aa" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1795.tab.seq.04511.out" FT misc_feature 981129..981134 FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature 981190..981210 FT /colour=6 FT /note="ttaatatttttaattaaaaag, splice branch and acceptor" FT misc_feature 981492..981497 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 981560..981575 FT /colour=6 FT /note="ttaatctttcagctag, splice branch and acceptor" FT misc_feature complement(983575..983578) FT /note="true right hand end of c895 S. pombe chromosome 3" FT CDS complement(join(984466..984640,984711..984991)) FT /colour=7 FT /gene="SPCC1795.07" FT /label=SPCC1795.07 FT /note="SPCC1795.07, len:150, SIMILARITY:Saccharomyces FT cerevisiae, YNI1_YEAST, putative mitochondrial 40s FT ribosomal protein ynl081c., (143 aa), fasta scores: opt: FT 367, E():2.5e-20, (45.7% identity in 140 aa)" FT /product="mitochondrial ribosomal protein S13" FT /fasta_file="fasta/c1795.tab.seq.04512.out" FT misc_feature complement(join(984598..984640,984711..984985)) FT /note="Match to PF00416 Ribosomal_S13, Ribosomal protein FT S13 Score 122.74" FT misc_feature complement(984641..984656) FT /colour=6 FT /note="ctaatgaatatttcag, splice branch and acceptor" FT misc_feature complement(984705..984710) FT /colour=6 FT /note="gtatga, splice donor sequence" FT conflict complement(985872..985902) FT /citation=[1] FT /colour=6 FT /note="run of 32 A's in c1795, but 31 A's in c895" FT CDS complement(986079..986684) FT /colour=2 FT /gene="map2" FT /gene="SPCC1795.06" FT /label=map2 FT /note="SPCC1795.06, len:200" FT /product="p-factor; no apparent orthologs" FT /fasta_file="fasta/c1795.tab.seq.00017.out" FT CDS 988847..989422 FT /colour=7 FT /gene="SPCC1795.05c" FT /label=SPCC1795.05c FT /note="SPCC1795.05c, len:190, SIMILARITY:Saccharomyces FT cerevisiae, UMPK_YEAST, uridylate kinase, (204 aa), fasta FT scores: opt: 687, E():0, (52.9% identity in 189 aa)" FT /product="uridylate kinase" FT /fasta_file="fasta/c1795.tab.seq.04514.out" FT misc_feature 988865..989341 FT /note="Match to PF00406 adenylatekinase, Adenylate kinase FT Score 209.54" FT misc_feature 989105..989140 FT /colour=8 FT /note="PS00113 Adenylate kinase signature" FT misc_RNA complement(989942..990834) FT /colour=3 FT /note="SPKRNAG X04013 Fission yeast K RNA gene K1- and K2- FT R NA co-purified with RNase P activity (original entry FT contai ns several frame-shifts)" FT CDS join(990713..990715,990755..990852,990902..991384, FT 991451..991628) FT /EC_number="3.4.25.1" FT /colour=7 FT /gene="SPCC1795.04c" FT /label=SPCC1795.04c FT /note="SPCC1795.04c, proteasome component, len:253aa, FT simil ar eg. to A. castellanii, P90513, PROTEASOME FT COMPONENT C8,( 252aa), fasta scores, opt:892, E():0, FT (50.8% identity in 25 2 aa overlap), also similar eg. to FT YOR362C, PRC8_YEAST, P21 242, proteasome component c1, FT (287aa), fasta scores, opt:89 3, E():0, (54.0% identity in FT 252 aa overlap), Pfam match to entry proteasome PF00227, FT Proteasome A-type andB- type" FT /note="SPCC1795.04c, len:252, SIMILARITY:Saccharomyces FT cerevisiae, PRC8_YEAST, proteasome component c1, (287 aa), FT fasta scores: opt: 893, E():0, (54.0% identity in 252 aa)" FT /product="20S proteasome component (alpha 7); similar to FT S. cerevisiae PRE10" FT /fasta_file="fasta/c1795.tab.seq.04515.out" FT misc_feature 990716..990721 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 990744..990754 FT /colour=6 FT /note="ttaacaaacag, splice branch and acceptor" FT misc_feature 990853..990858 FT /colour=6 FT /note="gtaagg, splice donor sequence" FT intron 990853..990901 FT /colour=2 FT /note="confirmed intron" FT misc_feature 990886..990901 FT /colour=6 FT /note="ttaacattgtatttag, splice branch and acceptor" FT misc_feature 990903..991334 FT /note="Match to PF00227 proteasome, Proteasome A-type and FT B-type Score 165.13" FT misc_feature 991385..991390 FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature 991429..991450 FT /colour=6 FT /note="ctaataattcactcttttttag, splice branch and acceptor" FT CDS complement(join(993568..994533,994709..994804)) FT /colour=2 FT /gene="gms1" FT /gene="SPCC1795.03" FT /label=gms1 FT /note="SPCC1795.03, len:352" FT /product="UDP-galactose transporter; essential; required FT for protein galactosylation; no apparent S. cerevisiae FT ortholog" FT /fasta_file="fasta/c1795.tab.seq.04516.out" FT misc_feature complement(994534..994548) FT /colour=6 FT /note="ctaatggttaaatag, splice branch and acceptor" FT intron complement(994534..994708) FT /note="confirmed by est" FT misc_feature complement(994703..994708) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 995574..997898 FT /note="nominal overlap with cosmid SPCC895, EM:AL122011 S. FT pombe chromosome 3" FT misc_feature 995887..995892 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 995925..995942 FT /colour=6 FT /note="ttaacacgttgtgtacag, splice branch and acceptor" FT misc_feature 995574..997898 FT /note="nominal overlap with cosmid SPCC1795, EM:AL022598 FT S. pombe chromosome 3" FT misc_feature 995887..995892 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 995925..995942 FT /colour=6 FT /note="ttaacacgttgtgtacag, splice branch and acceptor" FT misc_feature 996341..996754 FT /colour=9 FT /note="Pfam match to entry PF01699 Na_Ca_Ex, FT Sodium/calcium exchanger protein, score 3.40, E-value FT 0.0043" FT CDS complement(998942..1000168) FT /colour=7 FT /gene="SPCC895.03c" FT /label=SPCC895.03c FT /note="SPCC895.03c, len:407, SIMILARITY:Saccharomyces FT cerevisiae, SUA5_YEAST, sua5 protein., (426 aa), fasta FT scores: opt: 1012, E():0, (51.3% identity in 419 aa)" FT /product="similar to S. cerevisiae translation initiation FT protein Sua5p" FT /fasta_file="fasta/c895.tab.seq.05081.out" FT misc_feature complement(999428..1000030) FT /note="Pfam match to entry PF01300 Sua5_yciO_yrdC, FT SUA5/yci O/yrdC family" FT CDS complement(join(1001020..1001624,1001713..1001947, FT 1002145..1002264)) FT /colour=2 FT /gene="ufe1" FT /gene="SPCC895.04c" FT /label=ufe1 FT /note="SPCC895.04c, len:319, SIMILARITY:Saccharomyces FT cerev isiae, UFE1_YEAST, ufe1 protein., (346 aa), fasta FT scores: o pt: 207, E():1.8e-05, (23.9% identity in 309 aa)" FT /product="putative ER syntaxin (t-SNARE)" FT /fasta_file="fasta/c895.tab.seq.05082.out" FT misc_feature complement(1001625..1001640) FT /colour=6 FT /note="ctaattgcatgagtag, splice branch and acceptor" FT misc_feature complement(1001707..1001712) FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature complement(1001948..1001960) FT /colour=6 FT /note="ctaacgttagcag, splice branch and acceptor" FT misc_feature complement(1002139..1002144) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS 1003130..1007515 FT /colour=2 FT /gene="for3" FT /gene="SPCC895.05" FT /label=for3 FT /note="SPCC895.05, len:1460, SIMILARITY:Saccharomyces FT cerevisiae, BNI1_YEAST, bni1 protein, (1953 aa), fasta FT scores: opt: 672, E():1e-20, (24.3% identity in 875 aa)" FT /product="formin-homology family; cell polarity protein; FT required for interphase actin cable formation; involved in FT actin reorganization" FT /fasta_file="fasta/c895.tab.seq.05083.out" FT CDS join(1008473..1008589,1008669..1010498,1010541..1010876) FT /colour=7 FT /gene="SPCC895.06" FT /label=SPCC895.06 FT /note="SPCC895.06, len:760, SIMILARITY:Saccharomyces FT cerevi siae, YG4C_YEAST, hypothetical 89.4 kD trp-asp FT repeats cont aining protein in pmt6-pct1intergenic region., FT (788 aa), fa sta scores: opt: 685, E():0, (35.0% FT identity in 792 aa)" FT /product="WD repeat protein" FT /fasta_file="fasta/c895.tab.seq.05084.out" FT misc_feature 1008590..1008595 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1008654..1008668 FT /colour=6 FT /note="ttaaccaataattag, splice branch and acceptor" FT misc_feature 1008672..1008803 FT /note="Pfam match to entry PF00400 G-beta, WD domain, G- FT bet a repeat" FT misc_feature 1009092..1009217 FT /note="Pfam match to entry PF00400 G-beta, WD domain, G- FT bet a repeat" FT misc_feature 1009323..1009439 FT /note="Pfam match to entry PF00400 G-beta, WD domain, G- FT bet a repeat" FT misc_feature 1009629..1009745 FT /note="Pfam match to entry PF00400 G-beta, WD domain, G- FT bet a repeat" FT misc_feature 1010253..1010369 FT /note="Pfam match to entry PF00400 G-beta, WD domain, G- FT bet a repeat" FT misc_feature 1010412..1010501 FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 20.67" FT misc_feature 1010499..1010504 FT /colour=6 FT /note="gtgagt, splice donor sequence" FT intron 1010499..1010540 FT /colour=2 FT /note="confirmed intron" FT misc_feature 1010529..1010540 FT /colour=6 FT /note="ctaactatttag, splice branch and acceptor" FT CDS 1011762..1014191 FT /colour=2 FT /gene="alp14" FT /gene="SPCC895.07" FT /label=alp14 FT /note="SPCC895.07, len:808" FT /product="spindle pole body-associating protein Alp14p" FT /fasta_file="fasta/c895.tab.seq.05085.out" FT CDS complement(1014648..1016120) FT /colour=8 FT /gene="SPCC895.08c" FT /label=SPCC895.08c FT /note="SPCC895.08c, len:490" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c895.tab.seq.05086.out" FT CDS complement(join(1017094..1018002,1018046..1020066, FT 1020108..1020708,1020768..1020956,1021028..1021291)) FT /colour=7 FT /gene="SPCC895.09c" FT /label=SPCC895.09c FT /note="SPCC895.09c, len:1327, SIMILARITY:Saccharomyces FT cere visiae, PR43_YEAST, pre-mRNA splicing factor RNA FT helicase p rp43, (767 aa), fasta scores: opt: 806, E():0, FT (31.2% ident ity in 788 aa)" FT /product="RNA helicase; similar to pre-mRNA splicing FT factors at the C terminus; UBA domain; similar to S. FT cerevisiae YLR419W (opt score)" FT /fasta_file="fasta/c895.tab.seq.05087.out" FT misc_feature complement(1018003..1018017) FT /colour=6 FT /note="ctaatataattttag, splice branch and acceptor" FT misc_feature complement(1018040..1018045) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1018340..1018639) FT /note="Pfam match to entry PF00271 helicase_C, Helicases FT co nserved C-terminal domain" FT misc_feature complement(1019300..1019323) FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature complement(1020067..1020080) FT /colour=6 FT /note="ctaactattaacag, splice branch and acceptor" FT misc_feature complement(1020102..1020107) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(1020709..1020722) FT /colour=6 FT /note="ttaatttctaacag, splice branch and acceptor" FT misc_feature complement(1020762..1020767) FT /colour=6 FT /note="gtaagg, splice donor sequence" FT misc_feature complement(1020957..1020974) FT /colour=6 FT /note="ctaaaatcttctaaacag, splice branch and acceptor" FT misc_feature complement(1021022..1021027) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1021502..1022026 FT /note="nominal overlap with cosmid SPCC825, EM:AL122011 S. FT pombe chromosome 3" FT misc_feature 1021502..1022026 FT /note="nominal overlap with cosmid SPCC895, EM:AL035247 S. FT pombe chromosome 3" FT CDS 1022681..1025149 FT /colour=7 FT /gene="SPCC825.01" FT /label=SPCC825.01 FT /note="SPCC825.01, len:822, SIMILARITY:Homo sapiens, FT CAB43392, hypothetical 72.4 kD protein., (634 aa), fasta FT scores: opt: 1573, E():0, (41.5% identity in 633 aa)" FT /product="ABC transporter of unknown specificity" FT /fasta_file="fasta/c825.tab.seq.05310.out" FT misc_feature 1023581..1024165 FT /note="Match to PF00005 ABC_tran, ABC transporter Score FT 102.84" FT misc_feature 1024544..1025035 FT /note="Match to PF00005 ABC_tran, ABC transporter Score FT 135.81" FT CDS join(1025552..1025651,1025701..1025784,1025841..1025879, FT 1025918..1026574,1026702..1026839,1026892..1027111, FT 1027156..1027438) FT /colour=7 FT /gene="SPCC825.02" FT /label=SPCC825.02 FT /note="SPCC825.02, len:506, SIMILARITY:Homo sapiens, FT G19P_HUMAN, protein kinase c substrate, 80 kD protein, FT heavy chain, (527 aa), fasta scores: opt: 481, E():1.3e-21, FT (30.5% identity in 502 aa)" FT /product="similar to human alpha glucosidase II beta FT subunit; putative protein kinase C substrate; possible EF FT hand by similarity; possible LDL receptor; predicted N- FT terminal signal sequence; no apparent S. cerevisiae FT ortholog" FT /fasta_file="fasta/c825.tab.seq.05311.out" FT misc_feature 1025652..1025657 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT intron 1025652..1025700 FT /colour=2 FT /note="confirmed intron" FT misc_feature 1025785..1025790 FT /colour=6 FT /note="gtagga, splice donor sequence" FT intron 1025785..1025840 FT /colour=2 FT /note="confirmed intron" FT misc_feature 1025827..1025840 FT /colour=6 FT /note="ctaacacattttag, splice branch and acceptor" FT misc_feature 1025880..1025885 FT /colour=6 FT /note="gtaata, splice donor sequence" FT intron 1025880..1025917 FT /colour=2 FT /note="confirmed intron" FT misc_feature 1025905..1025917 FT /colour=6 FT /note="ctaatccacttag, splice branch and acceptor" FT misc_feature 1026575..1026580 FT /colour=6 FT /note="gtatgg, splice donor sequence" FT intron 1026617..1026701 FT /note="intron confirmed from EST" FT misc_feature 1026685..1026701 FT /colour=6 FT /note="ctgactttgagaattag, splice branch and acceptor" FT misc_feature 1026840..1026845 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT intron 1026840..1026891 FT /note="Intron confirmed by est" FT misc_feature 1026879..1026891 FT /colour=6 FT /note="ctaattcattaag, splice branch and acceptor" FT misc_feature 1027112..1027117 FT /colour=6 FT /note="gtaggt, splice donor sequence" FT intron 1027112..1027155 FT /note="intron confirmed from EST" FT misc_feature 1027143..1027155 FT /colour=6 FT /note="ctaacaactctag, splice branch and acceptor" FT CDS complement(1028292..1029146) FT /colour=2 FT /gene="psy1" FT /gene="sso1" FT /gene="SPCC825.03c" FT /label=psy1 FT /note="SPCC825.03c, len:284, SIMILARITY:Saccharomyces FT cerevisiae, SSO2_YEAST, sso2 protein., (295 aa), fasta FT scores: opt: 549, E():7.7e-26, (34.1% identity in 258 aa)" FT /product="syntaxin plasma membrane (t-SNARE); essential; FT trancription enhanced during sporulation; interacts FT genetically with spo3" FT /fasta_file="fasta/c825.tab.seq.05312.out" FT misc_feature complement(1028337..1029149) FT /note="Match to PF00804 Syntaxin, Syntaxin Score 215.51" FT CDS complement(1030256..1030870) FT /colour=10 FT /gene="SPCC825.04c" FT /label=SPCC825.04c FT /note="SPCC825.04c, len:204, LOW SIMILARITY:Bacillus FT subtilis., PAIA_BACSU, protease synthase and sporulation FT negative regulatory protein pai 1., (171 aa), fasta FT scores: opt: 133, E():0.0053, (30.8% identity in 117 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YMR069W" FT /fasta_file="fasta/c825.tab.seq.05313.out" FT CDS complement(join(1031434..1031901,1031940..1032269, FT 1032329..1032418,1032472..1032489)) FT /colour=10 FT /gene="SPCC825.05c" FT /label=SPCC825.05c FT /note="SPCC825.05c, len:301, SIMILARITY:Plasmodium FT falciparum., O77355, mal3p4.20 protein., (558 aa), fasta FT scores: opt: 380, E():1.2e-16, (26.6% identity in 312 aa)" FT /product="PWI domain protein; no apparent S. cerevisiae FT ortholog" FT /fasta_file="fasta/c825.tab.seq.05314.out" FT misc_feature complement(1031902..1031915) FT /colour=6 FT /note="ctgacatttaacag, splice branch and acceptor" FT misc_feature complement(1031934..1031939) FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature complement(1032103..1032360) FT /colour=9 FT /note="Pfam match to entry PF01480 PWI, PWI domain," FT misc_feature complement(1032270..1032282) FT /colour=6 FT /note="ttaatttatttag, splice branch and acceptor" FT misc_feature complement(1032323..1032328) FT /colour=6 FT /note="gtacaa, splice donor sequence" FT misc_feature complement(1032419..1032431) FT /colour=6 FT /note="ctaacattaaaag, splice branch and acceptor" FT misc_feature complement(1032466..1032471) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1032753..1033188 FT /note="nominal overlap with cosmid SPCC1259, EM: AL034564 FT S. pombe chromosome 3" FT misc_feature complement(1032972..1033187) FT /note="Match to PF00416 Ribosomal_S13, Ribosomal protein FT S13 Score 140.98" FT misc_feature 1032753..1033190 FT /note="nominal overlap with cosmid SPCC825, EM:AL122011 S. FT pombe chromosome 3" FT misc_feature complement(1032972..1033358) FT /note="Match to PF00416 Ribosomal_S13, Ribosomal protein FT S13 Score 265.24" FT misc_feature complement(1033374..1033388) FT /colour=6 FT /note="ctaattcttaaatag, splice branch and acceptor" FT misc_feature complement(1033427..1033432) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS complement(1034412..1036880) FT /colour=7 FT /gene="SPCC1259.02c" FT /label=SPCC1259.02c FT /note="SPCC1259.02c, len:822, SIMILARITY:Caenorhabditis FT elegans., YP67_CAEEL, hypothetical 98.3 kD protein b0495.7 FT in chromosome ii., (863 aa), fasta scores: opt: 601, FT E():1.6e-31, (26.9% identity in 761 aa)" FT /product="conserved protein; contains 5 predicted FT transmembrane helices; Pfam_B-1571; contains M20 FT peptidase; predicted N-terminal signal sequence" FT /fasta_file="fasta/c1259.tab.seq.05124.out" FT CDS join(1040133..1040357,1040603..1040737) FT /EC_number="2.7.7.6" FT /colour=2 FT /gene="rpa12" FT /gene="SPCC1259.03" FT /label=rpa12 FT /note="SPCC1259.03, len:119, SIMILARITY:Saccharomyces FT cerevisiae, RPA9_YEAST, DNA-directed RNA polymerase i 13.7 FT kD polypeptide, (125 aa), fasta scores: opt: 477, E():9.3e- FT 26, (55.2% identity in 125 aa)" FT /product="DNA-directed RNA polymerase I subunit" FT /fasta_file="fasta/c1259.tab.seq.05125.out" FT misc_feature 1040358..1040363 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT intron 1040358..1040602 FT /note="confirmed by mRNA" FT misc_feature 1040586..1040602 FT /colour=6 FT /note="ctaacaaagttttgtag, splice branch and acceptor" FT misc_feature 1040612..1040725 FT /note="Match to PF01096 TFIIS, Transcription factor S-II FT (TFIIS) Score 53.17" FT CDS join(1041374..1041513,1041568..1041934) FT /colour=8 FT /gene="SPCC1259.04" FT /label=SPCC1259.04 FT /note="SPCC1259.04, len:168" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1259.tab.seq.05126.out" FT misc_feature 1041514..1041519 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1041552..1041567 FT /colour=6 FT /note="ttaacctcgttcgtag, splice branch and acceptor" FT CDS complement(join(1042639..1042780,1042843..1042877)) FT /EC_number="1.9.3.1" FT /colour=7 FT /gene="cox9" FT /gene="SPCC1259.05c" FT /label=cox9 FT /note="SPCC1259.05c, len:58, SIMILARITY:Saccharomyces FT cerevisiae, COX9_YEAST, cytochrome c oxidase polypeptide FT viia , (58 aa), fasta scores: opt: 180, E():3.2e-09, FT (41.1% identity in 56 aa)" FT /product="putative cytochrome c oxidase subunit VIIA" FT /fasta_file="fasta/c1259.tab.seq.05127.out" FT misc_feature complement(1042781..1042796) FT /colour=6 FT /note="ctgacgaatttattag, splice branch and acceptor" FT misc_feature complement(1042837..1042842) FT /colour=6 FT /note="gtaagg, splice donor sequence" FT CDS join(1043831..1043924,1043981..1044555) FT /colour=8 FT /gene="SPCC1259.06" FT /label=SPCC1259.06 FT /note="SPCC1259.06, len:222, SIMILARITY:Drosophila FT melanogaster, O18398, prodos protein., (328 aa), fasta FT scores: opt: 123, E():1.1, (27.5% identity in 182 aa)" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1259.tab.seq.05128.out" FT misc_feature 1043925..1043930 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1043965..1043980 FT /colour=6 FT /note="ctaatagcaataatag, splice branch and acceptor" FT CDS join(1045467..1045498,1045545..1046568) FT /colour=10 FT /gene="SPCC1259.07" FT /label=SPCC1259.07 FT /note="SPCC1259.07, len:351, SIMILARITY:Saccharomyces FT cerevisiae, Q07458, chromosome iv reading frame orf FT ydl076c., (294 aa), fasta scores: opt: 144, E():0.058, FT (25.5% identity in 255 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YDL076C" FT /fasta_file="fasta/c1259.tab.seq.05129.out" FT misc_feature 1045499..1045504 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1045534..1045544 FT /colour=6 FT /note="ctaacttgtag, splice branch and acceptor" FT CDS 1048603..1049787 FT /colour=8 FT /gene="SPCC1259.08" FT /label=SPCC1259.08 FT /note="SPCC1259.08, len:394, N-terminal may need FT truncating" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1259.tab.seq.05130.out" FT CDS complement(join(1050087..1050372,1050415..1050646, FT 1050695..1051324,1051391..1051435,1051477..1051581, FT 1051641..1051713)) FT /colour=7 FT /gene="SPCC1259.09c" FT /label=SPCC1259.09c FT /note="SPCC1259.09c, len:456, FT SIMILARITY:Schizosaccharomyce s pombe, P78909, fission FT yeast, (316 aa), fasta scores: opt : 1479, E():0, (84.5% FT identity in 290 aa)" FT /product="putative pyruvate dehydrogenase E2 subunit" FT /fasta_file="fasta/c1259.tab.seq.05131.out" FT misc_feature complement(1050373..1050384) FT /colour=6 FT /note="ttaaccgtacag, splice branch and acceptor" FT intron complement(1050373..1050414) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(1050409..1050414) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature complement(1050647..1050662) FT /colour=6 FT /note="ctaatatctttttcag, splice branch and acceptor" FT intron complement(1050647..1050694) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(1050689..1050694) FT /colour=6 FT /note="gtattg, splice donor sequence" FT misc_feature complement(join(1051221..1051324,1051391..1051435, FT 1051477..1051543)) FT /note="Match to PF00364 biotin_lipoyl, Biotin-requiring FT enzymes Score 44.95" FT misc_feature complement(1051325..1051339) FT /colour=6 FT /note="ctaacggtattttag, splice branch and acceptor" FT misc_feature complement(1051385..1051390) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(1051436..1051451) FT /colour=6 FT /note="ctaattctttacgtag, splice branch and acceptor" FT misc_feature complement(1051471..1051476) FT /colour=6 FT /note="gttggt, splice donor sequence" FT misc_feature complement(1051582..1051603) FT /colour=6 FT /note="ttaacagaataattttttgtag, splice branch and acceptor" FT misc_feature complement(1051635..1051640) FT /colour=6 FT /note="gtgagt, splice donor sequence" FT CDS join(1052318..1052481,1052520..1052829,1052885..1053649) FT /colour=7 FT /gene="SPCC1259.10" FT /label=SPCC1259.10 FT /note="SPCC1259.10, len:412, SIMILARITY:Saccharomyces FT cerevisiae, QRI7_YEAST, putative protease qri7, (407 aa), FT fasta scores: opt: 727, E():0, (38.5% identity in 408 aa)" FT /product="putative protease; endopeptidase" FT /fasta_file="fasta/c1259.tab.seq.05132.out" FT misc_feature 1052482..1052487 FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature 1052506..1052519 FT /colour=6 FT /note="ctaatttattatag, splice branch and acceptor" FT misc_feature join(1052509..1052833,1052889..1053544) FT /note="Match to PF00814 Peptidase_M22, Glycoprotease FT family Score 210.19" FT misc_feature 1052830..1052835 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1052867..1052884 FT /colour=6 FT /note="ttaatgaagagtttgtag, splice branch and acceptor" FT CDS complement(1053866..1056028) FT /colour=7 FT /gene="SPCC1259.11c" FT /label=SPCC1259.11c FT /note="SPCC1259.11c, len:720, SIMILARITY:Saccharomyces FT cerevisiae, MIC1_YEAST, Mic1 protein., (950 aa), fasta FT scores: opt: 1220, E():0, (33.7% identity in 606 aa)" FT /product="TBC domain protein; putative GTPase activating FT protein of Rab-like GTPase; similar to S. cerevisiae MIC1 " FT /fasta_file="fasta/c1259.tab.seq.05133.out" FT misc_feature complement(1054751..1055392) FT /colour=9 FT /note="Pfam match to entry PF00566 TBC, TBC domain" FT misc_feature complement(1054757..1055392) FT /note="Match to PF00566 TBC, TBC domain Score 178.59" FT CDS complement(join(1056495..1056590,1056685..1056737, FT 1056787..1057191,1057239..1057880,1057925..1058189)) FT /colour=7 FT /gene="SPCC1259.12c" FT /label=SPCC1259.12c FT /note="SPCC1259.12c, len:486, SIMILARITY:Homo sapiens, FT O94764, ranbpm., (500 aa), fasta scores: opt: 575, FT E():1.4e-29, (33.7% identity in 303 aa)" FT /product="similar to human ranbpm" FT /fasta_file="fasta/c1259.tab.seq.05134.out" FT misc_feature complement(1056591..1056601) FT /colour=6 FT /note="ctaaataaaag, splice branch and acceptor" FT misc_feature complement(1056679..1056684) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(1056738..1056749) FT /colour=6 FT /note="ctaatgatttag, splice branch and acceptor" FT misc_feature complement(1056781..1056786) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1057192..1057205) FT /colour=6 FT /note="ttgacacttattag, splice branch and acceptor" FT misc_feature complement(1057233..1057238) FT /colour=6 FT /note="gtatat, splice donor sequence" FT misc_feature complement(1057453..1057815) FT /note="Match to PF00622 SPRY, SPRY domain Score 106.55" FT misc_feature complement(1057494..1057859) FT /colour=9 FT /note="Pfam match to entry PF00622 SPRY, SPRY domain" FT misc_feature complement(1057881..1057894) FT /colour=6 FT /note="ctaatctttaatag, splice branch and acceptor" FT misc_feature complement(1057919..1057924) FT /colour=6 FT /note="gttcgt, splice donor sequence" FT CDS complement(join(1058890..1058971,1059022..1059257, FT 1059427..1059516,1059567..1059594,1059643..1059737)) FT /EC_number="6.3.2.19" FT /colour=2 FT /gene="ubc11" FT /gene="ubcdp" FT /gene="ubcp4" FT /gene="SPCC1259.15c" FT /note="SPCC1259.15c, len:176" FT /product="ubiquitin conjugating enzyme" FT /fasta_file="fasta/c1259.tab.seq.05135.out" FT misc_feature complement(join(1058929..1058971,1059022..1059257, FT 1059427..1059516)) FT /note="Match to PF00179 UQ_con, Ubiquitin-conjugating FT enzyme Score 153.14" FT CDS join(1060020..1060087,1060133..1060374,1060421..1060849, FT 1060888..1061095,1061142..1061331,1061377..1061673, FT 1061719..1061775) FT /colour=2 FT /gene="chk1" FT /gene="rad27" FT /gene="SPCC1259.13" FT /label=chk1 FT /note="SPCC1259.13, len:496" FT /product="serine/threonine protein kinase; DNA damage FT checkpoint protein; similar to S. cerevisiae CHK1" FT /fasta_file="fasta/c1259.tab.seq.05136.out" FT misc_feature 1060047..1060835 FT /colour=9 FT /note="Pfam match to entry PF00069 pkinase, Eukaryotic FT prot ein kinase domain" FT misc_feature 1060088..1060093 FT /colour=6 FT /note="gtatga, splice donor sequence" FT intron 1060088..1060132 FT /note="confirmed by mRNA" FT misc_feature 1060119..1060132 FT /colour=6 FT /note="ctaacttaagcaag, splice branch and acceptor" FT misc_feature join(1060128..1060374,1060421..1060849,1060888..1060964) FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain Score 263.39" FT misc_feature 1060375..1060380 FT /colour=6 FT /note="gtgggt, splice donor sequence" FT intron 1060375..1060420 FT /note="confirmed by mRNA" FT misc_feature 1060401..1060420 FT /colour=6 FT /note="ctaacggacttacaatttag, splice branch and acceptor" FT misc_feature 1060850..1060855 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT intron 1060850..1060887 FT /note="confirmed by mRNA" FT misc_feature 1060877..1060887 FT /colour=6 FT /note="ctaatgatcag, splice branch and acceptor" FT misc_feature 1061096..1061101 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT intron 1061096..1061141 FT /note="confirmed by mRNA" FT misc_feature 1061125..1061141 FT /colour=6 FT /note="ctaactctttcaattag, splice branch and acceptor" FT misc_feature 1061332..1061337 FT /colour=6 FT /note="gtatta, splice donor sequence" FT intron 1061332..1061376 FT /note="confirmed by mRNA" FT misc_feature 1061360..1061376 FT /colour=6 FT /note="ctaactatatgaaaaag, splice branch and acceptor" FT misc_feature 1061674..1061679 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT intron 1061674..1061718 FT /note="confirmed by mRNA" FT misc_feature 1061703..1061718 FT /colour=6 FT /note="ctaatccatgtgaaag, splice branch and acceptor" FT CDS complement(1061985..1064195) FT /colour=2 FT /gene="meu27" FT /gene="B8647-6" FT /gene="SPCC1259.14c" FT /label=B8647-6 FT /note="SPCC1259.14c, len:736, FT SIMILARITY:Schizosaccharomyces pombe, O13699, hypothetical FT 50.4 kD protein c11g7.06c in chromosome i., (430 aa), FT fasta scores: opt: 316, E():6.5e-13, (28.8% identity in FT 243 aa)" FT /product="Pfam-B_8647 domain; possibly S. pombe specific; FT NLS; meotic expression upregulated" FT /fasta_file="fasta/c1259.tab.seq.05137.out" FT tRNA complement(1065044..1065117) FT /note="tRNA Ala anticodon AGC, Cove score 56.39" FT tRNA complement(1065778..1065860) FT /note="tRNA Pseudo anticodon AAC, Cove score 40.82" FT tRNA complement(1065814..1065822) FT /note="intron tRNA Val anticodon AAC" FT tRNA 1066628..1066709 FT /note="tRNA Ser anticodon AGA, Cove score 59.19" FT tRNA complement(1067092..1067164) FT /note="tRNA Arg anticodon TCG, Cove score 59.66" FT tRNA 1068029..1068099 FT /note="tRNA Asp anticodon GTC, Cove score 57.96" FT tRNA complement(1068182..1068254) FT /note="tRNA Arg anticodon ACG, Cove score 54.83" FT tRNA 1069166..1069244 FT /note="tRNA Leu anticodon AAG, Cove score 46.56" FT CDS complement(959281..963972) FT /colour=8 FT /gene="SPCPB16A4.07c" FT /gene="SPCC1742.01" FT /gene="SPCC1795.13" FT /label=SPCPB16A4.07c FT /product="hypothetical protein; sequence orphan; large FT repeated threonine-rich region; contains 4 Tryp_mucin, FT Mucin-like glycoprotein repeat; predicted N-terminal FT signal sequence" FT /fasta_file="fasta/pB16A4.tab.seq.05348.out" FT /label=SPCC1742.01 FT /note="SPCC1742.01," FT /fasta_file="fasta/c1742.tab.seq.05381.out" FT /label=SPCC1795.13 FT /note="SPCC1795.13" FT /fasta_file="fasta/c1795.tab.seq.04506.out" FT CDS 941416..944472 FT /note="SPCC24B10.22, " FT /gene="mip1" FT /gene="SPCC24B10.22" FT /product="dna polymerase gamma" FT /label=mip1 FT /EC_number="2.7.7.7" FT /colour=2 FT /gene="SPCPB16A4.01" FT /product="DNA polymerase gamma; mitochondrial" FT /fasta_file="fasta/pB16A4.tab.seq.05342.out" FT CDS join(869701..869726,869764..872071) FT /colour=10 FT /gene="SPCC63.16" FT /gene="SPCC16A11.02" FT /label=SPCC63.16 FT /note="SPCC63.16, len:>180, SIMILARITY:Saccharomyces FT cerevisiae, Q05946, similar to several proteins of the FT beta-transducin family., (817 aa), fasta scores: opt: 371, FT E():1.1e-17, (40.5% identity in 168 aa)" FT /product="WD repeat protein; similar to human SAZD" FT /fasta_file="fasta/c63.tab.seq.04831.out" FT /label=SPCC16A11.02 FT /note="SPCC16A11.02, len:777, SIMILARITY:Homo sapiens, FT SAZD_HUMAN, wd-repeat protein sazd., (519 aa), fasta FT scores: opt: 917, E():0, (34.9% identity in 519 aa)" FT /fasta_file="fasta/c16A11.tab.seq.05252.out" FT CDS join(755257..755405,755469..756186) FT /colour=10 FT /gene="SPCC14G10.06" FT /gene="SPCC1020.12c" FT /label=SPCC14G10.06 FT /note="SPCC14G10.06, len:119 SIMILARITY: to Homo Sapiens FT HX C-26, G1842163 HXC-26, (325 aa), opt:133, E(): 1.6e- FT 08, ( 35.4% identity in 130 aa overlap" FT /product="xap-5-like protein; Pfam-B_11986; no apparent S. FT cerevisiae ortholog" FT /fasta_file="fasta/c14G10.tab.seq.04998.out" FT /label=SPCC1020.12c FT /note="SPCC1020.12c, len:287, SIMILARITY:Homo sapiens, FT CAB46272, xap-5-like protein., (325 aa), fasta scores: FT opt: 483, E():1.8e-23, (31.6% identity in 275 aa)" FT /fasta_file="fasta/c1020.tab.seq.04611.out" FT CDS complement(709415..714007) FT /colour=2 FT /gene="bfr1" FT /gene="hba2" FT /gene="SPCPJ732.04c" FT /gene="SPCC18B5.01c" FT /label=bfr1 FT /note="SPCPJ732.04c," FT /product="MFS brefeldin A efflux transporter" FT /fasta_file="fasta/pJ732.tab.seq.04424.out" FT /note="SPCC18B5.01c, len:>622" FT /fasta_file="fasta/c18B5.tab.seq.05227.out" FT CDS 657704..658258 FT /colour=7 FT /gene="SPCC5E4.08" FT /label=SPCC5E4.08 FT /note="SPCC5E4.08, len:184" FT /product="putative RNA-binding protein; RNase MRP; low FT similar to S. cerevisiae SNM1; predicted N-terminal signal FT sequence" FT /fasta_file="fasta/c5E4.tab.seq.05018.out" FT /gene="SPCC16C4.19" FT /label=SPCC16C4.19 FT /note="SPCC16C4.19, len:>140, SIMILARITY:Saccharomyces FT cerevisiae, RMRP_YEAST, RNAse mrp protein component snm1., FT (198 aa), fasta scores: opt: 142, E():0.0035, (26.0% FT identity in 146 aa)" FT /fasta_file="fasta/c16C4.tab.seq.04973.out" FT CDS join(658832..659139,659223..659488,659567..659628, FT 659709..660413) FT /colour=10 FT /gene="SPCC16C4.01" FT /gene="SPCC5E4.09" FT /label=SPCC16C4.01 FT /note="SPCC5E4.09, len:191; entirely contained in c16C4, FT SIMILARITY:Saccharomyces cerevisiae, Q03441, YDL001W, FT hypothetical 49.9 kD protein., (430 aa), fasta scores: FT opt: 340, E():1.9e-16, (40.7% identity in 189 aa)" FT /product="conserved protein; similar to S. cerevisiae FT YDL001W" FT /fasta_file="fasta/c5E4.tab.seq.05019.out" FT /note="SPCC16C4.01, len:446, SIMILARITY:Saccharomyces FT cerev isiae, Q03441, hypothetical 49.9 kD protein., (430 FT aa), fas ta scores: opt: 995, E():0, (54.8% identity in FT 376 aa)" FT /fasta_file="fasta/c16C4.tab.seq.04974.out" FT CDS 620024..623059 FT /colour=10 FT /gene="SPCC1183.11" FT /gene="SPCC31H12.01" FT /label=SPCC1183.11 FT /note="SPCC1183.11, len:1011, FT SIMILARITY:Schizosaccharomyce s pombe, O14050, FT serine/threonine protein kinase., (840 aa) , fasta scores: FT opt: 667, E():0, (26.9% identity in 788 aa)" FT /product="MS ion channel and efhand; no apparent S. FT cerevisiae ortholog" FT /fasta_file="fasta/c1183.tab.seq.04855.out" FT /label=SPCC31H12.01 FT /note="SPCC31H12.01, len:977, FT SIMILARITY:Schizosaccharomyce s pombe, O14050, FT hypothetical protein (840 aa), fasta scor es: opt: 667, FT E():0, (26.9% identity in 788 aa)" FT /product=" DUF0003, Pfb_28723 and efhand; no apparent S. FT cerevisiae ortholog" FT /fasta_file="fasta/c31H12.tab.seq.05002.out" FT CDS 524132..525001 FT /colour=7 FT /gene="SPCC10H11.02" FT /gene="SPCP31B10.01" FT /label=SPCC10H11.02 FT /note="SPCC10H11.02, len:209, SIMILARITY:Homo sapiens, FT BAA91724, cDNA flj10634 fis, clone nt2rp2005654, weakly FT similarto cysteine string protein., (304 aa), fasta FT scores: opt: 376, E():3.3e-13, (34.5% identity in 203 aa)" FT /product="DNAJ domain protein; no apparent S. cerevisiae FT ortholog" FT /fasta_file="fasta/c10H11.tab.seq.05379.out" FT /label=SPCP31B10.01 FT /note="SPCP31B10.01, len:113" FT /fasta_file="fasta/p31B10.tab.seq.05300.out" FT CDS 310539..312686 FT /colour=10 FT /gene="SPCC553.01c" FT /label=SPCC553.01c FT /note="SPCC553.01c, len:>389, SIMILARITY:Saccharomyces FT cere visiae, YGR042W, YG1T_YEAST, hypothetical 31.0 kD FT protein, (271 aa), fasta scores: opt: 138, E():0.0033, FT (26.5% identity in 204 aa)" FT /product="hypothetical protein; may normally be involved FT in signal transduction, as the only detectable defect of FT the null mutant of the S. cerevisiae homolog YGR042w is in FT heterologous signal transduction" FT /fasta_file="fasta/c553.tab.seq.04707.out" FT /gene="SPCC736.01c" FT /label=SPCC736.01 FT /note="SPCC736.01, len:385, SIMILARITY:Cricetulus griseus, FT RPB1_CRIGR, DNA-directed RNA polymerase ii largest subunit, FT (467 aa), fasta scores: opt: 186, E():0.0011, (23.7% FT identity in 316 aa)" FT /product="hypothetical protein; may normally be involved FT in signal transduction, as the only detectable defect of FT the null mutant of the yeast homolog YGR042W is in FT heterologous signal transduction" FT /fasta_file="fasta/c736.tab.seq.04558.out" FT CDS join(237554..237923,237975..238080,238139..238533, FT 238588..239105) FT /colour=7 FT /gene="SPCC1529.01" FT /gene="SPCC794.14" FT /label=SPCC1529.01 FT /note="SPCC1529.01, len:462, SIMILARITY:Penicillium FT olsonii., CAB46647, putative multiple drug resistance FT protein., (652 aa), fasta scores: opt: 870, E():0, (33.7% FT identity in 466 aa)" FT /product="MFS multidrug efflux transporter" FT /fasta_file="fasta/c1529.tab.seq.05323.out" FT /note="SPCC1529.01, len:33, SIMILARITY:Schizosaccharomyces FT pombe, O59750, hypothetical 39.1 kD protein., (349 aa), FT fasta scores: opt: 104, E():0.023, (51.9% identity in 27 FT aa)" FT /fasta_file="fasta/c794.tab.seq.04669.out" FT CDS join(215424..215600,215850..216078,216187..216509, FT 216590..216910) FT /colour=10 FT /gene="SPCC1235.15" FT /gene="SPCC548.01" FT /label=SPCC1235.15 FT /note="SPCC1235.15, len:227, SIMILARITY:Saccharomyces FT cerevisiae, Q08650, chromosome xv reading frame orf FT yor245c., (4 18 aa), fasta scores: opt: 451, E():0, (38.9% FT identity in 2 70 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YOR245C" FT /fasta_file="fasta/c1235.tab.seq.04446.out" FT /label=SPCC548.01 FT /note="SPCC548.01, len:155, SIMILARITY:Caenorhabditis FT elegans., O01881, cosmid k07b1., (339 aa), fasta scores: FT opt: 475, E():2.3e-26, (50.0% identity in 140 aa)" FT /fasta_file="fasta/c548.tab.seq.05382.out" FT CDS 80547..82040 FT /colour=7 FT /gene="SPCC757.14" FT /gene="SPCC613.01" FT /label=SPCC757.14 FT /note="SPCC757.14, len:256, SIMILARITY:Schizosaccharomyces FT pombe, Q12519, hypothetical 56.1 kD protein, (500 aa), FT fast a scores: opt: 908, E():0, (58.5% identity in 246 aa)" FT /product="MFS transporter of unknown specificity; no FT apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c757.tab.seq.04932.out" FT /label=SPCC613.01 FT /note="SPCC613.01, len:497, shows strong similar to SPCC FT 613.02, SIMILARITY:Schizosaccharomyces pombe, Q12519, FT hypothetical 56.1 kD protein, (500 aa), fasta scores: opt: FT 1827, E():0, (56.0% identity in 486 aa)" FT /product="MFS transporter of unknown specificity; similar FT S. pombe SPCC613.02 and S. pombe SPCC330.07c and FT SPCC757.11c (paralogs); conserved in A. thaliana; no FT apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c613.tab.seq.00029.out" FT CDS 32624..33393 FT /colour=4 FT /gene="SPCP20C8.03" FT /label=SPCP20C8.03 FT /note="SPCP20C8.03, len:" FT /product="hypothetical repeat containing protein; FT duplicated in S. pombe" FT /pseudo FT /fasta_file="fasta/p20C8.tab.seq.05391.out" FT /fasta_file="fasta/c1884.tab.seq.04999.out" FT CDS 43854..45071 FT /colour=2 FT /gene="nic1" FT /gene="SPCC1884.02" FT /gene="SPCC757.01" FT /label=nic1 FT /note="SPCC1884.02, len:244, SIMILARITY:Alcaligenes FT eutroph us., HOXN_ALCEU, high-affinity nickel transport FT protein., ( 351 aa), fasta scores: opt: 537, E():0, (39.0% FT identity in 223 aa)" FT /product="NiCoT heavy metal ion transporter; no apparent FT S. cerevisiae ortholog" FT /fasta_file="fasta/c1884.tab.seq.05001.out" FT /note="SPCC757.01, SIMILARITY:Salmonella typhi., O68290, FT hypothetical 31.8 kD protein., (294 aa), fasta scores: FT opt: 644, E():0, (41.3% identity in 264 aa)" FT /fasta_file="fasta/c757.tab.seq.04919.out" FT CDS complement(102685..105576) FT /colour=2 FT /gene="rhp16" FT /gene="rad16" FT /gene="SPCC613.13c" FT /gene="SPCC330.01c" FT /label=rhp16 FT /note="SPCC613.13c, len:963" FT /product="nucleotide-excision repair protein; zinc finger FT protein; zf-C3HC4 type (RING finger); SNF2 family FT helicase; similar to S. cerevisiae RAD16" FT /fasta_file="fasta/c613.tab.seq.00031.out" FT /note="SPCC330.01c, len:688" FT /fasta_file="fasta/c330.tab.seq.00019.out" FT CDS 174183..176159 FT /colour=8 FT /gene="SPCC320.02c" FT /gene="SPCC1235.01" FT /label=SPCC320.02c FT /note="SPCC320.02c, len:658, contains ~37 copies of a 7-10 FT repeat consensus 'PMEEITTMTI' and a S/N rich C terminal FT region, SIMILARITY:Homo sapiens, MUC2_HUMAN, mucin 2 , FT (5179 aa), fasta scores: opt: 455, E():8.8e-15, (34.6% FT identity in 341 aa)" FT /product="hypothetical T/N-rich protein; contains ~37 FT copies of a 7-10 repeat consensus 'PMEEITTMTI' and a S/N FT rich C terminal region" FT /fasta_file="fasta/c320.tab.seq.04476.out" FT /label=SPCC1235.01 FT /note="SPCC1235.01" FT /fasta_file="fasta/c1235.tab.seq.04432.out" FT CDS 279434..280999 FT /colour=7 FT /gene="SPCC553.12c" FT /gene="SPCC794.13" FT /label=SPCC794.13 FT /note="SPCC794.13, len:154, SIMILARITY:Euglena gracilis., FT YCF9_EUGGR, hypothetical 7.6 kD protein, (65 aa), fasta FT scores: opt: 100, E():0.99, (29.2% identity in 65 aa)" FT /product="low similar to NADH dehydrogenase subunit 2; no FT apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c794.tab.seq.04683.out" FT /label=SPCC553.12c FT /note="SPCC553.12c, len:>420" FT /product="low similar to NADH dehydrogenase subunit 2; by FT multiple alignment; no apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c553.tab.seq.04696.out" FT CDS join(354456..354756,354856..354946,355269..357252) FT /colour=8 FT /gene="SPCC594.01" FT /gene="SPCC736.16" FT /label=SPCC736.16 FT /note="SPCC736.16, len:>231" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c736.tab.seq.04573.out" FT /fasta_file="fasta/c594.tab.seq.00008.out" FT /label=SPCC594.01 FT /note="SPCC594.01, len:>697" FT CDS join(405612..405829,406303..407251) FT /colour=2 FT /gene="rpt4" FT /gene="SPCC1682.16" FT /gene="SPCC306.01" FT /label=rpt4 FT /note="SPCC1682.16, len:249, SIMILARITY:Homo sapiens, FT PRSX_HUMAN, 26s protease regulatory subunit s10b, (389 aa), FT fasta scores: opt: 1234, E():0, (74.4% identity in 246 FT aa)" FT /product="19S proteasome regulatory subunit" FT /fasta_file="fasta/c1682.tab.seq.04723.out" FT /note="SPCC306.01, len:>184, SIMILARITY:Saccharomyces FT cerevisiae, SUG2_YEAST, putative 26s protease subunit sug2, FT (437 aa), fasta scores: opt: 937, E():0, (79.7% identity FT in 172 aa)" FT /fasta_file="fasta/c306.tab.seq.05211.out" FT CDS complement(470668..472068) FT /EC_number="1.1.1.95" FT /colour=7 FT /gene="SPCC4G3.01" FT /gene="SPCC364.07" FT /label=SPCC4G3.01 FT /note="SPCC4G3.01, len:466, SIMILARITY:Saccharomyces FT cerevisiae, SERY_YEAST, putative d-3-phosphoglycerate FT dehydrogenase yil074w, (469 aa), fasta scores: opt: 1959, FT E():0, (64.8% identity in 460 aa)" FT /product="d-3 phosphoglycerate dehydrogenase" FT /fasta_file="fasta/c4G3.tab.seq.04420.out" FT /label=SPCC364.07 FT /note="SPCC364.07, SIMILARITY:Saccharomyces cerevisiae, FT SERY_YEAST, putative d-3-phosphoglycerate dehydrogenase FT yil074w, (469 aa), fasta scores: opt: 176, E():4e-06, FT (45.3% identity in 75 aa)" FT /product="d-3-phosphoglycerate dehydrogenase" FT /fasta_file="fasta/c364.tab.seq.04425.out" FT CDS join(541275..541388,541569..545744) FT /colour=10 FT /gene="SPCP31B10.09" FT /gene="SPCC962.01" FT /label=SPCP31B10.09 FT /note="SPCP31B10.09, len:1429, FT SIMILARITY:Schizosaccharomyces pombe, CAB52146, putative FT c2 domain family protein., (1225 aa), fasta scores: opt: FT 1131, E():0, (27.2% identity in 1241 aa)" FT /product="C2 domain family protein" FT /fasta_file="fasta/p31B10.tab.seq.05308.out" FT /label=SPCC962.01 FT /note="SPCC962.01, len:514aa, similarity: YML072C, FT YMH2_YE AST, hypothetical 171.1 kD protein, (1545aa), FT fasta scores, opt:435, E():1.9e-06, (25.6% identity in 539 FT aa overlap)" FT /fasta_file="fasta/c962.tab.seq.04519.out" FT CDS join(634309..634339,634389..634560,634620..634651, FT 634717..636761) FT /colour=2 FT /gene="sec23a" FT /gene="SPCC31H12.07" FT /gene="SPCC5E4.01" FT /label=sec23a FT /note="SPCC31H12.07, len:759, SIMILARITY:Homo sapiens, FT S23B _HUMAN, protein transport protein sec23 homolog FT isoform b., (767 aa), fasta scores: opt: 2947, E():0, FT (57.7% identity in 761 aa)" FT /product="putative protein transport protein" FT /fasta_file="fasta/c31H12.tab.seq.05008.out" FT /note="SPCC5E4.01, len:63, SIMILARITY:Schizosaccharomyces FT pombe, O94672, protein transport protein sec23 homolog., FT (765 aa), fasta scores: opt: 262, E():3.6e-14, (62.9% FT identity in 62 aa)" FT /product="protein transport protein" FT /fasta_file="fasta/c5E4.tab.seq.05010.out" FT CDS join(743004..743034,743077..747752) FT /colour=10 FT /gene="SPCC18B5.13" FT /gene="SPCC14G10.02" FT /label=SPCC18B5.13 FT /note="SPCC18B5.13, len:363, SIMILARITY:Saccharomyces FT cerevisiae, YKB4_YEAST, hypothetical 203.3 kD protein in FT put3-arc19 intergenic region, (1764 aa), fasta scores: FT opt: 162, E():0.0037, (25.9% identity in 363 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YKL014C" FT /fasta_file="fasta/c18B5.tab.seq.05239.out" FT /gene="SPBC18B5.13" FT /label=SPCC14G10.02 FT /note="SPCC14G10.02, len:1568, SIMILARITY:Saccharomyces FT cer evisiae, YKL014C, YKB4_YEAST, hypothetical protein FT (1764 a a), fasta scores: opt: 285, E():8.9e-09, (21.0% FT identity in 1675 aa)" FT /fasta_file="fasta/c14G10.tab.seq.04994.out" FT CDS 793179..796211 FT /colour=2 FT /gene="pma2" FT /gene="SPCC1020.01c" FT /gene="SPCC1393.01" FT /label=pma2 FT /note="SPCC1020.01c" FT /product="P-type proton ATPase" FT /fasta_file="fasta/c1020.tab.seq.04623.out" FT /note="SPCC1393.01, len:546" FT /fasta_file="fasta/c1393.tab.seq.05159.out" FT CDS complement(832347..833000) FT /colour=8 FT /gene="SPCC2H8.05c" FT /gene="SPCC63.01c" FT /label=SPCC2H8.05c FT /note="SPCC2H8.05c, len:203, SIMILARITY:Caenorhabditis FT elegans, Q22010, r186.4 protein., (643 aa), fasta scores: FT opt: 139, E():0.28, (29.2% identity in 168 aa)" FT /product="hypothetical protein; sequence orphan; predicted FT coiled-coil region" FT /fasta_file="fasta/c2H8.tab.seq.05176.out" FT /label=SPCC63.01c FT /note="SPCC63.01c," FT /fasta_file="fasta/c63.tab.seq.04817.out" FT CDS 900402..903137 FT /colour=2 FT /gene="cdc21" FT /gene="mcm4" FT /gene="SPCC16A11.17" FT /gene="SPCC24B10.01" FT /label=cdc21 FT /note="possibly spliced at C-term" FT /product="MCM complex subunit; required for initiation of FT DNA replication" FT /fasta_file="fasta/c16A11.tab.seq.05267.out" FT /note="SPCC24B10.01, len:407, possibly spliced at C-term" FT /product="cdc21 protein" FT CDS 997688..998620 FT /colour=2 FT /gene="mad3" FT /gene="SPCC895.02" FT /gene="SPCC1795.01c" FT /label=mad3 FT /note="SPCC1795.01c see full length protein in c895" FT /product="Spindle-assembly checkpoint protein" FT /fasta_file="fasta/c1795.tab.seq.04518.out" FT /note="SPCC895.02, len:310, SIMILARITY: to the N-terminal FT of Emericella nidulans, O59901, spindle assembly FT checkpoint protein slda, (1216 aa), fasta scores: opt: 425, FT E():1.7e-2 0, (33.5% identity in 337 aa)" FT /fasta_file="fasta/c895.tab.seq.05080.out" FT CDS join(995522..995886,995943..996816) FT /colour=7 FT /gene="SPCC1795.02c" FT /gene="SPCC895.01" FT /label=SPCC1795.02c FT /note="SPCC1795.02c, len:411, SIMILARITY:Pharbitis nil, FT Q9ZQT4, h+/ca2+ exchanger 2., (435 aa), fasta scores: opt: FT 873, E():0, (35.7% identity in 412 aa)" FT /product="CaCA proton/calcium exchanger" FT /fasta_file="fasta/c1795.tab.seq.04517.out" FT /label=SPCC895.01 FT /note="SPCC895.01, len:>394, SIMILARITY:Pharbitis nil, FT Q9ZQT4, h+/ca2+ exchanger 2., (435 aa), fasta scores: opt: FT 863, E():0, (35.8% identity in 408 aa)" FT /fasta_file="fasta/c895.tab.seq.05079.out" FT CDS complement(join(1032939..1033373,1033433..1033456)) FT /colour=2 FT /gene="rps18-2" FT /gene="SPCC1259.01c" FT /gene="SPCC825.06c" FT /label=rps18-2 FT /note="SPCC825.06c, len:83" FT /product="ribosomal protein Subunit s18" FT /fasta_file="fasta/c825.tab.seq.05315.out" FT /note="SPCC1259.01c, len:152" FT /product="40S ribosomal protein S18" FT /fasta_file="fasta/c1259.tab.seq.05123.out" FT misc_feature 1070904..1070999 FT /note="nominal overlap with SPCC1259 S. pombe chromosome 3" FT misc_feature complement(1070904..1072203) FT /colour=1 FT /note="centromeric region duplicated in SPCC4B3 S. pombe FT chromosome 3" FT tRNA 1071093..1071175 FT /note="tRNA Lys anticodon CTT, Cove score 57.56" FT misc_feature 1074049..1074054 FT /note="ClaI site" FT misc_feature complement(1076115..1078499) FT /colour=3 FT /note="cen3b dgIII repeat" FT misc_feature 1078494..1078884 FT /colour=1 FT /note="region between dg and dh repeat" FT misc_feature 1078934..1082875 FT /colour=2 FT /note="cen3a dhIII repeat" FT misc_feature 1080690..1080695 FT /note="ClaI site" FT misc_feature complement(1082876..1083348) FT /colour=3 FT /note="dgIII repeat partial" FT CDS 2413265..2413888 FT /colour=2 FT /gene="ade5" FT /gene="ade8" FT /note="SPCC24E4.01, len:207; NOTE:misnamed as ade8 from S. FT cerevisiae homolog, but actually maps to the ade5 locus" FT /product="glycinamide ribonucleotide transformylase" FT /fasta_file="fasta/c24E4.tab.seq.05380.out" FT /gene="SPCC569.08c" FT /label=ade5 FT /note="SPCC569.08c, len:197, NOTE:misnamed as ade8 from S. FT cerevisiae homolog, but actually maps to the ade5 locus" FT /product="glycinamide ribonucleotide transformylase; FT subcellular localization of GFP fusion- Nucleus and FT cytoplasmic; purine biosynthetic pathway; NOTE:misnamed as FT ade8 from S. cerevisiae homolog, but actually maps to the FT ade5 locus" FT /fasta_file="fasta/c569.tab.seq.05071.out" FT CDS complement(2248492..2249064) FT /colour=2 FT /gene="mog1" FT /gene="SPCC1840.01c" FT /gene="SPCC790.04c" FT /label=mog1 FT /note="SPCC790.04c, len:190, SEE spcc1840.01c" FT /product="Ran-GTP-binding protein; possibly facilitates FT the generation of Ran-GTP from Ran-GDP in the nucleus; FT complemented by S. cerevisiae Mog1p; possibly involved in FT nuclear protein import; similar to S. cerevisiae MOG1" FT /fasta_file="fasta/c790.tab.seq.05027.out" FT /note="SPCC1840.01c, len:190; similarity: to yeast mog1; FT in teracts with Gsp1p, D1029765, fasta scores, opt:235, FT E():5. 6e-10 (30.7% identity in 199 aa overlap)" FT /fasta_file="fasta/c1840.tab.seq.04933.out" FT CDS complement(join(1797181..1797582,1797658..1797738, FT 1797808..1798140)) FT /colour=10 FT /gene="SPCC285.02c" FT /gene="SPCC1442.17c" FT /label=SPCC1442.17c FT /note="SPCC1442.17c, len:271, SIMILARITY:Saccharomyces FT cere visiae, YNL265C, YN05_YEAST, hypothetical 34.5 kD FT protein i n pik1-pol2 intergenic region., (298 aa), fasta FT scores: opt : 245, E():2.7e-17, (25.9% identity in 290 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT IST1" FT /fasta_file="fasta/c1442.tab.seq.05044.out" FT /label=SPCC285.02c FT /note="SPCC285.02c, len:271, SIMILARITY:Saccharomyces FT cerevisiae, YNL265C, YN05_YEAST, hypothetical 34.5 kD FT protein in pik1-pol2 intergenic region., (298 aa), fasta FT scores: opt: 245, E():3e-08, (25.9% identity in 290 aa)" FT /fasta_file="fasta/c285.tab.seq.04800.out" FT CDS join(1503592..1503620,1503664..1505215,1505264..1505356) FT /colour=2 FT /gene="snw1" FT /gene="SPCC188.11" FT /gene="SPCC584.08" FT /label=snw1 FT /note="SPCC188.11, len:556, SIMILARITY:Arabidopsis FT thaliana, O80653, putative nuclear protein, (613 aa), FT fasta scores: opt: 1394, E():0, (42.9% identity in 574 aa)" FT /product="putative chromatin binding snw family nuclear FT protein; putative spliceosome associated protein; by FT similar to human skip/snw1; no apparent S. cerevisiae FT ortholog" FT /fasta_file="fasta/c188.tab.seq.05156.out" FT /note="SPCC584.08, len:557, SIMILARITY:Arabidopsis FT thaliana , O80653, putative nuclear protein., (613 aa), FT fasta scores : opt: 1394, E():0, (42.9% identity in 574 FT aa)" FT /fasta_file="fasta/c584.tab.seq.04646.out" FT CDS join(1505841..1505899,1505962..1507045) FT /colour=2 FT /gene="spn6" FT /gene="SPCC584.09" FT /label=spn6 FT /note="SPCC188.12, len:379, SIMILARITY:Schizosaccharomyces FT pombe, SPN4_SCHPO, septin homolog spn4, (380 aa), fasta FT scores: opt: 1039, E():0, (40.2% identity in 373 aa)" FT /product="septin; sporulation specific protein; GTP_cdc FT domain protein" FT /fasta_file="fasta/c188.tab.seq.05157.out" FT /gene="SPCC188.12" FT /note="SPCC584.09, len:380, SIMILARITY:Schizosaccharomyces FT pombe, SPN4_SCHPO, septin homolog spn4., (380 aa), fasta FT sc ores: opt: 1039, E():0, (40.2% identity in 373 aa)" FT /fasta_file="fasta/c584.tab.seq.04647.out" FT CDS 2280233..2280778 FT /colour=7 FT /gene="SPCC1840.11" FT /gene="SPCC965.01" FT /label=SPCC1840.11 FT /note="SPCC1840.11" FT /product="putative exosome 3'-5' exonuclease complex; FT cytoplasmic and nucleolar forms, possibly involved in FT kinetochore-related function" FT /fasta_file="fasta/c1840.tab.seq.04943.out" FT /label=SPCC965.01 FT /note="SPCC965.01, 181aa, SIMILARITY: S. cerevisiae, FT CSL4_YEAST, 3'-5' EXORIBONUCLEASE CSL4, (292 aa), fasta FT scores, opt:348, E(): 4.1e-16, (40.6% identity in 160 aa FT overlap)" FT /fasta_file="fasta/c965.tab.seq.04748.out" FT CDS 1707361..1707897 FT /colour=8 FT /gene="SPCC417.13" FT /gene="SPCC191.01" FT /label=SPCC417.13 FT /note="SPCC417.13, len:178" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c417.tab.seq.05121.out" FT /label=SPCC191.01 FT /note="SPCC191.01, len:178" FT /fasta_file="fasta/c191.tab.seq.05177.out" FT CDS join(1769893..1770066,1770124..1771638) FT /colour=8 FT /gene="SPCC1450.18" FT /gene="SPCC1442.02" FT /label=SPCC1450.18 FT /note="SPCC1450.18, len:562" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1450.tab.seq.05207.out" FT /label=SPCC1442.02 FT /note="SPCC1442.02, len:562" FT /fasta_file="fasta/c1442.tab.seq.05029.out" FT CDS join(1772392..1772787,1772911..1773531) FT /colour=7 FT /gene="SPCC1450.19" FT /gene="SPCC1442.03" FT /label=SPCC1450.19 FT /note="SPCC1450.19, len:338, SIMILARITY:Saccharomyces FT cerevisiae, YM39_YEAST, putative mitochondrial carrier FT ymr166c., (368 aa), fasta scores: opt: 960, E():0, (46.6% FT identity in 322 aa)" FT /product="putative mitochondrial carrier protein; similar FT to S. cerevisiae YMR166C" FT /fasta_file="fasta/c1450.tab.seq.05208.out" FT /label=SPCC1442.03 FT /note="SPCC1442.03, len:338, SIMILARITY:Saccharomyces FT cerev isiae, YMR166C, YM39_YEAST, putative mitochondrial FT carrier ymr166c., (368 aa), fasta scores: opt: 960, E():0, FT (46.6% i dentity in 322 aa)" FT /product="MC transporter of unknown specificity" FT /fasta_file="fasta/c1442.tab.seq.05030.out" FT misc_feature 1084349..1085647 FT /colour=2 FT /note="dhIII repeat partial" FT misc_feature complement(1085648..1088032) FT /colour=3 FT /note="dgIII repeat cen3b 250bp" FT misc_feature 1088027..1088417 FT /colour=12 FT /note="region between dg and dh repeat" FT misc_feature 1088467..1092408 FT /colour=2 FT /note="cen3a dhIII repeat" FT misc_feature complement(1091335..1091383) FT /note="this region of sequence is absent from the region FT of overlap with pB5A12 checking by PCR" FT BLASTN_HIT 1091384..1101485 FT /note="50465 (+1) 2765 12866 SPCPB5A12 S. pombe chromosome FT 3" FT misc_feature 1091819..1101485 FT misc_feature 1092215..1092605 FT /colour=11 FT /note="cen3xc central region" FT misc_feature 1092600..1097963 FT /colour=1 FT /note="imr3L" FT tRNA 1093337..1093407 FT /note="tRNA Asp anticodon GTC, Cove score 70.49" FT tRNA complement(1093495..1093567) FT /note="tRNA Arg anticodon ACG, Cove score 75.46" FT tRNA 1093834..1093916 FT /note="tRNA Val anticodon AAC, Cove score 64.30" FT intron 1093872..1093880 FT /note="intron tRNA Val anticodon AAC" FT misc_feature 1097964..1101485 FT /colour=4 FT /note="cnt3 partial" FT tRNA complement(1093983..1094054) FT /note="tRNA Thr anticodon AGT, Cove score 75.01" FT tRNA complement(1096985..1097085) FT /note="tRNA Leu anticodon CAA, Cove score 56.07" FT intron complement(1097029..1097047) FT /note="intron tRNA Leu anticodon CAA" FT tRNA complement(1098399..1098470) FT /note="tRNA Glu anticodon CTC, Cove score 74.15" FT misc_feature complement(1091819..1092458) FT /colour=2 FT /note="dhIII repeat" FT misc_feature 1091819..1101485 FT misc_feature 1092215..1092605 FT /colour=11 FT /note="cen3xc central region" FT misc_feature 1092600..1097959 FT /colour=1 FT /note="imr3L" FT misc_feature 1097960..1102830 FT /colour=4 FT /note="cnt3" FT misc_feature 1102831..1108194 FT /colour=1 FT /note="imr3R" FT tRNA 1103709..1103809 FT /note="tRNA Leu anticodon CAA, Cove score 56.07" FT intron 1103747..1103765 FT /note="intron tRNA Leu anticodon CAA" FT tRNA 1106740..1106811 FT /note="tRNA Thr anticodon AGT, Cove score 75.01" FT tRNA complement(1106878..1106960) FT /note="tRNA Val anticodon AAC, Cove score 64.30" FT intron complement(1106914..1106922) FT /note="intron tRNA Val anticodon AAC" FT tRNA 1107227..1107299 FT /note="tRNA Arg anticodon ACG, Cove score 75.46" FT tRNA complement(1107387..1107457) FT /note="tRNA Asp anticodon GTC, Cove score 70.49" FT misc_feature complement(1108189..1108579) FT /colour=11 FT /note="cen3xc central region" FT misc_feature complement(1108337..1112278) FT /colour=2 FT /note="cen3a dhIII repeat" FT misc_feature 1112328..1112628 FT /colour=12 FT /note="region between dh and dg repeat" FT misc_feature 1112713..1115098 FT /colour=3 FT /note="cen3b dgIII repeat" FT misc_feature complement(1115097..1119038) FT /colour=2 FT /note="cen3a dhIII repeat" FT misc_feature 1119088..1119478 FT /colour=12 FT /note="region between dg and dh repeat" FT misc_feature 1119473..1121857 FT /colour=3 FT /note="cen3b dgIII repeat" FT misc_feature complement(1121857..1125798) FT /colour=2 FT /note="cen3a dhIII repeat" FT rRNA complement(1475119..1475327) FT /note="5s rRNA gene" FT /colour=4 FT /note="S. pombe 5s rRNA gene and flanks" FT tRNA 1475934..1476016 FT /colour=6 FT /note="tRNA Lys anticodon CTT, Cove score 74.69" FT /note="tRNA Lys anticodon CTT" FT LTR 1401770..1402118 FT /colour=4 FT /note="wtf" FT /note="partial lone tf2-type LTR" FT repeat_region 1122437..1122553 FT /label={acttccacttaccacttccacttaccacttccacttacc}3 FT /note="(acttccacttaccacttccacttaccacttccacttacc)3" FT /note="DNA in this region has very low (G-C)/(G+C); hardly FT any G's on the top strand in this orientation" FT misc_feature 1124562..1125156 FT /colour=5 FT /note="partial hit to cen117 dhIIIa repeat" FT misc_feature 1125143..1125798 FT /colour=5 FT /note="partial hit to cen117 dhIIIa repeat" FT misc_feature 1125848..1126238 FT /colour=12 FT /note="region between dg and dh repeat" FT misc_feature 1126233..1126482 FT /colour=3 FT /note="cen3b dgIII repeat" FT misc_feature complement(1128617..1132558) FT /colour=2 FT /note="cen3a dhIII repeat" FT repeat_region 1129197..1129313 FT /label={acttccacttaccacttccacttaccacttccacttacc}3 FT /note="(acttccacttaccacttccacttaccacttccacttacc)3" FT /note="DNA in this region has very low (G-C)/(G+C); hardly FT any G's on the top strand in this orientation" FT misc_feature 1131322..1131916 FT /colour=5 FT /note="partial hit to cen117 dhIIIa repeat" FT misc_feature 1131903..1132558 FT /colour=5 FT /note="partial hit to cen117 dhIIIa repeat" FT misc_feature 1132608..1132998 FT /colour=12 FT /note="region between dg and dh repeat" FT misc_feature 1132993..1135378 FT /colour=3 FT /note="cen3b dgIII repeat" FT misc_feature 1139408..1139604 FT /note="nominal overlap with SPCC4B3 S. pombe chromosome 3" FT misc_feature 1139408..1139604 FT /note="nominal overlap with pB5A12 S. pombe chromosome 3" FT tRNA complement(1140436..1140518) FT /note="tRNA Lys anticodon CTT, Cove score 74.69" FT intron complement(1140472..1140479) FT /note="intron tRNA Lys anticodon CTT" FT tRNA complement(1143092..1143164) FT /note="tRNA Phe anticodon GAA, Cove score 69.56" FT CDS complement(1143991..1144941) FT /colour=10 FT /gene="SPCC4B3.18" FT /label=SPCC4B3.18 FT /note="SPCC4B3.18, len:316, SIMILARITY:Drosophila FT melanogaster, AAD34738, hypothetical 35.8 kD protein., FT (313 aa), fasta scores: opt: 782, E():0, (42.2% identity FT in 308 aa)" FT /product="conserved protein; yeast YIL083C homolog is FT induced by mating pheramones; similar to S. cerevisiae FT YIL083C" FT /fasta_file="fasta/c4B3.tab.seq.05324.out" FT CDS complement(1145956..1146807) FT /colour=7 FT /gene="cbp3" FT /gene="SPCC4B3.17" FT /label=cbp3 FT /note="SPCC4B3.17, len:283, putative transit peptide (1- FT 40aa), SIMILARITY:Saccharomyces cerevisiae, CBP3_YEAST, FT cbp3 protein ., (335 aa), fasta scores: opt: 493, E():2.9e- FT 25, (35.2% identity in 284 aa)" FT /product="putative ubiquinol cytochrome c reductase FT assembly factor; mitochondrial; similar to S. cerevisiae FT CBP3" FT /fasta_file="fasta/c4B3.tab.seq.05325.out" FT CDS complement(1147283..1148041) FT /colour=10 FT /gene="SPCC4B3.16" FT /label=SPCC4B3.16 FT /note="SPCC4B3.16, len:252, SIMILARITY:Homo sapiens, FT O75663, dj69e11.3, (272 aa), fasta scores: opt: 433, FT E():6.2e-22, (31.2% identity in 250 aa)" FT /product="conserved protein; similar to S. cerevisiae FT TIP41 which regulates the TOR signalling pathway" FT /fasta_file="fasta/c4B3.tab.seq.05326.out" FT CDS complement(1148353..1151115) FT /colour=2 FT /gene="dmf1" FT /gene="mid1" FT /gene="SPCC4B3.15" FT /label=dmf1 FT /note="SPCC4B3.15, len:920" FT /product="septum positioning protein" FT /fasta_file="fasta/c4B3.tab.seq.05327.out" FT CDS complement(1151742..1152614) FT /colour=8 FT /gene="SPCC4B3.14" FT /label=SPCC4B3.14 FT /note="SPCC4B3.14, len:290" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c4B3.tab.seq.05328.out" FT CDS complement(1153143..1154762) FT /colour=7 FT /gene="SPCC4B3.13" FT /label=SPCC4B3.13 FT /note="SPCC4B3.13, len:539, SIMILARITY:Schizosaccharomyces FT pombe, CAB53410, conserved protein upf0013., (533 aa), FT fasta scores: opt: 1329, E():0, (41.7% identity in 482 aa)" FT /product="conserved protein; UPF0013 family; putative FT membrane transporter" FT /fasta_file="fasta/c4B3.tab.seq.05329.out" FT misc_feature complement(1153245..1154072) FT /colour=9 FT /note="Pfam match to entry PF01554 UPF0013, FT Uncharacterized membrane protein family," FT intron complement(1155124..1155224) FT /colour=7 FT /note="Intron predicted by HMM_intron, Score=8.80" FT CDS complement(1155181..1156506) FT /colour=7 FT /gene="SPCC4B3.12" FT /label=SPCC4B3.12 FT /note="SPCC4B3.12, len:441, possibility of splicing at FT codon 427, LOW SIMILARITY:Caenorhabditis elegans., FT YQD5_CAEEL, hypothetical 33.2 kD protein c32d5.5 in FT chromosome ii., (288 aa), fasta scores: opt: 431, E():5.6e- FT 21, (31.3% identity in 233 aa)" FT /product="SET domain protein; putative chromatin FT associated" FT /fasta_file="fasta/c4B3.tab.seq.05330.out" FT misc_feature complement(1155826..1156182) FT /colour=9 FT /note="Pfam match to entry PF00856 SET, SET domain," FT CDS 1157106..1157456 FT /colour=10 FT /gene="SPCC4B3.11c" FT /label=SPCC4B3.11c FT /note="SPCC4B3.11c, len:116, SIMILARITY:Saccharomyces FT cerevisiae, YAE6_YEAST, hypothetical protein, (118 aa), FT fasta scores: opt: 251, E():6.9e-11, (43.1% identity in FT 109 aa)" FT /product="hypothetical BolA domain-containing protein" FT /fasta_file="fasta/c4B3.tab.seq.05331.out" FT misc_feature 1157220..1157414 FT /colour=9 FT /note="Pfam match to entry PF01722 BolA, BolA-like protein, FT " FT CDS join(1159048..1159060,1159117..1161026) FT /colour=2 FT /gene="ipk1" FT /gene="SPCC4B3.10c" FT /label=ipk1 FT /note="SPCC4B3.10c, len:640, SIMILARITY low to yeast ipk1" FT /product="Inositol 1,3,4,5,6-pentakisphosphate (IP5) FT kinase" FT /fasta_file="fasta/c4B3.tab.seq.05332.out" FT CDS join(1161311..1161444,1161494..1161980) FT /colour=7 FT /gene="SPCC4B3.09c" FT /label=SPCC4B3.09c FT /note="SPCC4B3.09c, len:206, SIMILARITY:Saccharomyces FT cerevisiae, YGG8_YEAST, putative 60S ribosomal protein FT l7/l12 homolog, mitochondrial., (194 aa), fasta scores: FT opt: 321, E():8.9e-13, (58.0% identity in 138 aa)" FT /product="mitochondrial ribosomal protein l7/l12" FT /fasta_file="fasta/c4B3.tab.seq.05333.out" FT misc_feature 1161798..1161974 FT /note="Match to PF00542 Ribosomal_L12, Ribosomal protein FT L7/L12 C-terminal domain Score 71.71" FT CDS complement(1162236..1162892) FT /colour=8 FT /gene="SPCC4B3.08" FT /label=SPCC4B3.08 FT /note="SPCC4B3.08, len:218" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c4B3.tab.seq.05334.out" FT CDS complement(1163769..1164950) FT /colour=10 FT /gene="SPCC4B3.07" FT /label=SPCC4B3.07 FT /note="SPCC4B3.07, len:393, SIMILARITY:Saccharomyces FT cerevisiae, Q08421, chromosome xv reading frame orf FT yor051c., (412 aa), fasta scores: opt: 173, E():0.00093, FT (25.6% identity in 407 aa)" FT /product="similar to S. cerevisiae YOR051C which purifies FT as part of the nuclear pore complex" FT /fasta_file="fasta/c4B3.tab.seq.05335.out" FT CDS 1166088..1166690 FT /colour=10 FT /gene="SPCC4B3.06c" FT /label=SPCC4B3.06c FT /note="SPCC4B3.06c, len:200, SIMILARITY:Saccharomyces FT cerevisiae, Q07923, chromosome xii reading frame orf FT ylr011w., (191 aa), fasta scores: opt: 365, E():8.4e-18, FT (45.8% identity in 168 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YLR011W" FT /fasta_file="fasta/c4B3.tab.seq.05336.out" FT misc_feature join(1167471..1167504,1167562..1167596,1167643..1167667, FT 1167715..1168223,1168273..1168725) FT /note="Match to PF01208 URO-D, Uroporphyrinogen FT decarboxylase (URO-D) Score 582.69" FT CDS join(1167471..1167504,1167562..1167596,1167645..1168223, FT 1168273..1168737) FT /EC_number="4.1.1.37" FT /colour=7 FT /gene="SPCC4B3.05c" FT /label=SPCC4B3.05c FT /note="SPCC4B3.05c, len:370, SIMILARITY:Saccharomyces FT cerevisiae, DCUP_YEAST, uroporphyrinogen decarboxylase, FT (362 aa), fasta scores: opt: 811, E():0, (54.6% identity FT in 370 aa)" FT /product="putative uroporphyrinogen decarboxylase; similar FT to S. cerevisiae HEM12" FT /fasta_file="fasta/c4B3.tab.seq.05337.out" FT CDS join(1169630..1169829,1169879..1170053,1170111..1173686) FT /colour=10 FT /gene="SPCC4B3.04c" FT /label=SPCC4B3.04c FT /note="SPCC4B3.04c, len:1316, SIMILARITY:Caenorhabditis FT elegans., YOL4_CAEEL, hypothetical 152.4 kD protein FT zk370.4 in chromosome iii., (1351 aa), fasta scores: opt: FT 1353, E():0, (34.0% identity in 805 aa)" FT /product="hypothetical protein; UPF0028 family; cyclic FT nucleic acid binding family protein" FT /fasta_file="fasta/c4B3.tab.seq.05338.out" FT misc_feature 1171592..1171882 FT /colour=9 FT /note="Pfam match to entry PF00027 cNMP_binding, Cyclic FT nucleotide-binding domain," FT misc_feature 1172718..1173620 FT /note="Match to PF01173 UPF0028, Uncharacterized protein FT family UPF0028 Score 443.03" FT CDS 1174390..1176429 FT /colour=7 FT /gene="SPCC4B3.03c" FT /label=SPCC4B3.03c FT /note="SPCC4B3.03c, len:679, SIMILARITY:Saccharomyces FT cerevisiae, Q12296, chromosome xv reading frame orf FT yol060c., (706 aa), fasta scores: opt: 1535, E():0, (42.5% FT identity in 651 aa)" FT /product="possibly required for normal mitochondrial FT structure; similar to S. cerevisiae AMI3" FT /fasta_file="fasta/c4B3.tab.seq.05339.out" FT misc_feature 1174576..1175133 FT /colour=9 FT /note="Pfam match to entry PF01595 DUF21, Domain of FT unknown function," FT misc_feature 1175167..1175337 FT /colour=9 FT /note="Pfam match to entry PF00571 CBS, CBS domain," FT misc_feature 1175359..1175529 FT /colour=9 FT /note="Pfam match to entry PF00571 CBS, CBS domain," FT LTR complement(1177150..1177492) FT /note="TF2 LTR" FT CDS join(1177659..1177680,1177726..1177772,1177853..1177897, FT 1178029..1178304) FT /colour=7 FT /gene="SPCC4B3.02c" FT /label=SPCC4B3.02c FT /note="SPCC4B3.02c, len:129, SIMILARITY:Saccharomyces FT cerevisiae, YM8T_YEAST, hypothetical proteinYMR292W, (138 FT aa), fasta scores: opt: 373, E():1.2e-18, (45.8% identity FT in 118 aa)" FT /product="putative membrane protein; possibly required for FT ER to Golgi transport; similar to S. cerevisiae GOT1" FT /fasta_file="fasta/c4B3.tab.seq.05340.out" FT misc_feature complement(1178811..1179143) FT /note="Match to PF00581 Rhodanese, Rhodanese-like domain FT Score 81.77" FT misc_feature 1179084..1179191 FT /note="nominal overlap with plasmid p25A2, EM:AL133440 S. FT pombe chromosome 3" FT misc_feature complement(1179084..1179191) FT /note="nominal overlap with cosmid SPCC4B3, EM:AL132870 FT S.pombe chromosome 3" FT misc_feature complement(join(1179264..1179389,1179447..1179656)) FT /note="Match to PF00581 Rhodanese, Rhodanese-like domain FT Score 34.95" FT misc_feature complement(1179390..1179401) FT /colour=6 FT /note="ctaatattttag, splice branch and acceptor" FT misc_feature complement(1179441..1179446) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS complement(1180536..1183457) FT /colour=2 FT /gene="rhp26" FT /gene="SPCP25A2.02c" FT /label=rhp26 FT /note="SPCP25A2.02c, len:973" FT /product="DNA repair and recombination protein; SWI/SNF2 FT family; similar to S. cerevisiae RAD26" FT /fasta_file="fasta/p25A2.tab.seq.05354.out" FT misc_feature complement(1181241..1181495) FT /note="Match to PF00271 helicase_C, Helicases conserved C- FT terminal domain Score 102.23" FT misc_feature complement(1181643..1182620) FT /note="Match to PF00176 SNF2_N, SNF2 and others N-terminal FT domain Score 429.59" FT CDS join(1183696..1183890,1183950..1184840,1184896..1186068) FT /colour=7 FT /gene="SPCP25A2.03" FT /label=SPCP25A2.03 FT /note="SPCP25A2.03, len:752, possibility of 3' splicing, FT SIMILARITY:Homo sapiens, Q15219, protein p84., (657 aa), FT fasta scores: opt: 388, E():4e-16, (23.8% identity in 505 FT aa)" FT /product="vertebrate p84 (retinoblastoma binding) FT orthologue; putative RNA processing; no apparent S. FT cerevisiae ortholog" FT /fasta_file="fasta/p25A2.tab.seq.05355.out" FT misc_feature 1183891..1183896 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1183929..1183949 FT /colour=6 FT /note="ctaattgttattttcgtgtag, splice branch and acceptor" FT misc_feature 1184841..1184846 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1184885..1184895 FT /colour=6 FT /note="ctaatatgtag, splice branch and acceptor" FT misc_feature 1186395..1186493 FT /note="nominal overlap with cosmid SPCC550, EM:AL023592 FT S.pombe chromosome 3" FT CDS complement(join(1186788..1186871,1186918..1187067)) FT /colour=10 FT /gene="SPCC550.01c" FT /label=SPCC550.01c FT /note="SPCC550.01c, len:77, SIMILARITY:Saccharomyces FT cerevisiae, Q05809, chromosome xii cosmid 8167., (150 aa), FT fasta scores: opt: 213, E():2e-09, (54.0% identity in 50 FT aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YLR217W" FT /fasta_file="fasta/c550.tab.seq.04589.out" FT misc_feature complement(1186872..1186890) FT /colour=6 FT /note="ctaattctgatatttttag, splice branch and acceptor" FT misc_feature complement(1186912..1186917) FT /colour=6 FT /note="gtaatt, splice donor sequence" FT misc_feature complement(1186951..1186989) FT /colour=8 FT /note="PS00241 Growth factor and cytokines receptors FT family signature 1" FT CDS complement(join(1187293..1187724,1187785..1188141, FT 1188193..1188468)) FT /colour=2 FT /gene="ecm2" FT /gene="cwf5" FT /gene="SPCC550.02c" FT /label=ecm2 FT /note="SPCC550.02c, len:354, SIMILARITY:Caenorhabditis FT elegans., Q22412, t11g6.8 protein., (658 aa), fasta FT scores: opt: 483, E():5.6e-24, (29.8% identity in 363 aa)" FT /product="putative pre-mRNA splicing factor; 40S snRNP- FT containing complex; RNA-binding protein; similar to S. FT cerevisiae ECM2" FT /fasta_file="fasta/c550.tab.seq.04590.out" FT misc_feature complement(1187626..1187829) FT /colour=9 FT /note="Pfam match to entry rrm PF00076, RNA recognition FT mot if" FT misc_feature complement(1187725..1187735) FT /colour=6 FT /note="ctaacatttag, splice branch and acceptor" FT misc_feature complement(1187779..1187784) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1188142..1188157) FT /colour=6 FT /note="ctaacgttccatgaag, splice branch and acceptor" FT misc_feature complement(1188187..1188192) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS complement(1188635..1192276) FT /colour=7 FT /gene="SPCC550.03c" FT /label=SPCC550.03c FT /note="SPCC550.03c, len:1213, SIMILARITY:Caenorhabditis FT elegans., Q19103, hypothetical proteinf01g4.3., (1260 aa), FT fasta scores: opt: 1853, E():0, (37.8% identity in 1229 FT aa)" FT /product="putative DEAD/DEAH box helicase; similar to S. FT cerevisiae SKI2 part of a system to protect cells from FT double-stranded RNA (dsRNA) viruses" FT /fasta_file="fasta/c550.tab.seq.04591.out" FT misc_feature complement(1190201..1190479) FT /colour=9 FT /note="Pfam match to entry helicase_C PF00271, Helicases FT co nserved C-terminal domain" FT misc_feature complement(1190933..1191448) FT /note="Match to PF00270 DEAD, DEAD/DEAH box helicase Score FT 104.25" FT misc_feature complement(1191350..1191373) FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS complement(join(1192837..1192894,1192951..1193120, FT 1193167..1193314,1193373..1193971)) FT /colour=7 FT /gene="SPCC550.04c" FT /label=SPCC550.04c FT /note="SPCC550.04c, len:324, SIMILARITY:Homo sapiens, FT Q92535, phosphatidylinositol-glycan-class c, (297 aa), FT fasta scores: opt: 548, E():5.3e-29, (32.0% identity in FT 278 aa)" FT /product="phosphatidylinositol-glycan-class c; similar to FT S. cerevisiae GPI2" FT /fasta_file="fasta/c550.tab.seq.04592.out" FT misc_feature complement(1192895..1192919) FT /colour=6 FT /note="ctaaattctcacatatatatcttag, splice branch and FT accepto r" FT misc_feature complement(1192945..1192950) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(1193121..1193134) FT /colour=6 FT /note="ttaaccaattacag, splice branch and acceptor" FT misc_feature complement(1193161..1193166) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature complement(1193315..1193334) FT /colour=6 FT /note="ctaattatttttctttttag, splice branch and acceptor" FT misc_feature complement(1193367..1193372) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT CDS 1195097..1195708 FT /colour=8 FT /gene="SPCC550.05" FT /label=SPCC550.05 FT /note="SPCC550.05, len:203" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c550.tab.seq.04593.out" FT CDS complement(1196318..1196632) FT /colour=2 FT /gene="hsp10" FT /gene="SPCC550.06c" FT /label=hsp10 FT /note="SPCC550.06c, len:104" FT /product="heat shock protein (10 kD) mitochondrial" FT /fasta_file="fasta/c550.tab.seq.04594.out" FT misc_feature complement(1196324..1196608) FT /colour=9 FT /note="Pfam match to entry cpn10 PF00166, Chaperonins 10 FT Kd subunit" FT misc_feature complement(1196528..1196602) FT /colour=8 FT /note="PS00681 Chaperonins cpn10 signature" FT LTR complement(1196885..1196959) FT /note="degraded Tf2-type LTR" FT misc_feature complement(1197031..1197381) FT /note="fragment of retrotransposon translated region" FT CDS 1199090..1200691 FT /colour=7 FT /gene="SPCC550.07" FT /label=SPCC550.07 FT /note="SPCC550.07, len:533, SIMILARITY:Emericella nidulans, FT AMDS_EMENI, acetamidase, (548 aa), fasta scores: opt: FT 1072, E():0, (39.7% identity in 549 aa)" FT /product="putative acetamidase; similar to S. cerevisiae FT AMD2" FT /fasta_file="fasta/c550.tab.seq.04595.out" FT misc_feature 1199315..1200658 FT /note="Match to PF01425 Amidase, Amidase Score 527.43" FT misc_feature 1199702..1199797 FT /colour=8 FT /note="PS00571 Amidases signature" FT CDS 1201889..1202632 FT /colour=7 FT /gene="SPCC550.08" FT /label=SPCC550.08 FT /note="SPCC550.08, len:247, SIMILARITY:Mycobacterium FT tuberculosis., P96810, hypothetical 22.8 kD protein., (201 FT aa), fasta scores: opt: 229, E():3.1e-08, (29.9% identity FT in 211 aa)" FT /product="putative N acetyltransferase; no apparent S. FT cerevisiae ortholog" FT /fasta_file="fasta/c550.tab.seq.04596.out" FT CDS 1203435..1205042 FT /colour=10 FT /gene="SPCC550.09" FT /label=SPCC550.09 FT /note="SPCC550.09, len:535, LOW SIMILARITY:Saccharomyces FT cerevisiae, YB18_YEAST, hypothetical 48.6 kD protein in FT tyr1-sse2 intergenic region., (413 aa), fasta scores: opt: FT 149, E():0.18, (24.3% identity in 243 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YBR168W" FT /fasta_file="fasta/c550.tab.seq.04597.out" FT CDS 1205904..1207406 FT /colour=2 FT /gene="meu8" FT /gene="SPCC550.10" FT /label=meu8 FT /note="SPCC550.10, len:500, SIMILARITY:Amaranthus FT hypochondriacus, O22477, betaine aldehyde dehydrogenase, FT (500 aa), fasta scores: opt: 1445, E():0, (45.6% identity FT in 491 aa)" FT /product="putative betaine aldehyde dehydrogenase; meiotic FT expression upregulated" FT /fasta_file="fasta/c550.tab.seq.04598.out" FT misc_feature 1205985..1207400 FT /colour=9 FT /note="Pfam match to entry aldedh PF00171, Aldehyde FT dehydro genases" FT misc_feature 1206711..1206734 FT /colour=8 FT /note="PS00687 Aldehyde dehydrogenases glutamic acid FT active site" FT misc_feature 1206795..1206830 FT /colour=8 FT /note="PS00070 Aldehyde dehydrogenases cysteine active FT site" FT tRNA complement(1207647..1207719) FT /note="tRNA Val anticodon TAC, Cove score 76.36" FT LTR 1208047..1208403 FT /note="Tf1-type LTR" FT CDS join(1208563..1208725,1209063..1211989) FT /colour=7 FT /gene="SPCC550.11" FT /label=SPCC550.11 FT /note="SPCC550.11, len:1029, SIMILARITY:Xenopus laevis, FT O42480, member of RanBP7/importin-beta/Cse1p family of FT RanGTP-binding proteins, ranbp7., (1038 aa), fasta scores: FT opt: 1101, E():0, (28.9% identity in 1040 aa)" FT /product="putative RanBP7/importin-beta/Cse1p family FT RanGTP-binding protein" FT /fasta_file="fasta/c550.tab.seq.04599.out" FT misc_feature 1208726..1208731 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT intron 1208726..1209062 FT /colour=2 FT /note="confirmed intron" FT misc_feature 1209044..1209062 FT /colour=6 FT /note="ctaacattattgaatttag, splice branch and acceptor" FT CDS join(1212908..1212987,1213059..1213173,1213246..1214256) FT /colour=7 FT /gene="SPCC550.12" FT /label=SPCC550.12 FT /note="SPCC550.12, len:401, SIMILARITY:Drosophila FT melanogaster, ACTU_DROME, actin-like protein 13e., (398 FT aa), fasta scores: opt: 953, E():0, (36.9% identity in 396 FT aa)" FT /product="actin-like protein" FT /fasta_file="fasta/c550.tab.seq.04600.out" FT misc_feature 1212988..1212993 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 1213042..1213058 FT /colour=6 FT /note="ctaacgatagtttttag, splice branch and acceptor" FT misc_feature 1213174..1213179 FT /colour=6 FT /note="gtacag, splice donor sequence" FT misc_feature 1213233..1213245 FT /colour=6 FT /note="ctaatactagtag, splice branch and acceptor" FT misc_feature 1213525..1213806 FT /note="Match to PF00022 actin, Actin Score 42.93" FT misc_feature 1213864..1214244 FT /note="Match to PF00022 actin, Actin Score 61.01" FT CDS 1215346..1216983 FT /colour=2 FT /gene="dfp1" FT /gene="rad35" FT /gene="him1" FT /gene="SPCC550.13" FT /label=dfp1 FT /note="SPCC550.13, len:545aa" FT /product="essential; regulatory subunit of the Hsk1p-Dfp1p FT kinase; involved in G1/S phase transition; similar to S. FT cerevisiae DBF4" FT /fasta_file="fasta/c550.tab.seq.04601.out" FT CDS 1218078..1221917 FT /colour=7 FT /gene="SPCC550.14" FT /label=SPCC550.14 FT /note="SPCC550.14, len:1279, SIMILARITY:Drosophila FT melanogaster, AAD34755, hypothetical 100.5 kD protein., FT (897 aa), fasta scores: opt: 333, E():6.2e-12, (24.6% FT identity in 760 aa)" FT /product="RNA-binding protein; KH domain; possibly FT involved in control of mitotic chromosome transmission; FT similar to S. cerevisiae CSP160" FT /fasta_file="fasta/c550.tab.seq.04602.out" FT misc_feature 1218783..1218917 FT /colour=9 FT /note="Pfam match to entry PF00013 KH-domain, KH domain, FT score 17.70, E-value 0.00067" FT misc_feature 1219107..1219142 FT /colour=9 FT /note="Pfam match to entry PF00013 KH-domain, KH domain, FT score 1.40, E-value 74" FT misc_feature 1219308..1219439 FT /colour=9 FT /note="Pfam match to entry PF00013 KH-domain, KH domain, FT score 6.10, E-value 2.6" FT misc_feature 1219776..1219925 FT /colour=9 FT /note="Pfam match to entry PF00013 KH-domain, KH domain, FT score 18.00, E-value 0.00054" FT misc_feature 1220025..1220183 FT /colour=9 FT /note="Pfam match to entry PF00013 KH-domain, KH domain, FT score 14.60, E-value 0.0061" FT misc_feature 1220274..1220429 FT /colour=9 FT /note="Pfam match to entry PF00013 KH-domain, KH domain, FT score 22.20, E-value 2.9e-05" FT misc_feature 1220475..1220603 FT /colour=9 FT /note="Pfam match to entry PF00013 KH-domain, KH domain, FT score 27.20, E-value 7.8e-07" FT misc_feature 1220733..1220918 FT /colour=9 FT /note="Pfam match to entry PF00013 KH-domain, KH domain, FT score 26.60, E-value 1.2e-06" FT misc_feature 1220952..1221017 FT /colour=9 FT /note="Pfam match to entry PF00013 KH-domain, KH domain, FT score 6.10, E-value 2.6" FT misc_feature 1221201..1221341 FT /colour=9 FT /note="Pfam match to entry PF00013 KH-domain, KH domain, FT score 20.00, E-value 0.00014" FT misc_feature 1221708..1221845 FT /colour=9 FT /note="Pfam match to entry PF00013 KH-domain, KH domain, FT score 29.20, E-value 1.9e-07" FT CDS complement(1222516..1223907) FT /colour=7 FT /gene="SPCC550.15c" FT /label=SPCC550.15c FT /note="SPCC550.15c, len:463, SIMILARITY:Saccharomyces FT cerevisiae, Q06709, chromosome xii cosmid l3502, (432 aa), FT fasta scores: opt: 418, E():1.7e-18, (30.0% identity in FT 477 aa)" FT /product="zinc finger protein; zf-C2H2 type; similar to S. FT cerevisiae YLR387C; possibly involved in proteasome FT function by similarity to S. cerevisiae YLR387C" FT /fasta_file="fasta/c550.tab.seq.04603.out" FT misc_feature complement(1223059..1223127) FT /colour=9 FT /note="Pfam match to entry zf-C2H2 PF00096, zinc finger, FT C2 H2 type" FT misc_feature complement(1223215..1223280) FT /colour=9 FT /note="Pfam match to entry zf-C2H2 PF00096, zinc finger, FT C2 H2 type" FT misc_feature complement(1223626..1223694) FT /colour=9 FT /note="Pfam match to entry zf-C2H2 PF00096, zinc finger, FT C2 H2 type" FT misc_feature complement(1223821..1223889) FT /colour=8 FT /note="PS00028 zinc finger, C2H2 type" FT misc_feature 1224771..1224869 FT /note="nominal overlap with cosmid SPCC4E9, EM:AL121720 S. FT pombe chromosome 3" FT misc_feature 1224771..1224869 FT /note="nominal overlap with cosmid SPCC550, EM:AL023592 S. FT pombe chromosome 3" FT misc_feature complement(1224901..1224914) FT /colour=6 FT /note="ctaactataagcag, splice branch and acceptor" FT misc_feature complement(1224982..1224987) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1225274..1225286) FT /colour=6 FT /note="ctaactttacaag, splice branch and acceptor" FT misc_feature complement(1225311..1225316) FT /colour=6 FT /note="gtaagg, splice donor sequence" FT misc_feature complement(1225733..1225744) FT /colour=6 FT /note="ctaaacctctag, splice branch and acceptor" FT misc_feature complement(1225764..1225769) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1226553..1226568) FT /colour=6 FT /note="ctaactgaacgtatag, splice branch and acceptor" FT misc_feature complement(1226604..1226609) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1226755..1226770) FT /colour=6 FT /note="ctaacctttttactag, splice branch and acceptor" FT misc_feature complement(1226793..1226798) FT /colour=6 FT /note="gttggc, splice donor sequence" FT misc_feature complement(1227149..1227168) FT /colour=6 FT /note="cttaccatacatatcgctag, splice branch and acceptor" FT misc_feature complement(1227192..1227197) FT /colour=6 FT /note="gtgtgt, splice donor sequence" FT misc_feature complement(1227297..1227307) FT /colour=6 FT /note="ctaattcatag, splice branch and acceptor" FT misc_feature complement(1227376..1227381) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1227495..1227513) FT /colour=6 FT /note="ctaacaagcatacgaaaag, splice branch and acceptor" FT misc_feature complement(1227555..1227560) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1228335..1229375 FT /note="nominal overlap with cosmid SPCC645, EM:AL049498 S. FT pombe chromosome 3" FT misc_feature 1228883..1229374 FT /colour=9 FT /note="Pfam match to entry PF00134 cyclin, Cyclin," FT misc_feature 1228335..1229375 FT /note="nominall overlap with cosmid SPCC4E9, EM:AL121720 FT S. pombe chromosome 3" FT misc_feature 1228883..1229656 FT /colour=9 FT /note="Pfam match to entry PF00134 cyclin, Cyclins" FT CDS 1230624..1231190 FT /colour=10 FT /gene="SPCC645.02" FT /label=SPCC645.02 FT /note="SPCC645.02, len:188, SIMILARITY:Saccharomyces FT cerevisiae, YHQ0_YEAST, hypothetical 20.9 kD protein in FT hxt5-nrk1 intergenic region., (185 aa), fasta scores: opt: FT 346, E():3.9e-17, (33.0% identity in 188 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YHR100C" FT /fasta_file="fasta/c645.tab.seq.04960.out" FT CDS complement(join(1231942..1232259,1232348..1232602)) FT /colour=7 FT /gene="SPCC645.03c" FT /label=SPCC645.03c FT /note="SPCC645.03c, len:190, SIMILARITY:Saccharomyces FT cerevisiae, YL27_YEAST, hypothetical 27.7 kD protein in FT prp19-hsp104 intergenic region., (250 aa), fasta scores: FT opt: 419, E():1.1e-20, (37.6% identity in 157 aa); FT SIMILARITY: Azotobacter vinelandii, TR:O31271, ISCA. FT hypothetical proteininvolved in FeS cluster assembly; FT similar to Azotobacter vinelandii nif gene cluster Orf6 FT protein, (107 aa), fasta scores, opt: 271, E(): 2.5e-11, FT (34.3% identity in 105 aa overlap)" FT /product=" HesB-like domain; putative protein required for FT iron metabolism by similar to S. cerevisiae isa1; FT mitochondrial" FT /fasta_file="fasta/c645.tab.seq.04961.out" FT misc_feature complement(1231957..1232010) FT /colour=8 FT /note="PS01152 Hypothetical hesB/yadR/yfhF family FT signature" FT misc_feature complement(1232260..1232276) FT /colour=6 FT /note="ttaactagtttctttag, splice branch and acceptor" FT intron complement(1232260..1232347) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(1232342..1232347) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT CDS 1233085..1234071 FT /colour=10 FT /gene="SPCC645.04" FT /label=SPCC645.04 FT /note="SPCC645.04, len:328" FT /product="similar to necdin, an embryonal carcinoma- FT derived nuclear protein in mouse; no apparent S. FT cerevisiae ortholog" FT /fasta_file="fasta/c645.tab.seq.04962.out" FT CDS complement(1234350..1238930) FT /colour=2 FT /gene="myo2" FT /gene="SPCC645.05c" FT /label=myo2 FT /note="SPCC645.05c, len:1526" FT /product="myosin II; type II myosin; IQ domain" FT /fasta_file="fasta/c645.tab.seq.04963.out" FT misc_feature complement(1236594..1236662) FT /colour=9 FT /note="Pfam match to entry PF00612 IQ, IQ calmodulin- FT binding motif" FT misc_feature complement(1236702..1238696) FT /colour=9 FT /note="Pfam match to entry PF00063 myosin_head, Myosin FT head (motor domain)" FT misc_feature complement(1238400..1238423) FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS complement(1240285..1244112) FT /colour=7 FT /gene="SPCC645.06c" FT /label=SPCC645.06c FT /note="SPCC645.06c, len:1275, SIMILARITY:Saccharomyces FT cerevisiae, ROM1_YEAST, rho1 gdp-GTP exchange protein 1, FT (1155 aa), fasta scores: opt: 448, E():1.6e-17, (22.1% FT identity in 1296 aa)" FT /product="hypothetical rho1 gdp-GTP exchange protein" FT /fasta_file="fasta/c645.tab.seq.04964.out" FT misc_feature complement(1242154..1242708) FT /colour=9 FT /note="Pfam match to entry PF00621 RhoGEF, RhoGEF domain" FT misc_feature complement(1243246..1243332) FT /colour=8 FT /note="PS00061 Short-chain dehydrogenases/reductases FT family signature" FT CDS join(1246163..1248844,1248891..1250213) FT /colour=7 FT /gene="SPCC645.07" FT /label=SPCC645.07 FT /note="SPCC645.07, len:1334, FT SIMILARITY:Schizosaccharomyces pombe, CAB60236, putative FT rho1 gdp-GTP exchange protein, SPAC1006.06, (1158 aa), FT fasta scores: opt: 2652, E():0, (44.1% identity in 1134 FT aa)" FT /product="RhoGEF domain; PH domain" FT /fasta_file="fasta/c645.tab.seq.04965.out" FT misc_feature 1247432..1247659 FT /colour=9 FT /note="Pfam match to entry PF00610 DEP, Domain found in FT Dishevelled, Egl-10, and Pleckstrin" FT misc_feature 1248035..1248583 FT /colour=9 FT /note="Pfam match to entry PF00621 RhoGEF, RhoGEF domain" FT misc_feature 1248845..1248850 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1248878..1248890 FT /colour=6 FT /note="ctaactagtatag, splice branch and acceptor" FT misc_feature 1249191..1250081 FT /note="Match to PF00780 CNH, CNH domain Score 115.66" FT CDS complement(1250457..1253093) FT /colour=7 FT /gene="SPCC645.08c" FT /label=SPCC645.08c FT /note="SPCC645.08c, len:878, SIMILARITY:Ajellomyces FT capsulatus., O60040, 100 kDa protein., (890 aa), fasta FT scores: opt: 1331, E():0, (36.3% identity in 848 aa), FT SIMILARITY: H sapiens Q13122 100 kDA COACTIVATOR, FT (nuclear protein 2 acidic domain forms a complex with a FT novel cellular coactivator that can interact with TFIIE), FT (885 aa), fasta scores, opt:926, E():0, (32.6% identity in FT 866 aa overlap)" FT /product="putative RNA-binding protein; p100 co-activator FT ortholog; putative TFIIE-interacting; no apparent S. FT cerevisiae ortholog" FT /fasta_file="fasta/c645.tab.seq.04966.out" FT tRNA 1254093..1254187 FT /note="tRNA Ser anticodon GCT, Cove score 74.09" FT intron 1254132..1254142 FT /note="intron tRNA Ser anticodon GCT" FT CDS 1255445..1255864 FT /colour=7 FT /gene="SPCC645.09" FT /label=SPCC645.09 FT /note="SPCC645.09, len:139, putative transit peptide 1-59 FT aa, SIMILARITY:Saccharomyces cerevisiae, P36532, 60S FT ribosomal L37 protein, mitochondrial, (105 aa), fasta FT scores: opt: 130, E():0.015, (42.9% identity in 70 aa)" FT /product="mitochondrial ribosomal protein L37" FT /fasta_file="fasta/c645.tab.seq.04967.out" FT CDS join(1256180..1257490,1257550..1257693) FT /EC_number="2.7.7.25" FT /colour=7 FT /gene="SPCC645.10" FT /label=SPCC645.10 FT /note="SPCC645.10, len:484, SIMILARITY:Saccharomyces FT cerevisiae, CCA1_YEAST, tRNA nucleotidyltransferase , (546 FT aa), fasta scores: opt: 788, E():0, (36.8% identity in 516 FT aa)" FT /product="putative tRNA nucleotidyltransferase" FT /fasta_file="fasta/c645.tab.seq.04968.out" FT misc_feature 1257491..1257496 FT /note="gtatgt, splice donor sequence" FT misc_feature 1257535..1257549 FT /note="ctaacaattttttag, splice branch and acceptor" FT CDS complement(1257833..1258393) FT /colour=8 FT /gene="SPCC645.11c" FT /label=SPCC645.11c FT /note="SPCC645.11c, len:196, possibly spliced to FT SPCC645.12c" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c645.tab.seq.04969.out" FT CDS complement(1258576..1259172) FT /colour=8 FT /gene="SPCC645.12c" FT /label=SPCC645.12c FT /note="SPCC645.12c, len:196, possibly spliced to FT SPCC645.11c" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c645.tab.seq.04970.out" FT CDS 1259534..1261699 FT /colour=10 FT /gene="SPCC645.13" FT /label=SPCC645.13 FT /note="SPCC645.13, len:721, SIMILARITY:Homo sapiens, FT O15043, kiaa0333, (991 aa), fasta scores: opt: 263, FT E():1.6e-07, (27.1% identity in 328 aa)" FT /product="zinc finger protein; zf-PHD finger" FT /fasta_file="fasta/c645.tab.seq.04971.out" FT misc_feature 1259591..1259740 FT /note="Pfam match to entry PF00628 PHD, PHD-finger" FT CDS complement(1262506..1264281) FT /colour=2 FT /gene="sti1" FT /gene="SPCC645.14c" FT /label=sti1 FT /note="SPCC645.14c, len:591" FT /product="activator of Hsp70 and Hsp90 chaperones" FT /fasta_file="fasta/c645.tab.seq.04972.out" FT misc_feature complement(1264186..1264257) FT /note="Match to PF00515 TPR, TPR Domain Score 21.83" FT misc_feature 1264967..1265070 FT /note="nominal overlap with cosmid SPCC645, EM:AL049498 S. FT pombe chromosome 3" FT CDS complement(join(1265630..1266905,1267240..1267317, FT 1267412..1267443,1267571..1267654)) FT /colour=7 FT /gene="SPCC23B6.01c" FT /label=SPCC23B6.01c FT /note="SPCC23B6.01c, len:489, SIMILARITY:Neurospora crassa, FT P87046, oxysterol-binding protein, (360 aa), fasta FT scores: opt: 1240, E():0, (53.7% identity in 348 aa)" FT /product="oxysterol-binding protein family" FT /fasta_file="fasta/c23B6.tab.seq.05245.out" FT misc_feature complement(join(1265867..1266905,1267240..1267317, FT 1267412..1267443)) FT /note="Match to PF01237 Oxysterol_BP, Oxysterol-binding FT protein Score 315.64" FT misc_feature complement(1266906..1266926) FT /colour=6 FT /note="ctaacctcttgaaaattctag, splice branch and acceptor" FT misc_feature complement(1267234..1267239) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(1267318..1267335) FT /colour=6 FT /note="ttgaccacatgttcgcag, splice branch and acceptor" FT misc_feature complement(1267406..1267411) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(1267444..1267462) FT /colour=6 FT /note="ttaacgaatttttatttag, splice branch and acceptor" FT misc_feature complement(1267565..1267570) FT /colour=6 FT /note="gtaggt, splice donor sequence" FT CDS complement(join(1268969..1269072,1269149..1269464)) FT /colour=8 FT /gene="SPCC23B6.02c" FT /label=SPCC23B6.02c FT /note="SPCC23B6.02c, len:139," FT /product="hypothetical lysine-rich protein; sequence FT orphan" FT /fasta_file="fasta/c23B6.tab.seq.05246.out" FT misc_feature complement(1269073..1269092) FT /colour=6 FT /note="ctaacggatcaccaacttag, splice branch and acceptor" FT misc_feature complement(1269143..1269148) FT /colour=6 FT /note="gtaagg, splice donor sequence" FT CDS complement(1269897..1278335) FT /colour=2 FT /gene="tel1" FT /gene="SPCC23B6.03c" FT /label=tel1 FT /note="SPCC23B6.03c, len:2812" FT /product="phosphotidylinositol kinase, tel1p; telomere FT length control; similar to S. cerevisiae TEL1" FT /fasta_file="fasta/c23B6.tab.seq.05247.out" FT misc_feature complement(1270239..1270556) FT /note="Match to PF00454 PI3_PI4_kinase, FT Phosphatidylinositol 3- and 4-kinases Score 145.16" FT misc_feature complement(1270731..1270883) FT /note="Match to PF00454 PI3_PI4_kinase, FT Phosphatidylinositol 3- and 4-kinases Score 28.48" FT CDS complement(1278773..1281799) FT /colour=7 FT /gene="SPCC23B6.04c" FT /label=SPCC23B6.04c FT /note="SPCC23B6.04c, len:1008, SIMILARITY at C- FT term:Saccharomyces cerevisiae, YNX1_YEAST, hypothetical FT 40.7 kD protein in sin4-ure2 intergenic FT region.hypothetical 40.7 kD protein in bni4-ure2 FT intergenic region., (351 aa), fasta scores: opt: 780, FT E():3.3e-32, (49.2% identity in 325 aa)" FT /product="conserved CRAL/TRIO domain protein; SEC14 FT cytosolic factor family; possibly involved in lipid FT movement between membranes by similar to S. cerevisiae FT pdr16" FT /fasta_file="fasta/c23B6.tab.seq.05248.out" FT misc_feature complement(1279331..1279816) FT /note="Match to PF00650 CRAL_TRIO, CRAL/TRIO domain. Score FT 140.13" FT CDS complement(join(1282786..1282850,1282952..1283054, FT 1283118..1283264)) FT /colour=2 FT /gene="ssb3" FT /gene="rpa3" FT /gene="SPCC23B6.05c" FT /label=ssb3 FT /note="SPCC23B6.05c , len:104" FT /product="replication factor-a protein 3; similar to S. FT cerevisiae RPA3" FT /fasta_file="fasta/c23B6.tab.seq.00009.out" FT misc_feature complement(1282851..1282870) FT /colour=6 FT /note="ctaatttcctgttcctttag, splice branch and acceptor" FT misc_feature complement(1282946..1282951) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1283055..1283064) FT /colour=6 FT /note="ctaattttag, splice branch and acceptor" FT misc_feature complement(1283112..1283117) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature 1285974..1286076 FT /note="nominal overlap with cosmid SPCC1322, EM:AL035259 FT S. pombe chromosome 3" FT misc_feature 1285974..1286076 FT /note="nominal overlap with cosmid SPCC23B6, EM:AL109608 FT S. pombe chromosome 3" FT CDS 1287250..1288305 FT /colour=8 FT /gene="SPCC1322.02" FT /label=SPCC1322.02 FT /note="SPCC1322.02, len:351" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1322.tab.seq.05093.out" FT CDS 1289037..1291625 FT /colour=10 FT /gene="SPCC1322.03" FT /label=SPCC1322.03 FT /note="SPCC1322.03, len:862, SIMILARITY to C-term FT of:Saccha romyces cerevisiae, YAF3_YEAST, putative FT integral membrane protein, (783 aa), fasta scores: opt: FT 280, E():3.3e-09, (25 .2% identity in 420 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YAL053W; contains 11 predicted transmembrane helices" FT /fasta_file="fasta/c1322.tab.seq.05094.out" FT CDS 1293078..1294598 FT /EC_number="2.7.7.9" FT /colour=7 FT /gene="SPCC1322.04" FT /label=SPCC1322.04 FT /note="SPCC1322.04, len:506, SIMILARITY:Saccharomyces FT cerevisiae, UDPG_YEAST, putative utp--glucose-1-phosphate FT uridylyltransferase, (499 aa), fasta scores: opt: 2166, FT E():0, (63.9% identity in 498 aa)" FT /product="putative utp--glucose-1-phosphate FT uridylyltransferase; similar to S. cerevisiae UGP1" FT /fasta_file="fasta/c1322.tab.seq.05095.out" FT misc_feature 1293234..1294499 FT /note="Match to PF01704 UDPGP, UTP--glucose-1-phosphate FT uridylyltransferase Score 910.97" FT CDS complement(1294976..1296814) FT /EC_number="3.3.2.6" FT /colour=7 FT /gene="SPCC1322.05c" FT /label=SPCC1322.05c FT /note="SPCC1322.05c, len:612, SIMILARITY:Saccharomyces FT cerevisiae, LKHA_YEAST, putative leukotriene a-4 hydrolase, FT (671 aa), fasta scores: opt: 1595, E():0, (46.7% FT identity in 625 aa)" FT /product="putative leukotriene A-4 hydrolase; similar to FT S. cerevisiae YNL045W" FT /fasta_file="fasta/c1322.tab.seq.05096.out" FT misc_feature complement(1295660..1296739) FT /note="Match to PF01433 Peptidase_M1, Peptidase family M1 FT Score 83.39" FT misc_feature complement(1295900..1295947) FT /colour=9 FT /note="Pfam match to entry PF00099 zn-protease, zinc- FT bindin g metalloprotease domain" FT LTR complement(1297237..1297566) FT /colour=4 FT /note="putative degraded LTR" FT CDS join(1297858..1298084,1298162..1299194,1299251..1299940, FT 1299991..1300830,1300925..1301086) FT /colour=7 FT /gene="SPCC1322.06" FT /label=SPCC1322.06 FT /note="SPCC1322.06, len:983, SIMILARITY:Saccharomyces FT cerevisiae, Q02932, lph2p., (1032 aa), fasta scores: opt: FT 940, E():0, (26.9% identity in 1018 aa)" FT /product="putative karyopherin; importin-beta family; FT similar to human RAN binding protein 11; similar to S. FT cerevisiae KAP120" FT /fasta_file="fasta/c1322.tab.seq.05097.out" FT misc_feature 1298085..1298090 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1298140..1298161 FT /colour=6 FT /note="ctaatgtatgattgtttggcag, splice branch and acceptor" FT misc_feature 1299195..1299200 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1299236..1299250 FT /colour=6 FT /note="ttaacgataatatag, splice branch and acceptor" FT misc_feature 1299941..1299946 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1299980..1299990 FT /colour=6 FT /note="ctaatttctag, splice branch and acceptor" FT misc_feature 1300831..1300836 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1300909..1300924 FT /colour=6 FT /note="ctaacttttattttag, splice branch and acceptor" FT CDS complement(1301540..1301854) FT /colour=8 FT /gene="SPCC1322.07c" FT /label=SPCC1322.07c FT /note="SPCC1322.07c, len:104" FT /product="hypothetical protein; sequence orphan; has FT transcript profile on microarray" FT /fasta_file="fasta/c1322.tab.seq.05098.out" FT CDS join(1303800..1303811,1304035..1305765) FT /colour=7 FT /gene="SPCC1322.08" FT /label=SPCC1322.08 FT /note="SPCC1322.08, len:580, FT SIMILARITY:Schizosaccharomyces pombe, O42844, FT serine/threonine-protein kinase, (504 aa), fasta scores: FT opt: 1231, E():0, (44.3% identity in 515 aa)" FT /product="putative serine/threonine protein kinase" FT /fasta_file="fasta/c1322.tab.seq.05099.out" FT misc_feature 1303812..1303817 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1304017..1304034 FT /colour=6 FT /note="ctaatttaatttatttag, splice branch and acceptor" FT misc_feature 1304392..1305285 FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain Score 313.90" FT misc_feature 1304779..1304817 FT /colour=8 FT /note="PS00108 Serine/Threonine protein kinases active- FT site signature" FT CDS join(1307094..1307637,1307696..1307874,1308029..1308673) FT /colour=8 FT /gene="SPCC1322.09" FT /label=SPCC1322.09 FT /note="SPCC1322.09, len:475" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1322.tab.seq.05100.out" FT misc_feature 1307638..1307643 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1307678..1307695 FT /colour=6 FT /note="ctaacaaatgtcttttag, splice branch and acceptor" FT misc_feature 1307875..1307880 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1308014..1308028 FT /colour=6 FT /note="ctgacatgttaccag, splice branch and acceptor" FT CDS 1310680..1311468 FT /colour=8 FT /gene="SPCC1322.10" FT /label=SPCC1322.10 FT /note="SPCC1322.10, len:262, FT SIMILARITY:Schizosaccharomyces pombe, O74947, hypothetical FT 35.9 kD protein, (349 aa), fas ta scores: opt: 383, FT E():7.8e-12, (38.1% identity in 223 aa )" FT /product="hypothetical protein; sequence orphan; serine- FT rich protein; similar to cell-surface proteins; similar to FT proteoglycans" FT /fasta_file="fasta/c1322.tab.seq.05101.out" FT CDS join(1312552..1312723,1312989..1313236) FT /colour=2 FT /gene="rpl23-2" FT /gene="SPCC1322.11" FT /label=rpl23-2 FT /note="SPCC1322.11, len:139" FT /product="60S ribosomal protein L23" FT /fasta_file="fasta/c1322.tab.seq.05102.out" FT misc_feature join(1312603..1312723,1312989..1313233) FT /note="Match to PF00238 Ribosomal_L14, Ribosomal protein FT L14 Score 173.80" FT misc_feature 1312724..1312729 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT intron 1312724..1312988 FT /colour=2 FT /note="confirmed intron" FT misc_feature 1312971..1312988 FT /colour=6 FT /note="ctaacgaaatttttttag, splice branch and acceptor" FT misc_feature 1313048..1313128 FT /colour=8 FT /note="PS00049 Ribosomal protein L14 signature" FT CDS complement(1313698..1316832) FT /colour=2 FT /gene="bub1" FT /gene="SPCC1322.12c" FT /label=bub1 FT /note="SPCC1322.12c, len:1044" FT /product="spindle checkpoint protein kinase; essential; FT mitotic centromere protein; required for preservation of FT correct ploidy through mitosis; serine/threonine protein FT kinase; similar to S. cerevisiae BUB1" FT /fasta_file="fasta/c1322.tab.seq.05103.out" FT misc_feature complement(1314235..1314420) FT /colour=9 FT /note="Pfam match to entry PF00069 pkinase, Eukaryotic FT protein kinase domain" FT misc_feature complement(1314625..1314681) FT /colour=9 FT /note="Pfam match to entry PF00069 pkinase, Eukaryotic FT protein kinase domain" FT CDS 1317237..1318895 FT /EC_number="4.1.1.21" FT /colour=2 FT /gene="ade6" FT /gene="min1" FT /gene="SPCC1322.13" FT /label=ade6 FT /note="SPCC1322.13, len:552" FT /product="phosphoribosylaminoimidazole carboxylase; AIR FT carboxylase; purine biosynthetic pathway; similar to S. FT cerevisiae ADE2" FT /fasta_file="fasta/c1322.tab.seq.05104.out" FT misc_feature 1318395..1318838 FT /colour=9 FT /note="Pfam match to entry PF00731 AIRC, AIR carboxylase" FT misc_feature 1318398..1318838 FT /note="Match to PF00731 AIRC, AIR carboxylase Score 353.09" FT CDS complement(1319325..1321490) FT /colour=7 FT /gene="SPCC1322.14c" FT /label=SPCC1322.14c FT /note="SPCC1322.14c, len:721, SIMILARITY:Saccharomyces FT cerevisiae, YJB2_YEAST, hypothetical 75.5 kD protein in FT cct3-cct8 intergenic region., (648 aa), fasta scores: opt: FT 2272, E():0, (60.3% identity in 580 aa)" FT /product="putative polyphosphate synthetase; similar to S. FT cerevisiae VTC4" FT /fasta_file="fasta/c1322.tab.seq.05105.out" FT CDS 1322487..1322822 FT /colour=2 FT /gene="rpl34-2" FT /gene="SPCC1322.15" FT /label=rpl34-2 FT /note="SPCC1322.15, len:111" FT /product="60S ribosomal protein L34" FT /fasta_file="fasta/c1322.tab.seq.05106.out" FT misc_feature 1322499..1322789 FT /note="Match to PF01199 Ribosomal_L34e, Ribosomal protein FT L34e Score 200.03" FT CDS join(1324771..1325047,1325255..1325521,1325578..1325646, FT 1325696..1325922) FT /colour=7 FT /gene="SPCC1322.16" FT /label=SPCC1322.16 FT /note="SPCC1322.16, len:279, may use Met at upstream MNRQ, FT SIMILARITY:Saccharomyces cerevisiae, YG4W_YEAST, FT prohibitin, antiproliferative protein, (315 aa), fasta FT scores: opt: 1227, E():0, (68.9% identity in 273 aa)" FT /product="putative prohibitin; similar to S. cerevisiae FT PHB2" FT /fasta_file="fasta/c1322.tab.seq.05107.out" FT misc_feature join(1324831..1325047,1325255..1325521,1325578..1325642) FT /note="Match to PF01145 Band_7, Band 7 family Score 141.16" FT misc_feature 1325048..1325053 FT /colour=6 FT /note="gtaggt, splice donor sequence" FT intron 1325048..1325254 FT /note="confirmed by mRNA" FT misc_feature 1325237..1325254 FT /colour=6 FT /note="ttaaccatttttctttag, splice branch and acceptor" FT misc_feature 1325522..1325527 FT /colour=6 FT /note="gtatga, splice donor sequence" FT intron 1325522..1325577 FT /note="confirmed by mRNA" FT misc_feature 1325561..1325577 FT /colour=6 FT /note="ctaactgcatccaatag, splice branch and acceptor" FT misc_feature 1325647..1325652 FT /colour=6 FT /note="gtatgg, splice donor sequence" FT intron 1325647..1325695 FT /colour=2 FT /note="confirmed intron" FT misc_feature 1325678..1325695 FT /colour=6 FT /note="ttaacaataattttttag, splice branch and acceptor" FT misc_feature 1327515..1328043 FT /note="nominal overlap with cosmid SPCC132, EM:AL121807 S. FT pombe chromosome 3" FT misc_feature 1327515..1328043 FT /note="nominal overlap with cosmid SPCC1322, EM:AL035259 FT S.pombe chromosome 3" FT misc_feature complement(1329031..1329044) FT /colour=6 FT /note="ctaacccgttaaag, splice branch and acceptor" FT misc_feature complement(1329070..1329075) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS join(1329998..1330076,1330134..1330510,1330578..1331120) FT /colour=7 FT /gene="SPCC132.02" FT /label=SPCC132.02 FT /note="SPCC132.02, len:332, SIMILARITY:Candida albicans, FT O94066, transcription regulatory protein., (331 aa), fasta FT scores: opt: 966, E():0, (47.3% identity in 315 aa)" FT /product="putative SIR2-like transcriptional regulatory FT protein; possibly involved in chromatin silencing; similar FT to S. cerevisiae HST2" FT /fasta_file="fasta/c132.tab.seq.05319.out" FT misc_feature 1330077..1330082 FT /colour=6 FT /note="gtaatg, splice donor sequence" FT misc_feature 1330110..1330133 FT /colour=6 FT /note="ctaatgcgattttatcgaaaatag, splice branch and FT acceptor" FT misc_feature 1330511..1330516 FT /colour=6 FT /note="gtaagg, splice donor sequence" FT misc_feature 1330562..1330577 FT /colour=6 FT /note="ctgacggaaaacaaag, splice branch and acceptor" FT CDS join(1332455..1332691,1332886..1333109,1333176..1333245) FT /colour=8 FT /gene="SPCC132.03" FT /label=SPCC132.03 FT /note="SPCC132.03, len:176 - questionable ORF" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c132.tab.seq.05320.out" FT misc_feature 1332692..1332697 FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature 1332865..1332885 FT /colour=6 FT /note="ctaatcaactatttctgttag, splice branch and acceptor" FT misc_feature 1333110..1333115 FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature 1333164..1333175 FT /colour=6 FT /note="ttaacattttag, splice branch and acceptor" FT CDS complement(1333664..1336984) FT /colour=7 FT /gene="SPCC132.04c" FT /label=SPCC132.04c FT /note="SPCC132.04c, len:1106, SIMILARITY:Agaricus bisporus, FT CAB40797, nad-specific glutamate dehydrogenase., (1029 FT aa), fasta scores: opt: 2854, E():0, (46.6% identity in FT 1044 aa)" FT /product="nad-specific glutamate dehydrogenase" FT /fasta_file="fasta/c132.tab.seq.05321.out" FT misc_feature complement(1333997..1335355) FT /note="Match to PF00208 GLFV_dehydrog, FT Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Score FT 442.07" FT misc_feature complement(1335899..1336075) FT /note="Match to PF00208 GLFV_dehydrog, FT Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Score FT 32.12" FT misc_feature complement(join(1339631..1340173,1340177..1340503, FT 1340507..1340517)) FT /note="SPCC132.05c, len:292, Pseudogene, FT SIMILARITY:Fusarium sporotrichioides., O94197, FT trichothecene 3-o-acetyltransferase., (459 aa), fasta FT scores: opt: 787, E():0, (44.9% identity in 296 aa)" FT misc_feature complement(1339969..1340517) FT /note="nominal overlap with cosmid SPCC338, EM:AL023781 FT S.pombe chromosome 3" FT misc_feature 1339969..1340517 FT /note="nominal overlap with cosmid SPCC132, EM:AL121807 S. FT pombe chromosome 3" FT CDS complement(1342169..1342522) FT /colour=8 FT /gene="SPCC338.18" FT /label=SPCC338.18 FT /note="SPCC338.18, len:117, SIMILARITY:Caenorhabditis FT elegans., O44789, d1069.1 protein., (311 aa), fasta FT scores: opt: 113, E():0.49, (30.7% identity in 88 aa)" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c338.tab.seq.04448.out" FT CDS join(1343992..1344024,1344105..1345958) FT /colour=2 FT /gene="rad21" FT /gene="SPCC338.17c" FT /label=rad21 FT /note="SPCC338.17c, len:628" FT /product="cohesin; required for chromosome cohesion; FT required for double-strand-break repair; similar to S. FT cerevisiae MCD1" FT /fasta_file="fasta/c338.tab.seq.04449.out" FT misc_feature 1344025..1344030 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1344088..1344104 FT /colour=6 FT /note="ctaactgttcgcgttag, splice branch and acceptor" FT CDS complement(1346294..1348027) FT /colour=2 FT /gene="pof3" FT /gene="SPCC338.16" FT /label=pof3 FT /note="SPCC338.16, len:577" FT /product="F-box protein" FT /fasta_file="fasta/c338.tab.seq.04450.out" FT misc_feature complement(1347488..1347628) FT /note="Match to PF00646 F-box, F-box domain. Score 36.01" FT CDS complement(join(1348722..1349138,1349269..1349924, FT 1350012..1350122,1350169..1350298)) FT /colour=7 FT /gene="SPCC338.15" FT /label=SPCC338.15 FT /note="SPCC338.15, len:437, SIMILARITY:Mus musculus, FT O54734, dolichyl-di-phosphooligosaccharide-protein FT glycotransferase (oligosaccharyltransferase)., (441 aa), FT fasta scores: opt: 655, E():0, (31.3% identity in 435 aa)" FT /product="putative dolichyl-di-phosphooligosaccharide- FT protein glycotransferase (oligosaccharyltransferase)" FT /fasta_file="fasta/c338.tab.seq.04451.out" FT misc_feature complement(1349139..1349149) FT /colour=6 FT /note="ctaacgtttag, splice branch and acceptor" FT intron complement(1349139..1349268) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(1349263..1349268) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1349925..1349944) FT /colour=6 FT /note="ctaacgcactttatgaatag, splice branch and acceptor" FT misc_feature complement(1350006..1350011) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(1350123..1350140) FT /colour=6 FT /note="ctaactgttactatgtag, splice branch and acceptor" FT misc_feature complement(1350163..1350168) FT /colour=6 FT /note="gtacga, splice donor sequence" FT CDS complement(1350962..1351984) FT /colour=7 FT /gene="SPCC338.14" FT /label=SPCC338.14 FT /note="SPCC338.14, len:351, SIMILARITY:Physcomitrella FT patens, O49923, adenosine kinase, (343 aa), fasta scores: FT opt: 947, E():0, (44.2% identity in 337 aa)" FT /product="putative adenosine kinase" FT /fasta_file="fasta/c338.tab.seq.04452.out" FT misc_feature complement(1351094..1351225) FT /note="Match to PF00294 pfkB, pfkB family carbohydrate FT kinase Score 25.97" FT CDS complement(1352893..1355109) FT /colour=10 FT /gene="SPCC338.13" FT /label=SPCC338.13 FT /note="SPCC338.13, len:738, SIMILARITY:Saccharomyces FT cerevisiae, Q06096, chromosome xvi cosmid 8283., (861 aa), FT fasta scores: opt: 428, E():5.5e-20, (20.9% identity in FT 809 aa)" FT /product="hypothetical protein; yeast homolog YPR105c FT possibly involved in vesicular transport by 2-hybrid data" FT /fasta_file="fasta/c338.tab.seq.04453.out" FT CDS complement(1356176..1356409) FT /colour=8 FT /gene="SPCC338.12" FT /label=SPCC338.12 FT /note="SPCC338.12, len:77, SIMILARITY:Tritirachium album., FT PRTR_TRIAL, proteinase r , (387 aa), fasta scores: opt: FT 165, E():7.7e-05, (39.7% identity in 68 aa)" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c338.tab.seq.00019.out" FT CDS 1357226..1358137 FT /colour=2 FT /gene="uvi22" FT /gene="rrg1" FT /gene="SPCC338.11c" FT /label=uvi22 FT /note="SPCC338.11c, len:303" FT /product="uv-induced protein; rapid response to glucose; FT regulated by glucose (PMID: 11861905); regulated post FT transcriptionally by control of mRNA stability (PMID: FT 11861905)" FT /fasta_file="fasta/c338.tab.seq.04455.out" FT CDS 1358802..1359326 FT /colour=7 FT /gene="cox5" FT /gene="SPCC338.10c" FT /label=cox5 FT /note="SPCC338.10c, len:174, SIMILARITY:Neurospora crassa., FT COX5_NEUCR, cytochrome c oxidase polypeptide v , (171 FT aa), fasta scores: opt: 416, E():1e-21, (42.1% identity FT in 164 aa)" FT /product="putative cytochrome c oxidase subuit V" FT /fasta_file="fasta/c338.tab.seq.04456.out" FT CDS complement(1359862..1360719) FT /colour=8 FT /gene="SPCC338.08" FT /label=SPCC338.08 FT /note="SPCC338.08, len:285" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c338.tab.seq.04457.out" FT misc_feature join(1360113..1360165,1360207..1360504) FT /label=SPCC338.09c FT /note="was SPCC338.09c, very questionable ORF, len:116 aa, FT but now thought to be not coding" FT misc_feature 1360166..1360171 FT /colour=6 FT /note="gtattt, splice donor sequence" FT misc_feature 1360185..1360206 FT /colour=6 FT /note="ctaatggttgtgtttcacgtag, splice branch and acceptor" FT tRNA complement(1361990..1362061) FT /note="tRNA Thr anticodon TGT, Cove score 68.01" FT CDS join(1363528..1363581,1363633..1365768) FT /colour=7 FT /gene="SPCC338.07c" FT /label=SPCC338.07c FT /note="SPCC338.07c, len:729, SIMILARITY:Saccharomyces FT cerevisiae, NAT1_YEAST, n-terminal acetyltransferase 1, FT (853 aa), fasta scores: opt: 528, E():3e-25, (33.2% FT identity in 713 aa)" FT /product="putative n-terminal acetyltransferase 1" FT /fasta_file="fasta/c338.tab.seq.04458.out" FT misc_feature 1363582..1363587 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1363621..1363632 FT /colour=6 FT /note="ctaaccctgtag, splice branch and acceptor" FT CDS 1366122..1366541 FT /colour=7 FT /gene="SPCC338.06c" FT /label=SPCC338.06c FT /note="SPCC338.06c, len:139, FT SIMILARITY:Schizosaccharomyces pombe, O14368, heat shock FT protein 16., (143 aa), fasta scores: opt: 278, E():4.8e-13, FT (35.3% identity in 139 aa)" FT /product="putative heat shock protein 16 -Hsp20 family" FT /fasta_file="fasta/c338.tab.seq.04459.out" FT misc_feature 1366209..1366538 FT /colour=9 FT /note="Pfam match to entry HSP20 PF00011, Heat shock FT hsp20p roteins" FT misc_feature 1366221..1366538 FT /note="Match to PF00011 HSP20, Hsp20/alpha crystallin FT family Score 78.11" FT CDS join(1367521..1367531,1367579..1367717,1367881..1368006, FT 1368185..1368264,1368314..1368377) FT /colour=2 FT /gene="mms2" FT /gene="spm2" FT /gene="SPCC338.05c" FT /label=mms2 FT /note="SPCC338.05c, len:139, SIMILARITY:Saccharomyces FT italicus, AAC24241, mms2p., (137 aa), fasta scores: opt: FT 630, E():0, (66.7% identity in 138 aa)" FT /product="ubiquitin conjugating enzyme; ubc; deletion FT results in enhanced sensitivity to DNA damaging agents" FT /fasta_file="fasta/c338.tab.seq.04460.out" FT misc_feature 1367524..1367904 FT /colour=9 FT /note="Pfam match to entry PF00179 UQ_con, Ubiquitin- FT conjugating enzyme, score -39.30, E-value 0.0024" FT misc_feature 1367532..1367537 FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature 1367566..1367578 FT /colour=6 FT /note="ctaattttgatag, splice branch and acceptor" FT misc_feature 1367718..1367723 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1367861..1367880 FT /colour=6 FT /note="ctaatttgttattaatttag, splice branch and acceptor" FT misc_feature 1368007..1368012 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1368171..1368184 FT /colour=6 FT /note="ctaacgttaattag, splice branch and acceptor" FT misc_feature 1368265..1368270 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1368298..1368313 FT /colour=6 FT /note="ctaacttatgttttag, splice branch and acceptor" FT CDS complement(join(1368693..1369147,1369207..1369255)) FT /colour=2 FT /gene="cid2" FT /gene="SPCC338.04" FT /label=cid2 FT /note="SPCC338.04, len:167" FT /product="Caffeine-induced death protein Cid2p; similar to FT S. cerevisiae YBL107C" FT /fasta_file="fasta/c338.tab.seq.00020.out" FT misc_feature complement(1369148..1369163) FT /colour=6 FT /note="ctaatcatacttttag, splice branch and acceptor" FT intron complement(1369148..1369206) FT /note="intron confirmed by EST" FT misc_feature complement(1369201..1369206) FT /colour=6 FT /note="gtatgc, splice donor sequence" FT CDS complement(1369782..1370159) FT /colour=8 FT /gene="SPCC338.02" FT /label=SPCC338.02 FT /note="SPCC338.02, len:125" FT /product="hypothetical protein; sequence orphan; has FT transcript profile on microarray" FT /fasta_file="fasta/c338.tab.seq.04462.out" FT misc_feature 1369819..1370241 FT /label=SPCC338.03c FT /note="was previously SPCC338.03c, len:141aa, but now FT thought to be not coding" FT misc_feature complement(1369896..1369919) FT /colour=8 FT /note="PS00881 protein splicing signature" FT rRNA complement(1370874..1371102) FT /gene="5s" FT /note="5s rRNA gene" FT misc_feature 1371102..1375071 FT /note="low complexity gene-free region" FT misc_feature 1375270..1376790 FT /colour=9 FT /note="Pfam match to entry PF00128 alpha-amylase, Alpha FT amylase, score -18.40, E-value 2.2e-06" FT misc_feature 1378540..1378702 FT /note="nominal overlap with cosmid SPCC17A7, EM:AL049472 FT S. pombe chromosome 3" FT misc_feature complement(1378540..1378702) FT /note="nominal overlap with cosmid SPCC338, EM:AL023781 S. FT pombe chromosome 3" FT misc_feature 1379245..1379467 FT /note="nominal overlap with cosmid SPCC1281, EM:AL035218 FT S. pombe chromosome 3" FT misc_feature 1379245..1379467 FT /note="nominal overlap with cosmid SPCC17A7, EM:AL049472 FT S. pombe chromosome 3" FT CDS complement(1383390..1384325) FT /colour=2 FT /gene="spf30" FT /gene="SPCC1281.02c" FT /label=spf30 FT /note="SPCC1281.02c, len:311, SIMILARITY:Homo sapiens, FT O759 40, 30kDa splicing factor., (238 aa), fasta scores: FT opt: 14 8, E():0.23, (31.3% identity in 150 aa)" FT /product="putative spliceosome associated protein; by low FT similarity; possibly involved in pre-mRNA splicing; no FT apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c1281.tab.seq.05139.out" FT CDS complement(1384932..1385513) FT /colour=10 FT /gene="SPCC1281.03c" FT /label=SPCC1281.03c FT /note="SPCC1281.03c, len:193, SIMILARITY:Saccharomyces FT cere visiae, YGY1_YEAST, hypothetical 21.5 kD protein in FT sec15-s ap4 intergenic region., (190 aa), fasta scores: FT opt: 405, E ():3.1e-20, (41.1% identity in 180 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YGL231C" FT /fasta_file="fasta/c1281.tab.seq.05140.out" FT CDS 1387702..1388703 FT /colour=7 FT /gene="SPCC1281.04" FT /label=SPCC1281.04 FT /note="SPCC1281.04, len:333, FT SIMILARITY:Schizosaccharomyces pombe, O14295, hypothetical FT 36.8 kD protein c9e9.11 in chr omosome i., (333 aa), fasta FT scores: opt: 1713, E():0, (74.5 % identity in 333 aa)" FT /product="pyridoxal reductase homolog" FT /fasta_file="fasta/c1281.tab.seq.05141.out" FT CDS 1389698..1390870 FT /colour=7 FT /gene="SPCC1281.05" FT /label=SPCC1281.05 FT /note="SPCC1281.05, len:390, SIMILARITY:Saccharomyces FT cerevisiae, NPL6_YEAST, npl6 protein., (435 aa), fasta FT scores: opt: 607, E():2e-31, (33.7% identity in 359 aa)" FT /product="possibly involved in nuclear protein FT localisation" FT /fasta_file="fasta/c1281.tab.seq.05142.out" FT CDS complement(1393590..1395029) FT /colour=7 FT /gene="SPCC1281.06c" FT /label=SPCC1281.06c FT /note="SPCC1281.06c, len:479, SIMILARITY:Ajellomyces FT capsulata, Q12618, acyl-coa desaturase 1, (476 aa), fasta FT scores: opt: 1816, E():0, (53.8% identity in 472 aa)" FT /product="acyl-coa desaturase 1" FT /fasta_file="fasta/c1281.tab.seq.05143.out" FT misc_feature complement(1394109..1394828) FT /note="Pfam match to entry PF01069 Desaturase, Fatty acid FT desaturase" FT misc_feature complement(1395066..1398488) FT /note="low complexity gene free region" FT CDS complement(1398525..1399466) FT /colour=7 FT /gene="SPCC1281.07c" FT /label=SPCC1281.07c FT /note="SPCC1281.07c, len:313, SIMILARITY:Synechocystis sp., FT P74752, hypothetical 36.5 kD protein., (319 aa), fasta FT sco res: opt: 1019, E():0, (52.3% identity in 306 aa)" FT /product="glutathione S-transferase" FT /fasta_file="fasta/c1281.tab.seq.05144.out" FT misc_feature complement(1398660..1398893) FT /note="Match to PF00043 GST, Glutathione S-transferases. FT Score 24.28" FT CDS join(1400279..1400435,1400598..1400918,1400966..1401196, FT 1401235..1401287,1401344..1401376) FT /colour=3 FT /gene="wtf11" FT /gene="meu24" FT /gene="SPCC1281.08" FT /label=wtf11 FT /note="SPCC1281.08, len:264," FT /product="hypothetical wtf protein; meiotic expression FT upregulated" FT /fasta_file="fasta/c1281.tab.seq.05145.out" FT misc_feature 1400436..1400441 FT /colour=6 FT /note="gtacgg, splice donor sequence" FT misc_feature 1400584..1400597 FT /colour=6 FT /note="ttaactattcgtag, splice branch and acceptor" FT misc_feature 1400919..1400924 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1400954..1400965 FT /colour=6 FT /note="ctaattcattag, splice branch and acceptor" FT misc_feature 1402052..1402944 FT /note="nominal overlap with cosmid SPCC622, EM:AL033127 S. FT pombe chromosome 3" FT misc_feature 1402119..1402944 FT /note="wtf pseudogene" FT misc_feature 1402052..1402944 FT /note="nominal overlap with cosmid SPCC1281, EM:AL035218 FT S. pombe chromosome 3" FT misc_feature 1402430..1403569 FT /colour=4 FT /note="wtf pseudogene" FT misc_feature 1403570..1412427 FT /note="putative gene free region, 7 small orfs have been FT pr edicted but they are all very hypothetical" FT CDS complement(1405206..1405655) FT /colour=9 FT /gene="SPCC622.01c" FT /label=SPCC622.01c FT /note="SPCC622.01c, len:149" FT /product="very hypothetical protein" FT /fasta_file="fasta/c622.tab.seq.04625.out" FT CDS 1405976..1406359 FT /colour=9 FT /gene="SPCC622.02" FT /label=SPCC622.02 FT /note="SPCC622.02, len:127" FT /product="very hypothetical protein" FT /fasta_file="fasta/c622.tab.seq.04626.out" FT CDS complement(1406869..1407267) FT /colour=12 FT /gene="SPCC622.03c" FT /label=SPCC622.03c FT /note="SPCC622.03c, len:132" FT /product="hypothetical protein; possibly S. pombe FT specific; highly similar to SPCC622.06c; contains 2 FT predicted transmembrane helices" FT /fasta_file="fasta/c622.tab.seq.04627.out" FT CDS 1407577..1407999 FT /colour=9 FT /gene="SPCC622.04" FT /label=SPCC622.04 FT /note="SPCC622.04, len:140" FT /product="very hypothetical protein" FT /fasta_file="fasta/c622.tab.seq.04628.out" FT CDS 1409064..1409411 FT /colour=9 FT /gene="SPCC622.05" FT /label=SPCC622.05 FT /note="SPCC622.05, len:115" FT /product="very hypothetical protein" FT /fasta_file="fasta/c622.tab.seq.04629.out" FT CDS complement(1409716..1410084) FT /colour=12 FT /gene="SPCC622.06c" FT /label=SPCC622.06c FT /note="SPCC622.06c, len:122" FT /product="hypothetical protein; possibly S. pombe FT specific; highly similar to SPCC622.03c; contains 2 FT predicted transmembrane helices" FT /fasta_file="fasta/c622.tab.seq.04630.out" FT CDS 1410397..1410783 FT /colour=9 FT /gene="SPCC622.07" FT /label=SPCC622.07 FT /note="SPCC622.07, len:128" FT /product="very hypothetical protein" FT /fasta_file="fasta/c622.tab.seq.04631.out" FT CDS complement(1412424..1412822) FT /colour=2 FT /gene="hta1" FT /gene="SPCC622.08c" FT /label=hta1 FT /note="SPCC622.08c, len:132" FT /product="histone h2a-alpha" FT /fasta_file="fasta/c622.tab.seq.04632.out" FT misc_feature complement(1412460..1412819) FT /colour=9 FT /note="Pfam match to entry PF00125 histone, Core histone FT H2 A/H2B/H3/H4" FT CDS 1413384..1413764 FT /colour=2 FT /gene="htb1" FT /gene="SPCC622.09" FT /label=htb1 FT /note="SPCC622.09, len:126" FT /product="histone h2b-alpha" FT /fasta_file="fasta/c622.tab.seq.04633.out" FT misc_feature 1413408..1413758 FT /colour=9 FT /note="Pfam match to entry PF00125 histone, Core histone FT H2 A/H2B/H3/H4" FT CDS complement(join(1414537..1416811,1416878..1417050)) FT /colour=8 FT /gene="SPCC622.10c" FT /label=SPCC622.10c FT /note="SPCC622.10c, len:815" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c622.tab.seq.04634.out" FT misc_feature complement(1414954..1414983) FT /colour=8 FT /note="PS00152 ATP synthase alpha and beta subunits FT signatu re" FT misc_feature complement(1416812..1416824) FT /colour=6 FT /note="ctaacgattttag, splice branch and acceptor" FT misc_feature complement(1416872..1416877) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS join(1418000..1418338,1418534..1419883) FT /colour=10 FT /gene="SPCC622.11" FT /label=SPCC622.11 FT /note="SPCC622.11, len:425, SIMILARITY:Caenorhabditis FT elega ns., Q18695, hypothetical proteinc47g2.4., (644 aa), FT fasta scores: opt: 252, E():1.9e-15, (24.4% identity in FT 431 aa)" FT /product="hypothetical protein; Pfam-B PB014912; contains FT 8 predicted transmembrane helices; predicted N-terminal FT signal sequence; conserved in C. elegans Drosophila CG8135 FT and Arabidopsis; no apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c622.tab.seq.04635.out" FT misc_feature 1418339..1418344 FT /colour=6 FT /note="gtaggt, splice donor sequence" FT misc_feature 1418519..1418533 FT /colour=6 FT /note="ctaacttatttgtag, splice branch and acceptor" FT CDS complement(1420357..1421712) FT /EC_number="1.4.1.4" FT /colour=7 FT /gene="SPCC622.12c" FT /label=SPCC622.12c FT /note="SPCC622.12c, len:451, SIMILARITY:Emericella FT nidulans , DHE4_EMENI, nadp-specific glutamate FT dehydrogenase, (459 a a), fasta scores: opt: 1906, E():0, FT (64.0% identity in 455 aa)" FT /product="nadp-specific glutamate dehydrogenase" FT /fasta_file="fasta/c622.tab.seq.04636.out" FT misc_feature complement(1420369..1421589) FT /colour=9 FT /note="Pfam match to entry PF00208 E_L_F_V_dh, FT Glutamate/Le ucine/Phenylalanine/Valine dehydrogenase" FT CDS complement(1423450..1426746) FT /colour=10 FT /gene="SPCC622.13c" FT /label=SPCC622.13c FT /note="SPCC622.13c, len:1098, LOW SIMILARITY:Homo sapiens, FT O43156, kiaa0406., (799 aa), fasta scores: opt: 246, FT E():8. 2e-11, (21.1% identity in 739 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YKL033W" FT /fasta_file="fasta/c622.tab.seq.04637.out" FT misc_feature complement(1423546..1423569) FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS join(1427998..1428210,1428532..1428609,1428688..1429080, FT 1429177..1429422) FT /colour=7 FT /gene="SPCC622.14" FT /label=SPCC622.14 FT /note="SPCC622.14, len:309, SIMILARITY:Saccharomyces FT cerevi siae, YDL226C, GCS1_YEAST, zinc finger protein FT gcs1., (352 aa), fasta scores: opt: 363, E():0, (35.8% FT identity in 327 aa)" FT /product="zinc finger protein; zf-GCS type; gcs1 homolog; FT putative ADP- ribosylation factor; GTPase-activating FT protein; similar to S. cerevisiae GCS1" FT /fasta_file="fasta/c622.tab.seq.04638.out" FT misc_feature 1428211..1428216 FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature 1428517..1428531 FT /colour=6 FT /note="ctaacttctatacag, splice branch and acceptor" FT misc_feature 1428610..1428615 FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature 1428673..1428687 FT /colour=6 FT /note="ctaacacattttaag, splice branch and acceptor" FT misc_feature 1429081..1429086 FT /colour=6 FT /note="gtaaat, splice donor sequence" FT misc_feature 1429161..1429176 FT /colour=6 FT /note="ctgactctgtttttag, splice branch and acceptor" FT CDS complement(1430006..1431679) FT /colour=8 FT /gene="SPCC622.15c" FT /label=SPCC622.15c FT /note="SPCC622.15c, len:557" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c622.tab.seq.04639.out" FT CDS complement(1432599..1435445) FT /colour=7 FT /gene="SPCC622.16c" FT /label=SPCC622.16c FT /note="SPCC622.16c, len:948, SIMILARITY:Caenorhabditis FT eleg ans., Q22796, coded for by c. elegans cDNA cm9h11., FT (1070 a a), fasta scores: opt: 347, E():2.3e-19, (29.4% FT identity in 293 aa)" FT /product="conserved protein" FT /fasta_file="fasta/c622.tab.seq.04640.out" FT misc_feature complement(1433967..1433996) FT /colour=8 FT /note="PS00659 Glycosyl hydrolases family 5 signature" FT misc_feature join(1436078..1436081,1436172..1436235,1436496..1436750, FT 1436823..1437549) FT /note="SPCC622.17 old prediction" FT misc_feature 1436449..1437339 FT /colour=9 FT /note="Pfam match to entry PF01261 AP_endonulease2, AP FT endo nucleases family 2" FT CDS 1436449..1437549 FT /EC_number="4.2.99.18" FT /colour=2 FT /gene="apn1" FT /gene="SPCC622.17" FT /label=apn1 FT /note="SPCC622.17, len:366" FT /product="DNA (apurinic or apyrimidinic site) lyase, FT endonuclease" FT /fasta_file="fasta/c622.tab.seq.04641.out" FT misc_feature 1436751..1436822 FT /note="in frame splice which has good consensus branch FT signal, improves homology, but does not agree with mRNA - FT putative alteRNAtive splice" FT CDS 1438053..1438640 FT /colour=2 FT /gene="rpl6" FT /gene="SPCC622.18" FT /label=rpl6 FT /note="SPCC622.18, len:195" FT /product="60S ribosomal protein L6" FT /fasta_file="fasta/c622.tab.seq.04642.out" FT misc_feature 1438113..1438637 FT /colour=9 FT /note="Pfam match to entry PF01159 L6e, Ribosomal protein FT L 6e" FT CDS join(1439275..1439299,1439343..1440739) FT /colour=10 FT /gene="SPCC622.19" FT /label=SPCC622.19 FT /note="SPCC622.19, len:473" FT /product="hypothetical protein; conserved in fungi- FT Gaillardin et al" FT /fasta_file="fasta/c622.tab.seq.00048.out" FT misc_feature 1439300..1439305 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 1439330..1439342 FT /colour=6 FT /note="ctaacgaaagcag, splice branch and acceptor" FT misc_feature 1442211..1442952 FT /note="nominal overlap with cosmid SPCC61, EM:AL034381 S. FT pombe chromosome 3" FT misc_feature complement(1442571..1442594) FT /colour=6 FT /note="ctaacacaatgtcttctcttttag, splice branch and FT acceptor" FT misc_feature complement(1442677..1442682) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1442211..1442952 FT /note="nominal overlap with cosmid SPCC622, EM:AL033127 S. FT pombe chromosome 3" FT misc_feature complement(1442571..1442594) FT /colour=6 FT /note="ctaacacaatgtcttctcttttag, splice branch and FT acceptor" FT misc_feature complement(1442677..1442682) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS 1443902..1444825 FT /colour=2 FT /gene="spt3" FT /gene="SPCC61.02" FT /label=spt3 FT /note="SPCC61.02, len:307" FT /product="transcriptional regulator; putative SAGA complex FT (Spt-Ada-Gcn5-Acetyltransferase); similar to S. cerevisiae FT SPT3" FT /fasta_file="fasta/c61.tab.seq.05066.out" FT CDS 1445553..1446536 FT /colour=10 FT /gene="SPCC61.03" FT /label=SPCC61.03 FT /note="SPCC61.03, len:327, SIMILARITY:Saccharomyces FT cerevisiae, YKP1_YEAST, hypothetical 37.4 kD protein, (337 FT aa), fasta scores: opt: 626, E():0, (43.3% identity in 321 FT aa)" FT /product="conserved protein" FT /fasta_file="fasta/c61.tab.seq.05067.out" FT misc_feature 1445652..1446476 FT /colour=9 FT /note="Pfam match to entry PF01256 UPF0031, FT Uncharacterized protein family UPF0031" FT CDS complement(join(1447243..1447411,1447515..1447807, FT 1448056..1448277)) FT /colour=7 FT /gene="SPCC61.04c" FT /label=SPCC61.04c FT /note="SPCC61.04c, len:227, SIMILARITY:Saccharomyces FT cerevi siae, YGR172c, YIPA_YEAST, Golgi membrane protein, FT (870 aa ), fasta scores: opt: 426, E():8.8e-27, (45.4% FT identity in 196 aa)" FT /product="putative Golgi membrane protein" FT /fasta_file="fasta/c61.tab.seq.05068.out" FT misc_feature complement(1447412..1447429) FT /colour=6 FT /note="ctaactgtatctttttag, splice branch and acceptor" FT misc_feature complement(1447509..1447514) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature complement(1447808..1447823) FT /colour=6 FT /note="ctaacttcttcattag, splice branch and acceptor" FT misc_feature complement(1448050..1448055) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT CDS 1450506..1451915 FT /colour=12 FT /gene="SPCC61.05" FT /label=SPCC61.05 FT /note="SPCC61.05, len:469, signal sequence predicted 1- FT 19aa, SIMILARITY:Schizosaccharomyces pombe, Q9Y7S5, FT hypothetical 54.3 kD protein., (478 aa), fasta scores: FT opt: 394, E():1.2e-18, (21.5% identity in 447 aa)" FT /product="similar to S. pombe SPCC569.06; possibly S. FT pombe specific" FT /fasta_file="fasta/c61.tab.seq.05069.out" FT misc_feature 1454442..1454445 FT /note="nominal overlap with cosmid SPCC11E10, EM:AL121783 FT S. pombe chromosome 3" FT misc_feature 1454442..1454445 FT /note="nominal overlap with cosmid SPCC61, EM:AL034381 S. FT pombe chromosome 3" FT misc_feature 1454445..1455290 FT /note="Match to PF01053 Cys_Met_Meta_PP, Cys/Met FT metabolism PLP-dependent enzyme Score 283.71" FT CDS complement(1455716..1456858) FT /colour=2 FT /gene="gpi8" FT /gene="SPCC11E10.02c" FT /label=gpi8 FT /note="SPCC11E10.02c, len:380, SIMILARITY:Saccharomyces FT cerevisiae, GPI8_YEAST, gpi-anchor transamidase, (411 aa), FT fasta scores: opt: 1284, E():0, (66.9% identity in 272 aa)" FT /product="anchor transamidase; essential; required for GPI FT anchor attachment; similar to S. cerevisiae GPI8" FT /fasta_file="fasta/c11E10.tab.seq.05269.out" FT misc_feature complement(1455929..1456852) FT /note="Pfam match to entry PF01650 Peptidase_C13, FT Peptidase C13 family, score 446.00, E-value 3.3e-130" FT CDS 1457336..1458391 FT /colour=7 FT /gene="SPCC11E10.03" FT /label=SPCC11E10.03 FT /note="SPCC11E10.03, len:351, SIMILARITY:low to FT Saccharomyces cerevisiae, JNM1_YEAST, nuclear migration FT protein jnm1., (373 aa), fasta scores: opt: 172, FT E():0.0021, (24.4% identity in 308 aa)" FT /product="predicted coiled-coil region; possibly involved FT in nuclear migration and control of astral microtubules FT during mitotic growth; similar to S. cerevisiae JNM1" FT /fasta_file="fasta/c11E10.tab.seq.05270.out" FT CDS 1458761..1460092 FT /colour=8 FT /gene="SPCC11E10.04" FT /label=SPCC11E10.04 FT /note="SPCC11E10.04, len:443" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c11E10.tab.seq.05271.out" FT CDS complement(1461409..1463127) FT /colour=7 FT /gene="SPCC11E10.05c" FT /label=SPCC11E10.05c FT /note="SPCC11E10.05c, len:572, SIMILARITY:Caenorhabditis FT elegans., YY4E_CAEEL, hypothetical 54.3 kD protein FT c33h5.14 in chromosome iv., (485 aa), fasta scores: opt: FT 741, E():0, (34.7% identity in 447 aa)" FT /product="putative nucleotide phosphatase" FT /fasta_file="fasta/c11E10.tab.seq.05272.out" FT misc_feature complement(1461805..1463121) FT /note="Match to PF01150 GDA1_CD39, GDA1/CD39 (nucleoside FT phosphatase) family Score 411.77" FT CDS complement(1464153..1465238) FT /colour=10 FT /gene="SPCC11E10.06c" FT /label=SPCC11E10.06c FT /note="SPCC11E10.06c, len:361, SIMILARITY:Saccharomyces FT cerevisiae, Q02884, YPL107W, (456 aa), fasta scores: opt: FT 207, E():1.9e-06, (25.3% identity in 400 aa)" FT /product="conserved protein; similar to S. cerevisiae FT YPL101W" FT /fasta_file="fasta/c11E10.tab.seq.05273.out" FT CDS complement(join(1465673..1465961,1466058..1466500, FT 1466556..1466695,1466753..1466906)) FT /colour=7 FT /gene="SPCC11E10.07c" FT /label=SPCC11E10.07c FT /note="SPCC11E10.07c, len:341, SIMILARITY:Saccharomyces FT cerevisiae, E2BA_YEAST, translation initiation factor eif- FT 2b alpha subunit, (305 aa), fasta scores: opt: 747, E():0, FT (42.7% identity in 344 aa)" FT /product="putative translation initiation factor eif-2b FT alpha subunit; similar to S. cerevisiae GCN3" FT /fasta_file="fasta/c11E10.tab.seq.05274.out" FT misc_feature complement(join(1465709..1465961,1466058..1466500, FT 1466556..1466695,1466753..1466834)) FT /note="Match to PF01008 IF-2B, Initiation factor 2 subunit FT Score 156.44" FT misc_feature complement(1465962..1465975) FT /colour=6 FT /note="ctaacgttttttag, splice branch and acceptor" FT misc_feature complement(1466052..1466057) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature complement(1466501..1466520) FT /colour=6 FT /note="ctaattctccacggctttag, splice branch and acceptor" FT misc_feature complement(1466550..1466555) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(1466696..1466713) FT /colour=6 FT /note="ctgatgtttttctattag, splice branch and acceptor" FT misc_feature complement(1466747..1466752) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT LTR complement(1467009..1467316) FT /note="TF2 type LTR" FT LTR 1467347..1467527 FT /note="LTR fragment" FT CDS 1469074..1472196 FT /colour=2 FT /gene="rik1" FT /gene="SPCC11E10.08" FT /label=rik1 FT /note="SPCC11E10.08, len:1040" FT /product="silencing protein; required for silencing at the FT mating type loci" FT /fasta_file="fasta/c11E10.tab.seq.05275.out" FT misc_feature complement(1472714..1472728) FT /colour=6 FT /note="ctaacaatttttaag, splice branch and acceptor" FT misc_feature complement(1472751..1472756) FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature complement(join(1472889..1473200,1473267..1474160)) FT /note="Match to PF00128 alpha-amylase, Alpha amylase Score FT 291.05" FT misc_feature complement(1473201..1473215) FT /colour=6 FT /note="ttaacatttatttag, splice branch and acceptor" FT misc_feature complement(1473261..1473266) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1473617..1476175 FT /note="nominal overlap with cosmid SPCC188, EM:AL049662 S. FT pombe chromosome 3" FT intron 1475973..1475980 FT /note="intron tRNA Lys anticodon CTT" FT misc_feature 1473617..1476175 FT /note="nominal overlap with cosmid SPCC11E10, EM:AL121783 FT S. pombe chromosome 3" FT CDS join(1476677..1476700,1476744..1476839,1476880..1477093, FT 1477425..1478179,1478232..1478530,1478620..1478878) FT /colour=2 FT /gene="par1" FT /gene="SPCC188.02" FT /label=par1 FT /note="SPCC188.02, len:547, SIMILARITY:Oryctolagus FT cuniculus, Q28653, protein phosphatase pp2a0 b' subunit FT gamma isoform., (586 aa), fasta scores: opt: 1779, E():0, FT (52.3% identity in 507 aa)" FT /product="protein phosphatase PP2A, subunit B'; required FT for normal cytokinesis; required for morphogenesis; FT required for normal stress tolerance; possibly involved in FT regulation of the septation initiation network" FT /fasta_file="fasta/c188.tab.seq.05148.out" FT misc_feature 1476701..1476706 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 1476729..1476743 FT /colour=6 FT /note="ttaaccagaatctag, splice branch and acceptor" FT misc_feature 1476840..1476845 FT /colour=6 FT /note="gtacgg, splice donor sequence" FT misc_feature 1476865..1476879 FT /colour=6 FT /note="ttaacattttcatag, splice branch and acceptor" FT misc_feature 1477094..1477099 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1477408..1477424 FT /colour=6 FT /note="ctaacctgtctatttag, splice branch and acceptor" FT misc_feature 1478180..1478185 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1478214..1478231 FT /colour=6 FT /note="ctaacgatgacaatatag, splice branch and acceptor" FT misc_feature 1478531..1478536 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1478605..1478619 FT /colour=6 FT /note="ctgacgttttgttag, splice branch and acceptor" FT CDS join(1479204..1481117,1481158..1481289,1481350..1481578, FT 1481627..1481736,1481799..1482041) FT /colour=2 FT /gene="cnd3" FT /gene="SPCC188.03" FT /label=cnd3 FT /note="SPCC188.03, len:874, SIMILARITY:Saccharomyces FT cerevisiae, Q06680, chromosome iv cosmid 9798., (1051 aa), FT fasta scores: opt: 406, E():2.4e-18, (30.0% identity in FT 949 aa)" FT /product="condensin subunit; XCAP-G; involved in FT chromosome condensation; similar to S. cerevisiae YCG1" FT /fasta_file="fasta/c188.tab.seq.05149.out" FT misc_feature 1481118..1481123 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1481144..1481157 FT /colour=6 FT /note="cttacaacaactag, splice branch and acceptor" FT misc_feature 1481290..1481295 FT /colour=6 FT /note="gtaagg, splice donor sequence" FT misc_feature 1481335..1481349 FT /colour=6 FT /note="ttaacagcattttag, splice branch and acceptor" FT misc_feature 1481579..1481584 FT /colour=6 FT /note="gtgggg, splice donor sequence" FT misc_feature 1481611..1481626 FT /colour=6 FT /note="ctaacaacaaatgtag, splice branch and acceptor" FT misc_feature 1481737..1481742 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1481785..1481798 FT /colour=6 FT /note="ctaataatgtatag, splice branch and acceptor" FT CDS complement(join(1482038..1482180,1482245..1482658, FT 1482707..1482866)) FT /colour=7 FT /gene="SPCC188.04c" FT /label=SPCC188.04c FT /note="SPCC188.04c, len:237, SIMILARITY:Saccharomyces FT cerevisiae, Q12234, chromosome xv reading frame orf FT yor216c., (484 aa), fasta scores: opt: 163, E():0.023, FT (26.8% identity in 194 aa)" FT /product="possibly involved in vesicle docking; possibly FT involved in ER to golgi transport; similar to S. FT cerevisiae RUD3" FT /fasta_file="fasta/c188.tab.seq.05150.out" FT misc_feature complement(1482181..1482193) FT /colour=6 FT /note="ctaatcccttcag, splice branch and acceptor" FT misc_feature complement(1482239..1482244) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature complement(1482659..1482673) FT /colour=6 FT /note="ttaacattgatctag, splice branch and acceptor" FT misc_feature complement(1482701..1482706) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature 1482907..1483173 FT /note="SPCC188.05, len:87; removed from protein set- not FT considered coding" FT CDS complement(join(1483988..1485478,1485959..1486036)) FT /colour=2 FT /gene="srp54" FT /gene="SPCC188.06c" FT /label=srp54 FT /note="SPCC188.06c, len:521" FT /product="GTP binding signal recognition particle" FT /fasta_file="fasta/c188.tab.seq.05151.out" FT misc_feature complement(1485152..1485955) FT /colour=9 FT /note="Pfam match to entry PF00448 SRP54, SRP54-type FT protein" FT misc_feature complement(1485479..1485495) FT /colour=6 FT /note="ctaataattttatttag, splice branch and acceptor" FT misc_feature complement(1485953..1485958) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS 1487203..1489410 FT /colour=8 FT /gene="SPCC188.07" FT /label=SPCC188.07 FT /note="SPCC188.07, len:734, LOW SIMILARITY:Rattus FT norvegicus, GM13_RAT, cis-golgi matrix protein gm130., FT (912 aa), fasta scores: opt: 201, E():0.00054, (23.0% FT identity in 391 aa)" FT /product="hypothetical protein; sequence orphan; putative FT coiled-coil region" FT /fasta_file="fasta/c188.tab.seq.05152.out" FT CDS complement(join(1489834..1493054,1493134..1493236, FT 1493288..1493290)) FT /EC_number="3.1.2.15" FT /colour=7 FT /gene="SPCC188.08c" FT /label=SPCC188.08c FT /note="SPCC188.08c, len:1107, SIMILARITY:Saccharomyces FT cerevisiae, UBPF_YEAST, UBIQUITIN CARBOXYL-TERMINAL FT HYDROLASE 15 (EC 3.1.2.15), (1230 aa), fasta scores: opt: FT 1339, E():0, (2.5% identity in 1232 aa)" FT /product="ubiquitin carboxyl-terminal hydrolase" FT /fasta_file="fasta/c188.tab.seq.05153.out" FT misc_feature complement(1491836..1491949) FT /colour=9 FT /note="Pfam match to entry PF00443 UCH-2, Ubiquitin FT carboxyl-terminal hydrolases family 2" FT misc_feature complement(1492598..1492651) FT /colour=9 FT /note="Pfam match to entry PF00442 UCH-1, Ubiquitin FT carboxyl-terminal hydrolases family 2" FT misc_feature complement(1493055..1493068) FT /colour=6 FT /note="ctaacgggtcatag, splice branch and acceptor" FT misc_feature complement(1493128..1493133) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature complement(1493237..1493254) FT /colour=6 FT /note="ctaacttataatgtttag, splice branch and acceptor" FT misc_feature complement(1493282..1493287) FT /colour=6 FT /note="gtattg, splice donor sequence" FT CDS complement(1493838..1495667) FT /colour=12 FT /gene="SPCC188.09c" FT /label=SPCC188.09c FT /note="SPCC188.09c, len:608, is similar to SPCC188.10c FT (putative pseudogene) and SPAC1F8.06: contains 6 copies of FT a 36aa repeat motif" FT /product="hypothetical cell surface protein; FT serine/threonine-rich protein; agglutinin-like; possibly FT S. pombe specific" FT /fasta_file="fasta/c188.tab.seq.05154.out" FT misc_feature 1495863..1495872 FT /note="conflict with redundant cosmid c8A4: c188 has 10, FT c8 A4 only has9. Eventually c8A4 will be removed FT completely fr om the EMBL database" FT LTR 1497436..1497779 FT /colour=4 FT /note="lone degraded Tf2-type LTR" FT misc_feature 1500916..1509028 FT /note="nominal overlap with cosmid SPCC584, EM:AL032824 S. FT pombe chromosome 3" FT misc_feature 1503621..1503626 FT /colour=6 FT /note="gtaaac, splice donor sequence" FT misc_feature 1503649..1503663 FT /colour=6 FT /note="ctaacaacgccgcag, splice branch and acceptor" FT misc_feature 1505216..1505221 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1505250..1505263 FT /colour=6 FT /note="ctaacttttcttag, splice branch and acceptor" FT misc_feature 1505900..1505905 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1505919..1506752 FT /colour=9 FT /note="Pfam match to entry PF00735 GTP_CDC, cell division FT protein" FT misc_feature 1505944..1505961 FT /colour=6 FT /note="ttaacaaatataccacag, splice branch and acceptor" FT misc_feature complement(1507492..1507833) FT /colour=9 FT /note="Pfam match to entry PF00636 Ribonuclease_3, RNase3 FT domain" FT misc_feature complement(1508077..1508403) FT /colour=9 FT /note="Pfam match to entry PF00636 Ribonuclease_3, RNase3 FT domain" FT misc_feature 1500916..1509028 FT /note="overlap with cosmid SPCC188, EM:AL049662 S. pombe FT chromosome 3" FT misc_feature 1502962..1503074 FT /note="small conserved intergenic region, putative rRNA, FT 23532 23644 c188 S. pombe chromosome 3" FT misc_feature 1503621..1503626 FT /colour=6 FT /note="gtaaac, splice donor sequence" FT misc_feature 1503649..1503663 FT /colour=6 FT /note="ctaacaacgccgcag, splice branch and acceptor" FT misc_feature 1505216..1505221 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1505250..1505263 FT /colour=6 FT /note="ctaacttttcttag, splice branch and acceptor" FT misc_feature 1505900..1505905 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1505919..1506752 FT /colour=9 FT /note="Pfam match to entry PF00735 GTP_CDC, cell division FT p rotein" FT misc_feature 1505944..1505961 FT /colour=6 FT /note="ttaacaaatataccacag, splice branch and acceptor" FT misc_feature complement(1507492..1507833) FT /colour=9 FT /note="Pfam match to entry PF00636 Ribonuclease_3, RNase3 FT d omain., score 206.90, E-value 3.2e-58" FT misc_feature complement(1508077..1508403) FT /colour=9 FT /note="Pfam match to entry PF00636 Ribonuclease_3, RNase3 FT d omain., score 191.70, E-value 1.2e-53" FT misc_feature complement(1509790..1510068) FT /colour=9 FT /note="Pfam match to entry PF00271 helicase_C, Helicases FT co nserved C-terminal domain" FT CDS complement(join(1512483..1513602,1514074..1514096)) FT /colour=10 FT /gene="SPCC584.11c" FT /label=SPCC584.11c FT /note="SPCC584.11c, len:380, SIMILARITY:Saccharomyces FT cerev isiae, Q05515, similar to s. cerevisiae hypothetical FT pro tein l8083.10., (481 aa), fasta scores: opt: 501, FT E():1.5e- 25, (31.7% identity in 473 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YDR346C and paralogs; low similarity to FT NIFD/NIFK/NIFE/NIFN family" FT /fasta_file="fasta/c584.tab.seq.00033.out" FT misc_feature complement(1513603..1513617) FT /colour=6 FT /note="ctaactcgattttag, splice branch and acceptor" FT misc_feature complement(1514068..1514073) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS 1515695..1516042 FT /colour=9 FT /gene="SPCC584.12" FT /label=SPCC584.12 FT /note="SPCC584.12, len:115" FT /product="very hypothetical protein" FT /fasta_file="fasta/c584.tab.seq.04650.out" FT CDS 1517286..1518920 FT /colour=7 FT /gene="SPCC584.13" FT /label=SPCC584.13 FT /note="SPCC584.13, len:544, SIMILARITY:Schizosaccharomyces FT pombe, O74537, putative amino-acid permease., (557 aa), FT fas ta scores: opt: 1999, E():0, (53.6% identity in 539 FT aa)" FT /product="APC amino acid transporter" FT /fasta_file="fasta/c584.tab.seq.04651.out" FT misc_feature 1517445..1518788 FT /colour=9 FT /note="Pfam match to entry PF00324 aa_permeases, Amino FT acid permease" FT CDS 1519825..1521120 FT /colour=10 FT /gene="SPCC584.14" FT /label=SPCC584.14 FT /note="SPCC584.14, len:431, SIMILARITY:Arabidopsis FT thaliana , O81325, f6n15.2 protein., (475 aa), fasta FT scores: opt: 21 4, E():2e-07, (23.7% identity in 431 aa)" FT /product="hypothetical protein; Pfam-B_13174" FT /fasta_file="fasta/c584.tab.seq.04652.out" FT CDS complement(join(1521706..1523284,1523346..1523495, FT 1524036..1524091)) FT /colour=10 FT /gene="SPCC584.15c" FT /label=SPCC584.15c FT /note="SPCC584.15c, len:594, FT SIMILARITY:Schizosaccharomyces pombe, YA4C_SCHPO, FT hypothetical 65.9 kD protein c31a2.12 i n chromosome i., FT (596 aa), fasta scores: opt: 917, E():0, ( 32.8% identity FT in 586 aa)" FT /product="conserved protein; similar to S. cerevisiae FT YFR022W" FT /fasta_file="fasta/c584.tab.seq.04653.out" FT misc_feature complement(1523285..1523302) FT /colour=6 FT /note="ctaacactttttttatag, splice branch and acceptor" FT misc_feature complement(1523340..1523345) FT /colour=6 FT /note="gtatgg, splice donor sequence" FT misc_feature complement(1523496..1523513) FT /colour=6 FT /note="ctaacttctcgtttgtag, splice branch and acceptor" FT misc_feature complement(1524030..1524035) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT CDS complement(1525417..1526112) FT /colour=8 FT /gene="SPCC584.16c" FT /label=SPCC584.16c FT /note="SPCC584.16c, len:231" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c584.tab.seq.04654.out" FT CDS complement(1527372..1530392) FT /EC_number="1.8.1.2" FT /colour=7 FT /gene="SPCC584.01c" FT /label=SPCC584.01c FT /note="SPCC584.01c, len:1006, SIMILARITY:Saccharomyces FT carl sbergensis, Q12684, assimilatory sulfite reductase, FT (1035 a a), fasta scores: opt: 1571, E():0, (35.0% FT identity in 1055 aa)" FT /product="putative sulfite reductase" FT /fasta_file="fasta/c584.tab.seq.04655.out" FT misc_feature complement(1527474..1527827) FT /colour=9 FT /note="Pfam match to entry PF00175 oxidored_fad, FT Oxidoreduc tase FAD/NAD-binding domain" FT misc_feature complement(1527903..1528544) FT /colour=9 FT /note="Pfam match to entry PF00667 FAD_binding, potential FT F AD binding domain" FT LTR 1531050..1531398 FT /note="tf2 type LTR" FT misc_feature 1533026..1533145 FT /colour=9 FT /note="Pfam match to entry PF00649 Copper-fist, Copper FT fist DNA-binding domain" FT CDS join(1533026..1533057,1533108..1533200,1533245..1533653) FT /colour=7 FT /gene="SPCC584.02" FT /label=SPCC584.02 FT /note="SPCC584.02, len:177, SIMILARITY:Schizosaccharomyces FT pombe, YA4B_SCHPO, putative metal-binding regulatory FT protei n c31a2.11c in chromosome i., (411 aa), fasta FT scores: opt: 218, E():7.8e-08, (40.3% identity in 62 aa)" FT /product="putative metal-binding regulatory protein" FT /fasta_file="fasta/c584.tab.seq.04656.out" FT misc_feature 1533058..1533063 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 1533092..1533107 FT /colour=6 FT /note="ttaacacttactctag, splice branch and acceptor" FT misc_feature 1533201..1533206 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1533229..1533244 FT /colour=6 FT /note="ttaacttgaaattcag, splice branch and acceptor" FT CDS complement(1533922..1535577) FT /colour=10 FT /gene="SPCC584.03c" FT /label=SPCC584.03c FT /note="SPCC584.03c, len:551, SIMILARITY:Saccharomyces FT cerev isiae, YGR4_YEAST, hypothetical 50.3 kD protein in FT ace1-rad 54 intergenic region., (440 aa), fasta scores: FT opt: 513, E( ):3.1e-25, (30.3% identity in 449 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YGL164C" FT /fasta_file="fasta/c584.tab.seq.04657.out" FT CDS join(1536353..1536482,1536566..1538424) FT /colour=2 FT /gene="sup35" FT /gene="SPCC584.04" FT /label=sup35 FT /note="SPCC584.04, len:662" FT /product="omnipotent nonsense suppressor, ef1 alpha factor FT -like GTP-bindingprotein." FT /fasta_file="fasta/c584.tab.seq.04658.out" FT misc_feature 1536483..1536488 FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature 1536551..1536565 FT /colour=6 FT /note="ttaacttcttgctag, splice branch and acceptor" FT misc_feature 1537058..1538260 FT /colour=9 FT /note="Pfam match to entry PF00009 GTP_EFTU, Elongation FT fac tor Tu family" FT CDS join(1539107..1539134,1539173..1539213,1539430..1541442) FT /colour=2 FT /gene="sec1" FT /gene="SPCC584.05" FT /label=sec1 FT /note="SPCC584.05, len:693, SIMILARITY:Bos taurus, FT STX1_BOV IN, syntaxin binding protein 1, (594 aa), fasta FT scores: opt : 937, E():0, (27.7% identity in 589 aa)" FT /product="syntaxin binding protein" FT /fasta_file="fasta/c584.tab.seq.04659.out" FT misc_feature 1539135..1539140 FT /colour=6 FT /note="gtatgg, splice donor sequence" FT misc_feature 1539161..1539172 FT /colour=6 FT /note="ctaacaaataag, splice branch and acceptor" FT misc_feature 1539214..1539219 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 1539374..1540870 FT /colour=9 FT /note="Pfam match to entry PF00995 Sec1, Sec1 family" FT misc_feature 1539415..1539429 FT /colour=6 FT /note="ctaacagataaatag, splice branch and acceptor" FT misc_feature 1541799..1542718 FT /note="nominal overlap with cosmid SPCC1753, EM:AL035210 FT S. pombe chromosome 3" FT misc_feature complement(1542562..1542581) FT /colour=6 FT /note="ctaatttttccaatgtttag, splice branch and acceptor" FT misc_feature complement(1542683..1542688) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT intron complement(1542562..1542688) FT /note="confirmed by mRNA" FT misc_feature 1541799..1542718 FT /note="nominal overlap with cosmid SPCC584, EM:AL032824 S. FT pombe chromosome 3" FT misc_feature complement(1542562..1542581) FT /colour=6 FT /note="ctaatttttccaatgtttag, splice branch and acceptor" FT misc_feature complement(1542683..1542688) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS complement(1544081..1545481) FT /colour=2 FT /gene="git3" FT /gene="SPCC1753.02c" FT /label=git3 FT /note="SPCC1753.02c, len:466" FT /product="glucose-triggered adenylate cyclase activation FT protein; similar to S. cerevisiae GPR1" FT /fasta_file="fasta/c1753.tab.seq.05060.out" FT misc_feature complement(1547665..1548080) FT /note="putative RNA gene as hits dbj|AU007386|AU007386 FT Schi zosaccharomyces pombe cDNA, clone spc01882 but no ORF FT in re gion" FT CDS complement(join(1548788..1549540,1549646..1549759, FT 1549817..1549969)) FT /colour=2 FT /gene="rec7" FT /gene="SPCC1753.03c" FT /label=rec7 FT /note="SPCC1753.03c, len:339" FT /product="meiotic recombination protein; similar to S. FT cerevisiae REC114" FT /fasta_file="fasta/c1753.tab.seq.00009.out" FT misc_feature complement(1549541..1549553) FT /colour=6 FT /note="ttaataaatttag, splice branch and acceptor" FT misc_feature complement(1549640..1549645) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1549760..1549774) FT /colour=6 FT /note="ttaacaaacaaacag, splice branch and acceptor" FT misc_feature complement(1549811..1549816) FT /colour=6 FT /note="gtacgc, splice donor sequence" FT CDS 1550904..1551965 FT /colour=2 FT /gene="tol1" FT /gene="SPCC1753.04" FT /label=tol1 FT /note="SPCC1753.04, len:353, SIMILARITY:Saccharomyces FT cerevisiae, YOL064C, HAL2_YEAST, halotolerance protein FT hal2, (35 7 aa), fasta scores: opt: 838, E():0, (43.6% FT identity in 34 2 aa)" FT /product="3'(2'),5'-bisphosphate nucleotidase; inositol FT monophosphatase family; similar to S. cerevisiae MET22" FT /fasta_file="fasta/c1753.tab.seq.05062.out" FT misc_feature 1551255..1551419 FT /note="Match to PF00459 inositol_P, Inositol FT monophosphatase family Score 54.44" FT misc_feature 1551300..1551341 FT /colour=8 FT /note="PS00629 Inositol monophosphatase family signature 1" FT misc_feature 1551663..1551812 FT /note="Match to PF00459 inositol_P, Inositol FT monophosphatase family Score 54.09" FT misc_feature 1551756..1551800 FT /colour=8 FT /note="PS00630 Inositol monophosphatase family signature 2" FT CDS 1552594..1553484 FT /colour=8 FT /gene="SPCC1753.05" FT /label=SPCC1753.05 FT /note="SPCC1753.05, len:296" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1753.tab.seq.05063.out" FT misc_feature 1553993..1555622 FT /note="nominal overlap with cosmid SPCC162, EM:AL023860 S. FT pombe chromosome 3" FT misc_feature complement(1554289..1554303) FT /colour=6 FT /note="ttaacttacttttag, splice branch and acceptor" FT misc_feature complement(1554342..1554347) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1553993..1555622 FT /note="nominal overlap with cosmid SPCC1753, EM:AL035210 FT S. pombe chromosome 3" FT misc_feature complement(1554289..1554303) FT /colour=6 FT /note="ttaacttacttttag, splice branch and acceptor" FT misc_feature complement(1554342..1554347) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS 1557345..1558709 FT /colour=7 FT /gene="SPCC162.11c" FT /label=SPCC162.11c FT /note="SPCC162.11c, len:454, SIMILARITY:Caenorhabditis FT elegans., Q19583, f19b6.1a protein., (515 aa), fasta FT scores: opt: 1058, E():0, (38.5% identity in 431 aa)" FT /product="putative uridine kinase; similar to S. FT cerevisiae URK1" FT /fasta_file="fasta/c162.tab.seq.04685.out" FT misc_feature 1557426..1557449 FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS complement(1559124..1560140) FT /colour=7 FT /gene="SPCC162.10" FT /label=SPCC162.10 FT /note="SPCC162.10, len:338, SIMILARITY:Caenorhabditis FT elegans., Q21483, m03c11.1 protein., (379 aa), fasta FT scores: opt: 511, E():2.2e-24, (32.6% identity in 316 aa)" FT /product="putative serine/threonine protein kinase" FT /fasta_file="fasta/c162.tab.seq.04686.out" FT misc_feature complement(1559235..1560053) FT /colour=9 FT /note="Pfam match to entry pkinase PF00069, Eukaryotic FT prot ein kinase domain" FT misc_feature complement(1559664..1559702) FT /colour=8 FT /note="PS00108 Serine/Threonine protein kinases active- FT site signature" FT misc_feature complement(1559964..1560035) FT /colour=8 FT /note="PS00107 protein kinases ATP-binding region FT signature" FT CDS 1562886..1566047 FT /EC_number="1.1.1.34" FT /colour=2 FT /gene="hmg1" FT /gene="SPCC162.09c" FT /label=hmg1 FT /note="SPCC162.09c, len:1053" FT /product="3-hydroxy-3-methylglutaryl-coenzyme A reductase; FT involved in cholesterol biosynthesis; involved in sterol FT biosynthesis" FT /fasta_file="fasta/c162.tab.seq.04687.out" FT misc_feature 1565259..1565357 FT /colour=9 FT /note="Pfam match to entry HMG-CoA_red1 PF00368, FT Hydroxymet hylglutaryl-coenzyme A reductase" FT misc_feature 1565685..1565768 FT /colour=9 FT /note="Pfam match to entry HMG-CoA_red2 PF00369, FT Hydroxymet hylglutaryl-coenzyme A reductase" FT CDS 1566542..1572055 FT /colour=7 FT /gene="SPCC162.08c" FT /label=SPCC162.08c FT /note="SPCC162.08c, len:1837, SIMILARITY:Homo sapiens, FT Q99968, nuclear pore complex-associated protein tpr, (2363 FT aa), fasta scores: opt: 1057, E():0, (22.7% identity in FT 1831 aa)" FT /product="putative nuclear pore complex associated; FT similar to S. cerevisiae MLP1" FT /fasta_file="fasta/c162.tab.seq.04688.out" FT misc_feature 1571081..1571104 FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS complement(join(1572548..1574633,1574916..1574950)) FT /colour=10 FT /gene="SPCC162.07" FT /label=SPCC162.07 FT /note="SPCC162.07, len:706, SIMILARITY:Saccharomyces FT cerevisiae, Q05785, chromosome xii cosmid 8167., (613 aa), FT fasta scores: opt: 690, E():1.2e-24, (31.0% identity in FT 717 aa)" FT /product="ENTH domain protein; endocytocis or cytoskeletal FT machinery" FT /fasta_file="fasta/c162.tab.seq.04689.out" FT misc_feature complement(1574243..1574614) FT /note="Match to PF01417 ENTH, ENTH domain Score 230.12" FT misc_feature complement(1574634..1574646) FT /colour=6 FT /note="ctaacattcgcag, splice branch and acceptor" FT misc_feature complement(1574910..1574915) FT /colour=6 FT /note="gtaatt, splice donor sequence" FT LTR 1575624..1575971 FT /note="Tf2 type LTR" FT misc_feature 1575749..1576879 FT /note="True extent of overlap with cosmid c13B11 S. pombe FT c hromosome 3" FT conflict complement(1576852..1576874) FT /citation=[1] FT /colour=4 FT /note="conflict with overlap in cosmid c13B11. Amiguity FT wr t number of As, c13B11has either 21 or 24. SPCC162 has FT 23" FT CDS join(1578040..1578108,1578166..1578317,1578375..1578786) FT /colour=10 FT /gene="SPCC162.06c" FT /label=SPCC162.06c FT /note="SPCC162.06c, len:210, SIMILARITY:Candida albicans, FT O93996, conserved protein (218 aa), fasta scores: opt: 564, FT E():1.4e-23, (44.3% identity in 219 aa)" FT /product="conserved hypothetical protein; predicted coiled- FT coil; similar to S. cerevisiae YDR486C" FT /fasta_file="fasta/c162.tab.seq.04690.out" FT misc_feature 1578109..1578114 FT /colour=6 FT /note="gttcgt, splice donor sequence" FT misc_feature 1578147..1578165 FT /colour=6 FT /note="ctaatatcttttattttag, splice branch and acceptor" FT misc_feature 1578318..1578323 FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature 1578357..1578374 FT /colour=6 FT /note="ctaacgacagcaatatag, splice branch and acceptor" FT CDS complement(1579120..1579935) FT /EC_number="2.1.1.114" FT /colour=7 FT /gene="coq3" FT /gene="SPCC162.05" FT /label=coq3 FT /note="SPCC162.05, len:271, SIMILARITY:Escherichia coli., FT UBIG_ECOLI, 3-demethylubiquinone-9 3-methyltransferase, FT (240 aa), fasta scores: opt: 545, E():6.5e-30, (38.8% FT identity in 242 aa)" FT /product="putative 3-demethylubiquinone-9 3- FT methyltransferase; coenzyme Q (ubiquinone) biosynthesis FT pathway" FT /fasta_file="fasta/c162.tab.seq.04691.out" FT LTR complement(1580076..1580426) FT /note="tf1 type LTR" FT CDS complement(join(1581023..1581513,1581550..1581906, FT 1581955..1582227,1582459..1582594)) FT /colour=3 FT /gene="wtf12" FT /gene="SPCC162.04" FT /label=wtf12 FT /note="SPCC162.04, len:418," FT /product="hypothetical wtf protein" FT /fasta_file="fasta/c162.tab.seq.04692.out" FT misc_feature complement(1581514..1581524) FT /colour=6 FT /note="ctaacatacag, splice branch and acceptor" FT intron complement(1581514..1581549) FT /note="intron confirmed by EST" FT misc_feature complement(1581544..1581549) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1582228..1582240) FT /colour=6 FT /note="ttaatgctttcag, splice branch and acceptor" FT misc_feature complement(1582453..1582458) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT LTR complement(1582882..1583218) FT /note="tf2 type LTR" FT CDS complement(1583804..1584682) FT /colour=7 FT /gene="SPCC162.03" FT /label=SPCC162.03 FT /note="SPCC162.03, len:292, SIMILARITY:Streptomyces FT coelicolor., CAB53269, putative oxidoreductase SCJ9A.08, FT (282 aa), fasta scores: opt: 477, E():2.1e-24, (32.1% FT identity in 274 aa)" FT /product="short chain dehydrogenase" FT /fasta_file="fasta/c162.tab.seq.04693.out" FT misc_feature complement(1584128..1584682) FT /colour=9 FT /note="Pfam match to entry adh_short PF00106, FT Alcohol/other dehydrogenases, short chain type" FT CDS 1585380..1588325 FT /colour=7 FT /gene="SPCC162.02c" FT /label=SPCC162.02c FT /note="SPCC162.02c, len:981, SIMILARITY:Streptomyces FT roseosporus., O30915, daptomycin biosynthetic protein FT subunit, (1590 aa), fasta scores: opt: 269, E():1.5e-09, FT (22.8% identity in 602 aa)" FT /product="putative AMP-binding dehydrogenase protein" FT /fasta_file="fasta/c162.tab.seq.04694.out" FT misc_feature 1585530..1586756 FT /colour=9 FT /note="Pfam match to entry PF00501 AMP-binding, AMP- FT binding enzyme, score -197.80, E-value 0.00022" FT misc_feature 1585872..1585907 FT /colour=8 FT /note="PS00455 putative AMP-binding domain signature" FT CDS 1588769..1589503 FT /colour=7 FT /gene="SPCC162.01c" FT /label=SPCC162.01c FT /note="SPCC162.01c, len:244, SIMILARITY:Homo sapiens, FT Q15410, nucleic acid binding protein, (163 aa), fasta FT scores: opt: 265, E():4.5e-08, (36.0% identity in 172 aa)" FT /product="putative splicing factor p27; similar to human FT RY-1; no apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c162.tab.seq.04695.out" FT misc_feature 1589258..1589281 FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 1589748..1591952 FT /note="nominal overlap with cosmid SPCC13B11, EM:AL032681 FT S. pombe chromosome 3" FT misc_feature complement(1589748..1591952) FT /note="nominal overlap with cosmid SPCC162, EM:AL023860 S. FT pombe chromosome 3" FT CDS 1592259..1593311 FT /EC_number="1.1.1.1" FT /colour=2 FT /gene="adh1" FT /gene="adh" FT /gene="SPCC13B11.01" FT /label=adh1 FT /note="SPCC13B11.01, len:350" FT /product="alcohol dehydrogenase I; reducing acetaldehyde FT to ethanol, regenerating NAD+" FT /fasta_file="fasta/c13B11.tab.seq.05020.out" FT misc_feature 1592274..1593299 FT /colour=9 FT /note="Pfam match to entry PF00107 adh_zinc, zinc binding FT d ehydrogenases" FT misc_feature 1592460..1592504 FT /colour=8 FT /note="PS00059 zinc-containing alcohol dehydrogenases FT signature" FT CDS complement(1594302..1594718) FT /colour=9 FT /gene="SPCC13B11.02c" FT /label=SPCC13B11.02c FT /note="SPCC13B11.02c, len:138, questionable ORF" FT /product="very hypothetical protein" FT /fasta_file="fasta/c13B11.tab.seq.05021.out" FT CDS complement(join(1595942..1596187,1596253..1596658, FT 1596843..1596961)) FT /EC_number="3.1.2.6" FT /colour=7 FT /gene="SPCC13B11.03c" FT /label=SPCC13B11.03c FT /note="SPCC13B11.03c, len:256, FT SIMILARITY:Schizosaccharomyces pombe, CAB57337, putative FT hydroxyacylglutathione hydrolase, SPAC824.07, (256 aa), FT fasta scores: opt: 1005, E():0, (55.9% identity in 254 aa)" FT /product="putative hydroxyacylglutathione hydrolase; FT glyoxalase II family" FT /fasta_file="fasta/c13B11.tab.seq.05022.out" FT misc_feature complement(1596188..1596203) FT /colour=6 FT /note="ctaacaagtttcctag, splice branch and acceptor" FT misc_feature complement(1596247..1596252) FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature complement(join(1596253..1596658,1596843..1596901)) FT /note="Match to lactamase_B , Score 33.12" FT misc_feature complement(1596659..1596673) FT /colour=6 FT /note="ctgacaaagctccag, splice branch and acceptor" FT misc_feature complement(1596837..1596842) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1598363..1599475) FT /colour=9 FT /note="Pfam match to entry PF00107 adh_zinc, zinc binding FT d ehydrogenases" FT misc_feature complement(1599203..1599247) FT /colour=8 FT /note="PS00059 zinc-containing alcohol dehydrogenases FT signature" FT misc_feature 1599274..1599746 FT /note="nominal overlap with cosmid SPCC777, EM:AL031532 S. FT pombe chromosome 3" FT misc_feature complement(1599431..1599443) FT /colour=6 FT /note="cttattaaaacag, splice branch and acceptor" FT misc_feature complement(1599464..1599469) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1599274..1599746 FT /note="nominal overlap with cosmid SPCC13B11, EM:AL032681 FT S. pombe chromosome 3" FT misc_feature complement(1599431..1599443) FT /colour=6 FT /note="cttattaaaacag, splice branch and acceptor" FT misc_feature complement(1599464..1599469) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS 1600406..1602073 FT /colour=7 FT /gene="SPCC777.02" FT /label=SPCC777.02 FT /note="SPCC777.02, len:555, (region appears to be a FT duplication of a region of chromosome I cosmid c21D3, FT region encompasses SPCC777.02 & SPC77703 ), FT SIMILARITY:Schizosaccharomyces pombe, O74915, putative FT transcriptional activator, zinc finger containing., (684 FT aa), fasta scores: opt: 1561, E():0, (42.7% identity in FT 567 aa)" FT /product="putative transcriptional activator" FT /fasta_file="fasta/c777.tab.seq.04887.out" FT CDS complement(1602412..1603602) FT /colour=7 FT /gene="SPCC777.03c" FT /label=SPCC777.03c FT /note="SPCC777.03c, len:396, (region appears to be a FT duplication of a region of chromosome I cosmid c21D3, FT region encompasses S PCC777.02 & SPC77703), FT SIMILARITY:Schizosaccharomyces pombe, YAOA_SCHPO, FT hypothetical 48.2 kD protein c11d3.10 in chromosome i., FT (434 aa), fasta scores: opt: 1603, E():0, (58.5% identity FT in 390 aa)" FT /product="nifs homolog, putative aminotransferase" FT /fasta_file="fasta/c777.tab.seq.04888.out" FT CDS 1603854..1605419 FT /colour=7 FT /gene="SPCC777.04" FT /label=SPCC777.04 FT /note="SPCC777.04, len:521, SIMILARITY:Saccharomyces FT cerevisiae, DIP5_YEAST, dicarboxylic amino acid permease., FT (608 aa), fasta scores: opt: 1502, E():0, (45.4% identity FT in 489 aa)" FT /product="APC amino acid transporter" FT /fasta_file="fasta/c777.tab.seq.04889.out" FT misc_feature 1603977..1605377 FT /note="Match to PF00324 aa_permeases, Amino acid permease FT Score 567.85" FT misc_feature 1604076..1604171 FT /colour=8 FT /note="PS00218 Amino acid permeases signature" FT CDS join(1606032..1606171,1606253..1607057) FT /colour=2 FT /gene="gtr2" FT /gene="SPCC777.05" FT /label=gtr2 FT /note="SPCC777.05, len:314, SIMILARITY:Mus musculus, FT Q9Z124, ygr163w mRNA homolog, complete cds., (398 aa), FT fasta scores: opt: 1317, E():0, (62.8% identity in 312 aa)" FT /product="yeast gtr2 homolog, novel small GTPase subfamily FT protein; C-terminal domain interacts with Gtr1p in a two- FT hybrid assay" FT /fasta_file="fasta/c777.tab.seq.04890.out" FT misc_feature 1606059..1606082 FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 1606172..1606177 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1606231..1606252 FT /colour=6 FT /note="ctaataatttgtttgtatatag, splice branch and acceptor" FT CDS complement(join(1607565..1608133,1608296..1608632)) FT /colour=7 FT /gene="SPCC777.06c" FT /label=SPCC777.06c FT /note="SPCC777.06c, len:301, SIMILARITY:Arabidopsis FT thaliana, AAD15317, putative hydrolase., (290 aa), fasta FT scores: opt: 321, E():4.1e-14, (33.8% identity in 299 aa)" FT /product="putative hydrolase; no apparent S. cerevisiae FT ortholog" FT /fasta_file="fasta/c777.tab.seq.04891.out" FT misc_feature complement(1608134..1608155) FT /colour=6 FT /note="ctaaccgtttgttgcattgtag, splice branch and acceptor" FT misc_feature complement(1608290..1608295) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT CDS join(1610710..1611314,1611395..1611926) FT /colour=7 FT /gene="SPCC777.07" FT /label=SPCC777.07 FT /note="SPCC777.07, len:378, SIMILARITY:Candida albicans, FT MNT2_CANAL, putative mannosyltransferase mnt2, (461 aa), FT fasta scores: opt: 1167, E():0, (48.2% identity in 338 aa)" FT /product="putative alpha-1,2 mannosyltransferase" FT /fasta_file="fasta/c777.tab.seq.04892.out" FT misc_feature join(1610716..1611314,1611395..1611803) FT /note="Match to PF01793 Glyco_transf_15, Glycolipid 2- FT alpha-mannosyltransferase Score 730.89" FT misc_feature 1611315..1611320 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1611378..1611394 FT /colour=6 FT /note="ctaaccaattctttaag, splice branch and acceptor" FT CDS complement(1612196..1613464) FT /colour=8 FT /gene="SPCC777.08c" FT /label=SPCC777.08c FT /note="SPCC777.08c, len:422, FT SIMILARITY:Schizosaccharomyces pombe, YDT3_SCHPO, FT hypothetical 35.5 kD protein c6b12.03c in chromosome i., FT (302 aa), fasta scores: opt: 138, E():0.1, (20.2% identity FT in 173 aa)" FT /product="hypothetical protein; sequence orphan; very low FT similar to S. pombe SPAC6B12.03c; possibly S. pombe FT specific" FT /fasta_file="fasta/c777.tab.seq.04893.out" FT CDS complement(join(1614224..1615477,1615726..1615797)) FT /colour=2 FT /gene="arg1" FT /gene="SPCC777.09c" FT /label=arg1 FT /note="SPCC777.09c, len:441, SIMILARITY:Saccharomyces FT cerevisiae, ARGD_YEAST, acetylornithine aminotransferase , FT (423 aa), fasta scores: opt: 1135, E():0, (41.7% identity FT in 427 aa)" FT /product="acetylornithine aminotransferase; similar to S. FT cerevisiae ARG8; complements arg1-230 ( personal FT communication Richard Hoffman )" FT /fasta_file="fasta/c777.tab.seq.04894.out" FT misc_feature complement(1614296..1615363) FT /note="Match to PF00202 aminotran_3, Aminotransferases FT class-III pyridoxal-phosphate Score 391.24" FT misc_feature complement(1614653..1614772) FT /colour=8 FT /note="PS00600 Aminotransferases class-III pyridoxal- FT phosphate attachment site" FT misc_feature complement(1615478..1615491) FT /colour=6 FT /note="ttaaccaagtttag, splice branch and acceptor" FT intron complement(1615478..1615725) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(1615720..1615725) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS complement(join(1615979..1616088,1616336..1616483, FT 1616595..1616683,1616766..1616861,1616928..1617018)) FT /colour=2 FT /gene="ubc12" FT /gene="SPCC777.10c" FT /label=ubc12 FT /note="SPCC777.10c, len:177, SIMILARITY:Homo sapiens, FT O76069, ubiquitin-conjugating enzyme e2, (183 aa), fasta FT scores: opt: 620, E():0, (50.3% identity in 183 aa)" FT /product="ubiquitin conjugating enzyme" FT /fasta_file="fasta/c777.tab.seq.04895.out" FT misc_feature complement(join(1616036..1616088,1616336..1616483, FT 1616595..1616683,1616766..1616862)) FT /note="Match to PF00179 UQ_con, Ubiquitin-conjugating FT enzyme Score 31.97" FT misc_feature complement(1616089..1616109) FT /colour=6 FT /note="ctaacaaacgatatcttttag, splice branch and acceptor" FT misc_feature complement(1616330..1616335) FT /colour=6 FT /note="gtaggt, splice donor sequence" FT misc_feature complement(1616436..1616480) FT /colour=8 FT /note="PS00183 Ubiquitin-conjugating enzymes active site" FT misc_feature complement(1616484..1616498) FT /colour=6 FT /note="ctgacctactgttag, splice branch and acceptor" FT misc_feature complement(1616589..1616594) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(1616684..1616696) FT /colour=6 FT /note="ttaacatgaaaag, splice branch and acceptor" FT misc_feature complement(1616760..1616765) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1616862..1616884) FT /colour=6 FT /note="ctaaccattttcgatgaatttag, splice branch and acceptor" FT misc_feature complement(1616922..1616927) FT /colour=6 FT /note="gtgcga, splice donor sequence" FT CDS 1617563..1617949 FT /colour=8 FT /gene="SPCC777.11" FT /label=SPCC777.11 FT /note="SPCC777.11, len:128" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c777.tab.seq.00022.out" FT CDS complement(join(1618110..1618547,1618668..1618946)) FT /colour=8 FT /gene="SPCC777.12c" FT /label=SPCC777.12c FT /note="SPCC777.12c, len:238aa" FT /product="hypothetical protein; sequence orphan; contains FT predicted N-terminal signal sequence" FT /fasta_file="fasta/c777.tab.seq.04897.out" FT misc_feature complement(1618548..1618561) FT /colour=6 FT /note="ctaactaattttag, splice branch and acceptor" FT misc_feature complement(1618662..1618667) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS complement(join(1619474..1619613,1619744..1619819, FT 1619869..1619958)) FT /colour=8 FT /gene="SPCC777.17c" FT /label=SPCC777.17c FT /note="SPCC777.17c, len:326, NOTE: putativedditional FT splicing at C-term, LOW SIMILARITY:Rickettsia prowazekii, FT RL9_RICPR, 50S ribosomal protein L9, (171 aa), fasta FT scores: opt: 124, E():0.026, (40.7% identity in 59 aa4)" FT /product="hypothetical protein; sequence orphan; low FT similarity to L9 50s ribosomal proteins" FT /fasta_file="fasta/c777.tab.seq.00021.out" FT misc_feature complement(1619614..1619628) FT /colour=6 FT /note="ctaactttacaaaag, splice branch and acceptor" FT misc_feature complement(1619738..1619743) FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature complement(1619820..1619836) FT /colour=6 FT /note="cttacacagttatttag, splice branch and acceptor" FT misc_feature complement(1619863..1619868) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS join(1620609..1622063,1622104..1622217,1622261..1622610, FT 1622665..1622722,1622770..1622844,1622932..1623237) FT /colour=2 FT /gene="vps35" FT /gene="SPCC777.13" FT /label=vps35 FT /note="SPCC777.13, len:785, SIMILARITY:Arabidopsis FT thaliana, O22557, similar to mouse mem3., (848 aa), fasta FT scores: opt: 834, E():0, (36.4% identity in 777 aa)" FT /product="vacuolar retromer coat protein" FT /fasta_file="fasta/c777.tab.seq.04899.out" FT misc_feature 1622064..1622069 FT /colour=6 FT /note="gtacta, splice donor sequence" FT intron 1622064..1622103 FT /note="confirmed intron" FT misc_feature 1622092..1622103 FT /colour=6 FT /note="ctgacaacttag, splice branch and acceptor" FT misc_feature 1622218..1622223 FT /colour=6 FT /note="gtatat, splice donor sequence" FT intron 1622218..1622260 FT /note="confirmed intron" FT misc_feature 1622245..1622260 FT /colour=6 FT /note="ctaacaatacatttag, splice branch and acceptor" FT misc_feature 1622611..1622616 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT intron 1622611..1622664 FT /note="confirmed intron" FT misc_feature 1622648..1622664 FT /colour=6 FT /note="ctaattttttactttag, splice branch and acceptor" FT misc_feature 1622723..1622728 FT /colour=6 FT /note="gtaagc, splice donor sequence" FT intron 1622723..1622769 FT /note="confirmed intron" FT misc_feature 1622755..1622769 FT /colour=6 FT /note="ctaacattcctatag, splice branch and acceptor" FT misc_feature 1622845..1622850 FT /colour=6 FT /note="gtatgc, splice donor sequence" FT intron 1622845..1622931 FT /note="confirmed intron" FT misc_feature 1622917..1622931 FT /colour=6 FT /note="ttaacttttttttag, splice branch and acceptor" FT CDS join(1623637..1624630,1624739..1625178) FT /colour=2 FT /gene="prp4" FT /gene="SPCC777.14" FT /label=prp4 FT /note="SPCC777.14, len:477" FT /product="serine/threonine protein kinase; involved in pre- FT MRNA splicing; no apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c777.tab.seq.04900.out" FT misc_feature join(1624111..1624630,1624721..1624860) FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain Score 129.90" FT misc_feature 1624129..1624200 FT /colour=8 FT /note="PS00107 protein kinases ATP-binding region FT signature" FT misc_feature 1624480..1624518 FT /colour=8 FT /note="PS00108 Serine/Threonine protein kinases active- FT site signature" FT misc_feature 1624631..1624636 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1624723..1624738 FT /colour=6 FT /note="ctaacctttaaaatag, splice branch and acceptor" FT misc_feature 1625080..1625166 FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain Score 22.29" FT CDS 1625602..1626582 FT /colour=10 FT /gene="SPCC777.15" FT /label=SPCC777.15 FT /note="SPCC777.15, len:326, SIMILARITY:Saccharomyces FT cerevisiae, YL05_YEAST, hypothetical 41.7 kD protein in FT sfp1-ctr3 intergenic region., (367 aa), fasta scores: opt: FT 917, E():0, (46.0% identity in 324 aa)" FT /product="conserved protein; UPF0034 family" FT /fasta_file="fasta/c777.tab.seq.04901.out" FT misc_feature 1625668..1626522 FT /note="Match to PF01207 UPF0034, Uncharacterized protein FT family UPF0034 Score 217.74" FT misc_feature 1625905..1625961 FT /colour=8 FT /note="PS01136 Uncharacterized protein family UPF0034 FT signa ture" FT misc_feature complement(1627462..1627475) FT /colour=6 FT /note="ctaacagcatatag, splice branch and acceptor" FT misc_feature complement(1627513..1627518) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1628427..1628528 FT /note="nominal overlap with cosmid SPCC663, EM:AL031307 FT S.pombe chromosome 3" FT misc_feature 1628427..1628528 FT /note="nominal overlap with cosmid SPCC777, EM:AL031532 FT S.pombe chromosome 3" FT LTR complement(1630425..1630774) FT /note="Tf2-type degraded LTR" FT CDS join(1631338..1631467,1631539..1631763,1631813..1632126) FT /colour=3 FT /gene="wtf15" FT /gene="SPCC663.02" FT /label=wtf15 FT /note="SPCC663.02, len:222aa" FT /product="wtf-like protein partial" FT /fasta_file="fasta/c663.tab.seq.04904.out" FT misc_feature 1631468..1631473 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 1631527..1631538 FT /colour=6 FT /note="ttaacgtaaaag, splice branch and acceptor" FT misc_feature 1631764..1631769 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1631801..1631812 FT /colour=6 FT /note="ctaattctatag, splice branch and acceptor" FT LTR complement(1633088..1633445) FT /colour=4 FT /note="Lone Tf1 type LTR" FT misc_feature 1633613 FT /colour=4 FT /note="real end of cosmid c777 before cutting to nominal" FT CDS 1633725..1634609 FT /colour=4 FT /gene="wtf7-pseudo" FT /gene="SPCC663.17" FT /label=wtf7-pseudo FT /note="SPCC663.17, len:295," FT /product="wtf-pseudo" FT /pseudo FT /fasta_file="fasta/c663.tab.seq.04905.out" FT CDS 1636874..1640962 FT /colour=2 FT /gene="pmd1" FT /gene="SPCC663.03" FT /label=pmd1 FT /note="SPCC663.03, len:1362aa" FT /product="ABC leptomycin efflux transporter" FT /fasta_file="fasta/c663.tab.seq.04906.out" FT misc_feature 1637168..1637992 FT /colour=9 FT /note="Pfam match to entry PF00664 ABC_membrane, ABC FT transp orter transmembrane region" FT misc_feature 1638215..1638796 FT /colour=9 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporte rs" FT misc_feature 1639256..1640095 FT /colour=9 FT /note="Pfam match to entry PF00664 ABC_membrane, ABC FT transp orter transmembrane region" FT misc_feature 1640312..1640869 FT /colour=9 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporte rs" FT CDS 1641921..1642076 FT /colour=2 FT /gene="rpl39" FT /gene="SPCC663.04" FT /label=rpl39 FT /note="SPCC663.04, len:51" FT /product="60S ribosomal protein L39" FT /fasta_file="fasta/c663.tab.seq.04907.out" FT misc_feature 1641945..1642073 FT /note="Match to PF00832 Ribosomal_L39, Ribosomal L39 FT protein Score 115.24" FT intron 1642081..1642142 FT /note="confirmed, in 3' UTR" FT mRNA 1642707..1643110 FT /note="mRNA from spc01382 but not associated with an ORF" FT CDS complement(1644667..1645455) FT /colour=2 FT /gene="cia1" FT /gene="SPCC663.05c" FT /label=cia1 FT /note="SPCC663.05c, len:262, SIMILARITY:Saccharomyces FT cerevisiae, ASF1_YEAST, anti-silencing protein 1., (279 FT aa), fasta scores: opt: 862, E():0, (55.8% identity in 258 FT aa)" FT /product="putative histone chaperone; possible replication- FT coupling assembly factor (RCAF) component; similar to S. FT cerevisiae ASF1; putative anti-silencing protein" FT /fasta_file="fasta/c663.tab.seq.04908.out" FT CDS complement(1646015..1646776) FT /colour=7 FT /gene="SPCC663.06c" FT /label=SPCC663.06c FT /note="SPCC663.06c, len:253, (there are 4 tandem copies of FT this hypothetical protein one (SPCC663.07 ) is FT frameshifted and has been labelled as a pseudogene), FT SIMILARITY:Saccharomyces cerevisiae, YKH1_YEAST, FT hypothetical 28.0 kD protein in lhs1-nup100 intergenic FT region., (256 aa), fasta scores: opt: 661, E():0, (42.6% FT identity in 256 aa)" FT /product="putative short chain dehydrogenase" FT /fasta_file="fasta/c663.tab.seq.04909.out" FT misc_feature complement(1646195..1646761) FT /colour=9 FT /note="Pfam match to entry PF00106 adh_short, FT Alcohol/other dehydrogenases, short chain type" FT CDS complement(1647545..1648296) FT /colour=4 FT /gene="SPCC663.07c" FT /label=SPCC663.07c FT /note="SPCC663.07c, len:249, (there are 4 tandem copies of FT this hypothetical protein this one (SPCC663.07 ) is FT frameshifted and has been labelled as a pseudogene), FT SIMILARITY:Saccharomyces cerevisiae, YKH1_YEAST, FT hypothetical 28.0 kD protein in lhs1-nup100 intergenic FT region., (256 aa), fasta scores: opt: 612, E():1.1e-31, FT (41.2% identity in 255 aa)" FT /product="short chain dehydrogenase pseudogene" FT /pseudo FT /fasta_file="fasta/c663.tab.seq.04910.out" FT misc_feature complement(1647727..1648281) FT /colour=9 FT /note="Pfam match to entry PF00106 adh_short, FT Alcohol/other dehydrogenases, short chain type" FT CDS complement(1648900..1649661) FT /colour=7 FT /gene="SPCC663.08c" FT /label=SPCC663.08c FT /note="SPCC663.08c, len:253, (there are 4 tandem copies of FT this hypo thetical protein, one (SPCC663.07 ) is FT frameshifted and has been labelled as a pseudogene), FT SIMILARITY:Saccharomyces cerevisiae, YKH1_YEAST, FT hypothetical 28.0 kD protein in lhs1-nup100 intergenic FT region., (256 aa), fasta scores: opt: 676, E():0, (44.3% FT identity in 255 aa)" FT /product="putative short chain dehydrogenase" FT /fasta_file="fasta/c663.tab.seq.04911.out" FT misc_feature complement(1649080..1649646) FT /colour=9 FT /note="Pfam match to entry PF00106 adh_short, short chain FT dehydrogenase, score 96.40, E-value 5.5e-25" FT CDS complement(1650428..1651189) FT /colour=7 FT /gene="SPCC663.09c" FT /label=SPCC663.09c FT /note="SPCC663.09c, len:253, there are 4 tandem copies of FT this hypo thetical protein, one (SPCC663.07 ) is FT frameshifted and has been labelled as a pseudogene), FT SIMILARITY:Saccharomyces cerevisiae, YKH1_YEAST, FT hypothetical 28.0 kD protein in lhs1-nup100 intergenic FT region., (256 aa), fasta scores: opt: 641, E():0, (42.6% FT identity in 256 aa)" FT /product="putative short chain dehydrogenase" FT /fasta_file="fasta/c663.tab.seq.04912.out" FT misc_feature complement(1650608..1651174) FT /colour=9 FT /note="Pfam match to entry PF00106 adh_short, FT Alcohol/other dehydrogenases, short chain type" FT CDS 1652172..1653680 FT /colour=10 FT /gene="SPCC663.10" FT /label=SPCC663.10 FT /note="SPCC663.10, len:502, SIMILARITY:Saccharomyces FT cerevisiae, Q02648, lpb1p., (567 aa), fasta scores: opt: FT 679, E():0, (34.9% identity in 547 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YPL030W; Pfam-B_19441 domain" FT /fasta_file="fasta/c663.tab.seq.04913.out" FT CDS 1654776..1655612 FT /colour=8 FT /gene="SPCC663.11" FT /label=SPCC663.11 FT /note="SPCC663.11, unknown, len:278aa" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c663.tab.seq.04914.out" FT CDS 1656569..1657579 FT /colour=2 FT /function="deletion causes sensitivity to low-dose FT caffeine and hydroxyurea" FT /gene="cid12" FT /gene="SPCC663.12" FT /label=cid12 FT /note="SPCC663.12, len:336, SIMILARITY:Schizosaccharomyces FT pombe, CAA91508, putative topoisomerase 1-related protein, FT SPAC12G12.13C, (616 aa), fasta scores: opt: 394, E():1.6e- FT 19, (26.3% identity in 338 aa)" FT /product="cid1-related; putative nucleotidyl transferase" FT /fasta_file="fasta/c663.tab.seq.04915.out" FT CDS complement(1657982..1658416) FT /colour=7 FT /gene="SPCC663.13c" FT /label=SPCC663.13c FT /note="SPCC663.13c, len:144, SIMILARITY:Caenorhabditis FT elegans., Q20220, similar to procollagen alpha chain 1(v) FT chain., (697 aa), fasta scores: opt: 212, E():3.2e-08, FT (30.3% identity in 152 aa)" FT /product="putative acetyltransferase; similar to S. FT cerevisiae YOR253W" FT /fasta_file="fasta/c663.tab.seq.04916.out" FT misc_feature complement(1658036..1658407) FT /colour=9 FT /note="Pfam match to entry PF00583 Acetyltransf, FT Acetyltransferase (GNAT) family, score 15.20, E-value FT 0.035" FT CDS complement(join(1658531..1659445,1659535..1660683)) FT /colour=10 FT /gene="SPCC663.14c" FT /label=SPCC663.14c FT /note="SPCC663.14c, len:646, FT SIMILARITY:Schizosaccharomyces pombe, YAK3_SCHPO, FT hypothetical 80.0 kD protein C1F7.03, (710 aa), fasta FT scores: opt: 435, E():56.1e-20, (21.4% identity in 555 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YPL221W; predicted N-terminal signal sequence; contains 8 FT predicted transmembrane helices" FT /fasta_file="fasta/c663.tab.seq.04917.out" FT misc_feature complement(1659446..1659463) FT /colour=6 FT /note="ctaatctggttgatatag, splice branch and acceptor" FT misc_feature complement(1659529..1659534) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS complement(1661182..1663155) FT /colour=8 FT /gene="SPCC663.15c" FT /label=SPCC663.15c FT /note="SPCC663.15c, len:657" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c663.tab.seq.04918.out" FT misc_feature complement(1663693..1663795) FT /note="nominal overlap with cosmid SPCC1902, EM:AL049521 FT S. pombe chromosome 3" FT misc_feature complement(1663795) FT /note="last base of stop codon of SPCC1902.02" FT CDS complement(join(1663795..1665317,1665383..1665544, FT 1665659..1665698)) FT /colour=10 FT /gene="SPCC1902.02" FT /gene="SPCC663.16c" FT /label=SPCC1902.02 FT /note="SPCC1902.02, len:574, FT SIMILARITY:Schizosaccharomyces pombe, YAI7_SCHPO, FT hypothetical 62.5 kD protein , (561 aa), fasta scores: FT opt: 368, E():1.2e-14, (25.9% identity in 517 aa)" FT /product="conserved protein; possibly localizes to cell FT pole / septum from GFP data; similar to S. cerevisiae PAM1" FT /fasta_file="fasta/c1902.tab.seq.05209.out" FT misc_feature 1663693..1663795 FT /note="nominal overlap with cosmid SPCC663, EM:AL031307 S. FT pombe chromosome 3" FT misc_feature complement(1664855..1664878) FT /colour=8 FT /note="PS00030 Eukaryotic putative RNA-binding region RNP- FT 1 signature" FT misc_feature complement(1665318..1665335) FT /colour=6 FT /note="ctaatcgagtcattttag, splice branch and acceptor" FT misc_feature complement(1665377..1665382) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(1665545..1665558) FT /colour=6 FT /note="ctaacgtgctttag, splice branch and acceptor" FT misc_feature complement(1665653..1665658) FT /colour=6 FT /note="gtatgg, splice donor sequence" FT misc_feature complement(1667768..1667887) FT /note="Match to PF00320 GATA, GATA zinc finger" FT misc_feature 1669267..1669393 FT /note="nominal overlap with cosmid SPCC417, EM:AL049512 S. FT pombe chromosome 3" FT misc_feature complement(1669267..1669393) FT /note="nominal overlap with cosmid SPCC1902, EM:AL049521 FT S. pombe chromosome 3" FT CDS complement(1671221..1671505) FT /colour=2 FT /gene="hos3" FT /gene="SPCC417.02" FT /label=hos3 FT /note="SPCC417.02, len:94" FT /product="required for growth under high osmotic stress; FT no apparent orthologs" FT /fasta_file="fasta/c417.tab.seq.00020.out" FT misc_feature complement(1671524..1676305) FT /note="putative gene free region" FT CDS join(1672903..1672951,1673011..1673264) FT /colour=9 FT /gene="SPCC417.03" FT /label=SPCC417.03 FT /note="SPCC417.03, len:100" FT /product="very hypothetical protein" FT /fasta_file="fasta/c417.tab.seq.05111.out" FT misc_feature 1672952..1672957 FT /colour=6 FT /note="gtaatt, splice donor sequence" FT misc_feature 1672983..1673010 FT /colour=6 FT /note="ctaatcatataccccatttttattatag, splice branch and FT acce ptor" FT CDS 1674214..1674756 FT /colour=9 FT /gene="SPCC417.04" FT /label=SPCC417.04 FT /note="SPCC417.04, len:180" FT /product="very hypothetical protein" FT /fasta_file="fasta/c417.tab.seq.05112.out" FT CDS complement(1676318..1677856) FT /colour=7 FT /gene="SPCC417.05c" FT /label=SPCC417.05c FT /note="SPCC417.05c, len:512, LOW FT SIMILARITY:Schizosaccharom yces pombe, YAIA_SCHPO, FT hypothetical 103.2 kD protein c24b1 1.10c in chromosome i, FT (932 aa), fasta scores: opt: 468, E( ):1.9e-29, (25.9% FT identity in 513 aa)" FT /product="possibly involved in chitin biosynthesis; by FT similarity" FT /fasta_file="fasta/c417.tab.seq.05113.out" FT CDS complement(join(1678371..1679186,1679229..1679678, FT 1679728..1680336)) FT /colour=7 FT /gene="SPCC417.06c" FT /label=SPCC417.06c FT /note="SPCC417.06c, len:624, FT SIMILARITY:Schizosaccharomyces pombe, KAIB_SCHPO, putative FT serine/threonine-protein kinas e c24b11.11c, (607 aa), FT fasta scores: opt: 1564, E():0, (44 .5% identity in 494 FT aa)" FT /product="putative serine/threonine protein kinase" FT /fasta_file="fasta/c417.tab.seq.05114.out" FT misc_feature complement(1678846..1678920) FT /colour=9 FT /note="Pfam match to entry PF00433 pkinase_C, protein FT kinas e C terminal domain" FT misc_feature complement(1678942..1679853) FT /colour=9 FT /note="Pfam match to entry PF00069 pkinase, Eukaryotic FT prot ein kinase domain" FT misc_feature complement(1679187..1679201) FT /colour=6 FT /note="ctaaaaaaaaattag, splice branch and acceptor" FT misc_feature complement(1679223..1679228) FT /colour=6 FT /note="gtaaag, splice donor sequence" FT misc_feature complement(1679409..1679447) FT /colour=8 FT /note="PS00108 Serine/Threonine protein kinases active- FT site signature" FT misc_feature complement(1679679..1679693) FT /colour=6 FT /note="ctaacaacggctcag, splice branch and acceptor" FT misc_feature complement(1679722..1679727) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature complement(1679764..1679835) FT /colour=8 FT /note="PS00107 protein kinases ATP-binding region FT signature" FT CDS complement(1680824..1684171) FT /colour=10 FT /gene="SPCC417.07c" FT /label=SPCC417.07c FT /note="SPCC417.07c, len:1115, SIMILARITY:Emericella FT nidulan s, O60039, apsb gene., (1051 aa), fasta scores: FT opt: 305, E ():1e-17, (22.3% identity in 1032 aa)" FT /product="predicted coiled-coil protein; similar to S. FT cerevisiae USO1; simialar to mammalian integrin, protein FT for protein transport from ER to Golgi" FT /fasta_file="fasta/c417.tab.seq.05115.out" FT LTR 1685478..1685817 FT /colour=4 FT /note="tf2-type lone LTR" FT CDS 1686566..1689709 FT /colour=7 FT /gene="SPCC417.08" FT /label=SPCC417.08 FT /note="SPCC417.08, len:1047, SIMILARITY:Candida albicans, FT E F3_CANAL, elongation factor 3, (1049 aa), fasta scores: FT opt : 4378, E():0, (64.1% identity in 1053 aa)" FT /product="putative elongation factor 3" FT /fasta_file="fasta/c417.tab.seq.05116.out" FT misc_feature 1687943..1688431 FT /colour=9 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporte rs" FT misc_feature 1688663..1689493 FT /colour=9 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporte rs" FT tRNA 1690613..1690709 FT /note="tRNA Ser anticodon TGA" FT tRNA 1690717..1690788 FT /note="tRNA Met anticodon CAT" FT rRNA 1691845..1691975 FT /gene="5s" FT /note="5s rRNA gene and flanks" FT CDS complement(join(1692682..1693627,1693727..1694316, FT 1694416..1694836,1694986..1695332)) FT /colour=10 FT /gene="SPCC417.09c" FT /label=SPCC417.09c FT /note="SPCC417.09c, len:767, SIMILARITY:Emericella FT nidulans , O42805, pRNA protein, (818 aa), fasta scores: FT opt: 547, E ():0, (25.7% identity in 643 aa)" FT /product="putative transcriptional regulator; zinc finger FT protein; fungal binuclear cluster domain" FT /fasta_file="fasta/c417.tab.seq.05117.out" FT misc_feature complement(1693628..1693645) FT /colour=6 FT /note="ctaacgtttaacttttag, splice branch and acceptor" FT misc_feature complement(1693721..1693726) FT /colour=6 FT /note="gtaagg, splice donor sequence" FT misc_feature complement(1694317..1694337) FT /colour=6 FT /note="ctaacccgtttttctcaatag, splice branch and acceptor" FT misc_feature complement(1694410..1694415) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(1694837..1694846) FT /colour=6 FT /note="ctaatattag, splice branch and acceptor" FT misc_feature complement(1694877..1694990) FT /colour=9 FT /note="Pfam match to entry PF00172 Zn_clus, fungal Zn(2)- FT Cy s(6) binuclear cluster domain" FT misc_feature complement(1694980..1694985) FT /colour=6 FT /note="gtttgt, splice donor sequence" FT CDS 1696626..1698152 FT /colour=7 FT /gene="SPCC417.10" FT /label=SPCC417.10 FT /note="SPCC417.10, len:508, SIMILARITY:Saccharomyces FT cerevi siae, DAL5_YEAST, allantoate permease., (543 aa), FT fasta sco res: opt: 1054, E():0, (45.2% identity in 535 FT aa)" FT /product="putative MFS allantoate transporter" FT /fasta_file="fasta/c417.tab.seq.05118.out" FT CDS complement(1699090..1700397) FT /EC_number="5.4.3.8" FT /colour=7 FT /gene="SPCC417.11c" FT /label=SPCC417.11c FT /note="SPCC417.11c, len:435, SIMILARITY:Archaeoglobus FT fulgi dus., O29027, glutamate-1-semialdehyde FT aminotransferase, (4 18 aa), fasta scores: opt: 383, FT E():4.4e-30, (31.4% identit y in 411 aa)" FT /product="putative glutamate-1-semialdehyde aminotransfera FT se" FT /fasta_file="fasta/c417.tab.seq.05119.out" FT misc_feature complement(1699366..1699791) FT /colour=9 FT /note="Pfam match to entry PF00202 aminotran_3, FT Aminotransf erases class-III pyridoxal-phosphate" FT misc_feature complement(1699906..1700220) FT /colour=9 FT /note="Pfam match to entry PF00202 aminotran_3, FT Aminotransf erases class-III pyridoxal-phosphate" FT CDS 1700639..1702201 FT /colour=7 FT /gene="SPCC417.12" FT /label=SPCC417.12 FT /note="SPCC417.12, len:520, SIMILARITY:Candida rugosa, FT LIP4 _CANRU, lipase 4 , (549 aa), fasta scores: opt: 36 5, FT E():2.4e-18, (28.0% identity in 429 aa)" FT /product="putative carboxylesterase-lipase family member; FT no apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c417.tab.seq.05120.out" FT misc_feature 1700642..1701490 FT /colour=9 FT /note="Pfam match to entry PF00135 COesterase, FT Carboxyleste rases" FT tRNA 1702799..1702872 FT /note="tRNA Asn anticodon GTT" FT rRNA 1703023..1703152 FT /gene="5s" FT /note="5s rRNA gene and flanks" FT misc_feature 1705094..1709649 FT /note="nominal overlap with cosmid SPCC191, EM:AL049644 S. FT pombe chromosome 3" FT misc_feature 1705094..1709649 FT /note="nominal overlap with cosmid SPCC417, EM:AL035076 FT S.pombe chromosome 3" FT misc_feature complement(1709452..1710768) FT /colour=9 FT /note="Pfam match to entry PF00501 AMP-binding, AMP- FT binding enzyme" FT misc_feature complement(1711180..1713219) FT /note="putative gene free region" FT CDS complement(1711841..1712194) FT /colour=9 FT /gene="SPCC191.03c" FT /label=SPCC191.03c FT /note="SPCC191.03c, len:117, very questionable ORF" FT /product="very hypothetical protein" FT /fasta_file="fasta/c191.tab.seq.05179.out" FT CDS complement(1712422..1712724) FT /colour=9 FT /gene="SPCC191.04c" FT /label=SPCC191.04c FT /note="SPCC191.04c, len:100, questionable ORF" FT /product="very hypothetical protein" FT /fasta_file="fasta/c191.tab.seq.05180.out" FT CDS complement(1713219..1713854) FT /colour=8 FT /gene="SPCC191.05c" FT /label=SPCC191.05c FT /note="SPCC191.05c, len:211" FT /product="hypothetical protein; sequence orphan; has FT transcript profile on microarray" FT /fasta_file="fasta/c191.tab.seq.05181.out" FT CDS 1715039..1715455 FT /colour=8 FT /gene="SPCC191.06" FT /label=SPCC191.06 FT /note="SPCC191.06, len:138, questionable ORF" FT /product="hypothetical protein; sequence orphan; has FT transcript profile on microarray" FT /fasta_file="fasta/c191.tab.seq.05182.out" FT CDS 1715635..1715964 FT /colour=2 FT /gene="cyc1" FT /gene="SPCC191.07" FT /label=cyc1 FT /note="SPCC191.07, len:109" FT /product="cytochrome c; similar to S. cerevisiae CYC7" FT /fasta_file="fasta/c191.tab.seq.05183.out" FT misc_feature 1715650..1715955 FT /colour=9 FT /note="Pfam match to entry PF00034 cytochrome_c, FT Cytochrome c" FT LTR complement(1717181..1717529) FT /colour=4 FT /note="tf2-type LTR" FT CDS 1717651..1718055 FT /colour=8 FT /gene="SPCC191.08" FT /label=SPCC191.08 FT /note="SPCC191.08, len:134" FT /product="hypothetical protein; low similarity to S. FT cerevisiae YNL260C-essential protein of unknown function FT which localizes to cell wall; sequence orphan" FT /fasta_file="fasta/c191.tab.seq.05184.out" FT CDS complement(1720225..1720914) FT /colour=7 FT /gene="SPCC191.09c" FT /label=SPCC191.09c FT /note="SPCC191.09c, len:229, FT SIMILARITY:Schizosaccharomyces pombe, O59827, glutathione FT s-transferase., (230 aa), fasta scores: opt: 1220, E():0, FT (78.8% identity in 226 aa)" FT /product="putative glutathione s-transferase; similar to FT S. cerevisiae URE2" FT /fasta_file="fasta/c191.tab.seq.05185.out" FT misc_feature complement(1720273..1720905) FT /colour=9 FT /note="Pfam match to entry PF00043 GST, Glutathione S- FT transferases" FT CDS 1722728..1723177 FT /colour=8 FT /gene="SPCC191.10" FT /label=SPCC191.10 FT /note="SPCC191.10, len:149" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c191.tab.seq.05186.out" FT CDS 1725206..1726951 FT /EC_number="3.2.1.26" FT /colour=2 FT /gene="inv1" FT /gene="SPCC191.11" FT /label=inv1 FT /note="SPCC191.11, len:581" FT /product="invertase" FT /fasta_file="fasta/c191.tab.seq.05187.out" FT misc_feature 1725464..1726429 FT /colour=9 FT /note="Pfam match to entry PF00251 glycosyl_hydro2, FT Glycosyl hydrolases family 32" FT misc_feature complement(1727387..1727413) FT /colour=6 FT /note="ctgatgccaccccattattattcaaag, splice branch and FT acceptor" FT misc_feature complement(1727551..1727556) FT /colour=6 FT /note="gtatta, splice donor sequence" FT misc_feature 1727755..1730093 FT /note="nominal overlap with cosmid SPCC1450, EM:AL049559 FT S. pombe chromosome 3" FT misc_feature 1727755..1730093 FT /note="nominal overlap with cosmid SPCC191, EM:AL049644 S. FT pombe chromosome 3" FT misc_feature complement(1727965..1727970) FT /colour=6 FT /note="gtatcc, splice donor sequence" FT misc_feature 1730025..1730294 FT /colour=9 FT /note="Pfam match to entry PF00439 bromodomain, FT Bromodomain, score 121.00, E-value 9.8e-34" FT misc_feature 1730535..1730804 FT /colour=9 FT /note="Pfam match to entry PF00439 bromodomain, FT Bromodomain, score 141.70, E-value 9.3e-40" FT CDS 1732329..1733051 FT /colour=8 FT /gene="SPCC1450.03" FT /label=SPCC1450.03 FT /note="SPCC1450.03, len:240" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1450.tab.seq.05192.out" FT CDS join(1733674..1733753,1734001..1734565) FT /colour=2 FT /gene="tef5" FT /gene="SPCC1450.04" FT /label=tef5 FT /note="SPCC1450.04, len:214" FT /product="elongation factor 1 beta" FT /fasta_file="fasta/c1450.tab.seq.05193.out" FT misc_feature 1733754..1733759 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT intron 1733754..1734000 FT /colour=2 FT /note="confirmed intron" FT misc_feature 1733987..1734000 FT /colour=6 FT /note="ctaacgttttatag, splice branch and acceptor" FT misc_feature 1734302..1734562 FT /note="Pfam match to entry PF00736 EF1BD, Elongation FT factor 1 (beta/delta chain), score 188.90, E-value 7.9e-53" FT CDS complement(1735667..1736083) FT /colour=2 FT /gene="rox3" FT /gene="SPCC1450.05c" FT /label=rox3 FT /note="SPCC1450.05c, len:138" FT /product="RNA polymerase II holoenzyme and mediator FT subcomplex component (PMID: 11572939); involved in FT regulation of RNA polymerase II activity" FT /fasta_file="fasta/c1450.tab.seq.05194.out" FT CDS complement(1736327..1736827) FT /colour=7 FT /gene="SPCC1450.06c" FT /label=SPCC1450.06c FT /note="SPCC1450.06c, len:166, SIMILARITY:Saccharomyces FT cerevisiae, YBM4_YEAST, similar to glutaredoxin, (203 aa), FT fasta scores: opt: 260, E():6.1e-11, (35.4% identity in 96 FT aa)" FT /product="glutaredoxin-like protein; subcellular FT localization of GFP fusion- Nuclear rim" FT /fasta_file="fasta/c1450.tab.seq.05195.out" FT CDS complement(1737506..1738552) FT /EC_number="1.4.3.3" FT /colour=7 FT /gene="SPCC1450.07c" FT /label=SPCC1450.07c FT /note="SPCC1450.07c, len:348, SIMILARITY:Rhodotorula FT gracilis, and rhodosporidium toruloides, OXDA_RHOGC, d- FT amino acid oxidase, (368 aa), fasta scores: opt: 540, FT E():5.5e-28, (32.1% identity in 358 aa)" FT /product="putative d-amino acid oxidase; no apparent S. FT cerevisiae ortholog" FT /fasta_file="fasta/c1450.tab.seq.05196.out" FT misc_feature complement(1737509..1738531) FT /colour=9 FT /note="Pfam match to entry PF01266 DAO, D-amino acid FT oxidase" FT LTR complement(1739318..1739661) FT /colour=4 FT /note="tf2-type LTR" FT CDS complement(join(1740238..1740689,1740735..1740947, FT 1740997..1741242,1741410..1741548)) FT /colour=3 FT /gene="wtf8" FT /gene="SPCC1450.08c" FT /label=wtf8 FT /note="SPCC1450.08c, len:349" FT /product="hypothetical wtf protein" FT /fasta_file="fasta/c1450.tab.seq.05197.out" FT misc_feature complement(1740690..1740700) FT /colour=6 FT /note="ctaacacgcag, splice branch and acceptor" FT intron complement(1740690..1740734) FT /note="confirmed intron: intron confirmed by EST hits" FT misc_feature complement(1740729..1740734) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(1740948..1740959) FT /colour=6 FT /note="ctaactcattag, splice branch and acceptor" FT misc_feature complement(1740991..1740996) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1741243..1741255) FT /colour=6 FT /note="ttaatttaaacag, splice branch and acceptor" FT misc_feature complement(1741404..1741409) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT LTR complement(1741861..1742207) FT /colour=4 FT /note="tf2-type LTR" FT CDS complement(join(1742351..1742381,1742489..1744359)) FT /EC_number="3.1.1.5" FT /colour=7 FT /gene="SPCC1450.09c" FT /label=SPCC1450.09c FT /note="SPCC1450.09c, len:633, FT SIMILARITY:Schizosaccharomyces pombe, O13857, putative FT lysophospholipase , (624 aa), fasta scores: opt: 2588, FT E():0, (61.9% identity in 583 aa)" FT /product="putative lysophospholipase" FT /fasta_file="fasta/c1450.tab.seq.05198.out" FT misc_feature complement(1742382..1742397) FT /colour=6 FT /note="ctaatctaagaaccag, splice branch and acceptor" FT misc_feature complement(1742476..1744233) FT /colour=9 FT /note="Pfam match to entry PF01735 PLA2_B, FT Lysophospholipase catalytic domain, score 825.10, E-value FT 2.5e-244" FT misc_feature complement(1742483..1742488) FT /colour=6 FT /note="gtatgc, splice donor sequence" FT CDS complement(join(1747194..1748717,1748796..1748888)) FT /colour=10 FT /gene="SPCC1450.10c" FT /label=SPCC1450.10c FT /note="SPCC1450.10c, len:538, SIMILARITY:Saccharomyces FT cerevisiae, YNY0_YEAST, hypothetical 54.2 kD protein in FT zwf1-blh1/lap3 intergenic region., (491 aa), fasta scores: FT opt: 357, E():4.6e-15, (33.3% identity in 541 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YNL240C; similar to human nuclear prelamin A recognition FT factor and various hydrogenases; putative structural FT protein" FT /fasta_file="fasta/c1450.tab.seq.05199.out" FT misc_feature complement(1748718..1748729) FT /colour=6 FT /note="ctaacatgatag, splice branch and acceptor" FT misc_feature complement(1748790..1748795) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT CDS complement(1749533..1753549) FT /colour=2 FT /gene="cek1" FT /gene="SPCC1450.11c" FT /label=cek1 FT /note="SPCC1450.11c, len:1338" FT /product="serine/threonine protein kinase; overproduction FT supresses anaphase blocking mutation cut8; similar to S. FT cerevisiae RIM15" FT /fasta_file="fasta/c1450.tab.seq.05200.out" FT misc_feature complement(1750586..1750675) FT /colour=9 FT /note="Pfam match to entry PF00433 pkinase_C, protein FT kinase C terminal domain" FT misc_feature complement(1750676..1750981) FT /colour=9 FT /note="Pfam match to entry PF00069 pkinase, Eukaryotic FT protein kinase domain" FT misc_feature complement(1751339..1751785) FT /colour=9 FT /note="Pfam match to entry PF00069 pkinase, Eukaryotic FT protein kinase domain" FT CDS join(1755187..1755465,1755534..1755827,1755951..1756458, FT 1756536..1757269,1757457..1758107) FT /colour=10 FT /gene="SPCC1450.12" FT /label=SPCC1450.12 FT /note="SPCC1450.12, len:821, SIMILARITY:Saccharomyces FT cerevisiae, Q06839, chromosome xvi cosmid 9513., (1073 aa), FT fasta scores: opt: 478, E():9.1e-21, (26.0% identity in FT 611 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YPR097W; contains PX domain" FT /fasta_file="fasta/c1450.tab.seq.05201.out" FT misc_feature 1755466..1755471 FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature 1755512..1755533 FT /colour=6 FT /note="ctaaccagatattctttgttag, splice branch and acceptor" FT misc_feature 1755828..1755833 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1755935..1755950 FT /colour=6 FT /note="ctaacgaatattccag, splice branch and acceptor" FT misc_feature 1755939..1756295 FT /note="Match to PF00787 PX, PX domain Score 56.45" FT misc_feature 1756459..1756464 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1756522..1756535 FT /colour=6 FT /note="ctaacactttttag, splice branch and acceptor" FT misc_feature 1757270..1757275 FT /colour=6 FT /note="gtcatt, splice donor sequence" FT misc_feature 1757434..1757456 FT /colour=6 FT /note="ttaacctcgttgaacatacccag, splice branch and acceptor" FT CDS complement(1758387..1759013) FT /EC_number="2.5.1.9" FT /colour=7 FT /gene="SPCC1450.13c" FT /label=SPCC1450.13c FT /note="SPCC1450.13c, len:184, SIMILARITY:Saccharomyces FT cerevisiae, RISA_YEAST, riboflavin synthase alpha chain, FT (238 aa), fasta scores: opt: 582, E():1.5e-32, (52.5% FT identity in 181 aa)" FT /product="putative riboflavin synthase alpha chain; FT similar to S. cerevisiae RIB5" FT /fasta_file="fasta/c1450.tab.seq.05202.out" FT misc_feature complement(1758459..1758716) FT /colour=9 FT /note="Pfam match to entry PF00677 Lum_binding, Lumazine FT binding domain" FT misc_feature complement(1758753..1759007) FT /note="Match to PF00677 Lum_binding, Lumazine binding FT domain Score 89.97" FT CDS complement(join(1760195..1761898,1762017..1762028)) FT /colour=7 FT /gene="SPCC1450.14c" FT /label=SPCC1450.14c FT /note="SPCC1450.14c, len:571, SIMILARITY:Homo sapiens, FT AAF06104, ero1l, (385 aa), fasta scores: opt: 593, E():6e- FT 30, (35.2% identity in 392 aa)" FT /product="possibly required for protein disulfide bond FT formation in the endoplasmic reticulum; similar to S. FT cerevisiae ERO1" FT /fasta_file="fasta/c1450.tab.seq.05203.out" FT misc_feature complement(1761899..1761922) FT /colour=6 FT /note="ctgacatttttaaaataataatag, splice branch and FT acceptor" FT misc_feature complement(1762011..1762016) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS join(1762416..1762484,1762535..1763977) FT /colour=7 FT /gene="SPCC1450.15" FT /label=SPCC1450.15 FT /note="SPCC1450.15, len:503, SIMILARITY:Homo sapiens, FT FVT1_HUMAN, follicular variant translocation protein 1 , FT (332 aa), fasta scores: opt: 454, E():2.9e-22, (33.3% FT identity in 294 aa)" FT /product="putative short-chain dehydrogenase; possibly FT involved in glycosylphosphatidylinositol (GPI) synthesis; FT similar to H. sapiens PIG-F; similar to S. cerevisiae FT GPI11" FT /fasta_file="fasta/c1450.tab.seq.05204.out" FT misc_feature 1762485..1762490 FT /colour=6 FT /note="gtaact, splice donor sequence" FT misc_feature 1762522..1762534 FT /colour=6 FT /note="ctaacagtacaag, splice branch and acceptor" FT misc_feature 1762532..1763098 FT /note="Match to PF00106 adh_short, short chain FT dehydrogenase Score 85.08" FT CDS complement(1764397..1765938) FT /colour=10 FT /gene="SPCC1450.16c" FT /label=SPCC1450.16c FT /note="SPCC1450.16c, len:513, SIMILARITY:Saccharomyces FT cerevisiae, YK69_YEAST, hypothetical 102.7 kD protein in FT prp16-srp40 intergenic region., (910 aa), fasta scores: FT opt: 686, E():0, (30.7% identity in 495 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YKR089C" FT /fasta_file="fasta/c1450.tab.seq.05205.out" FT misc_feature 1766992..1767159 FT /colour=9 FT /note="Pfam match to entry PF00018 SH3, Src homology FT domain 3" FT misc_feature 1768444..1768611 FT /colour=9 FT /note="Pfam match to entry PF00618 RasGEFN, Guanine FT nucleotide exchange factor for Ras-like GTPases; N- FT terminal motif" FT misc_feature 1768933..1775135 FT /note="nominal overlap with cosmid SPCC1442, EM:AL031966 FT S.pombe chromosome 3" FT misc_feature 1768963..1769514 FT /colour=9 FT /note="Pfam match to entry PF00617 RasGEF, RasGEF domain" FT misc_feature 1770067..1770072 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1770105..1770123 FT /colour=6 FT /note="ctaataatgttgcaattag, splice branch and acceptor" FT misc_feature 1772446..1772694 FT /note="Match to PF00153 mito_carr, Mitochondrial carrier FT proteins Score 74.34" FT misc_feature 1772788..1772793 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1772891..1772910 FT /colour=6 FT /note="ctaacgagcgtttttcatag, splice branch and acceptor" FT misc_feature 1772911..1773249 FT /note="Match to PF00153 mito_carr, Mitochondrial carrier FT proteins Score 82.62" FT misc_feature 1773361..1773501 FT /note="Match to PF00153 mito_carr, Mitochondrial carrier FT proteins Score 36.11" FT misc_feature complement(1775100..1775135) FT /note="SPCC1442.04c see c1442 for full-length CDS" FT CDS complement(1775100..1776329) FT /colour=10 FT /gene="SPCC1442.04c" FT /label=SPCC1442.04c FT /note="SPCC1442.04c, len:409, SIMILARITY:to the C terminal FT of Saccharomyces cerevisiae, YGL250W, YGZA_YEAST, FT hypotheti cal 28.2 kD protein in hfm1-pde1 intergenic FT region., (245 a a), fasta scores: opt: 136, E():1.4e-05, FT (24.0% identity in 242 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YGL250W (at the C term)" FT /fasta_file="fasta/c1442.tab.seq.05031.out" FT misc_feature 1768933..1775135 FT /note="nominal overlap with cosmid SPCC1450, EM:AL049559 FT S. pombe chromosome 3" FT misc_feature 1768963..1769514 FT /colour=9 FT /note="Pfam match to entry PF00617 RasGEF, Guanine FT nucleoti de exchange factor for Ras-like small GTPases" FT misc_feature 1772431..1773126 FT /colour=9 FT /note="Pfam match to entry PF00153 mito_carr, FT Mitochondrial carrier proteins" FT misc_feature 1772788..1772793 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1772891..1772910 FT /colour=6 FT /note="ctaacgagcgtttttcatag, splice branch and acceptor" FT misc_feature 1773238..1773378 FT /colour=9 FT /note="Pfam match to entry PF00153 mito_carr, FT Mitochondrial carrier proteins" FT tRNA complement(1776892..1776973) FT /note="tRNA Ser anticodon AGA" FT CDS complement(1777494..1778027) FT /colour=10 FT /gene="SPCC1442.05c" FT /label=SPCC1442.05c FT /note="SPCC1442.05c, len:177," FT /product="hypothetical protein; similar to S. cerevisiae FT YGR235C" FT /fasta_file="fasta/c1442.tab.seq.05032.out" FT CDS join(1779056..1779170,1779267..1779370,1779440..1779594, FT 1779732..1780095) FT /EC_number="3.4.25.1" FT /colour=7 FT /gene="SPCC1442.06" FT /label=SPCC1442.06 FT /note="SPCC1442.06, len:245, SIMILARITY:Saccharomyces FT cerevisiae, YML092C, PRC3_YEAST, proteasome component y7, FT (250 a a), fasta scores: opt: 1072, E():0, (67.3% identity FT in 248 aa)" FT /product="20S proteasome component (alpha 2); similar to FT S. cerevisiae PRS4" FT /fasta_file="fasta/c1442.tab.seq.05033.out" FT misc_feature 1779152..1779613 FT /colour=9 FT /note="Pfam match to entry PF00227 proteasome, Proteasome FT A -type and B-type" FT misc_feature 1779171..1779176 FT /colour=6 FT /note="gtacta, splice donor sequence" FT misc_feature 1779252..1779266 FT /colour=6 FT /note="ctaacataattatag, splice branch and acceptor" FT misc_feature 1779371..1779376 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1779421..1779439 FT /colour=6 FT /note="ctaacggttttatgtacag, splice branch and acceptor" FT misc_feature 1779595..1779600 FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature 1779715..1779731 FT /colour=6 FT /note="ctaacttcattatttag, splice branch and acceptor" FT CDS complement(1780512..1781360) FT /colour=7 FT /gene="SPCC1442.07c" FT /label=SPCC1442.07c FT /note="SPCC1442.07c, len:282, LOW SIMILARITY:Saccharomyces FT cerevisiae, YHR134W, YHT4_YEAST, hypothetical 30.6 kD FT prote in in act5-yck1 intergenic region., (269 aa), fasta FT scores: opt: 181, E():0.0043, (28.5% identity in 144 aa)" FT /product="putative Zn-protease" FT /fasta_file="fasta/c1442.tab.seq.05034.out" FT misc_feature complement(1780722..1780769) FT /colour=9 FT /note="Pfam match to entry PF00099 zn-protease, zinc- FT bindin g metalloprotease domain" FT CDS complement(join(1782405..1782463,1782537..1782644, FT 1782730..1782814)) FT /colour=7 FT /gene="cox12" FT /gene="SPCC1442.08c" FT /label=cox12 FT /note="SPCC1442.08c, len:83, SIMILARITY:Saccharomyces FT cerev isiae, YLR038C, COXG_YEAST, cytochrome c oxidase FT polypeptid e vib, (82 aa), fasta scores: opt: 349, FT E():2.6e-31, (60.9% identity in 64 aa)" FT /product="putative cytochrome c oxidase subunit VIb" FT /fasta_file="fasta/c1442.tab.seq.05035.out" FT misc_feature complement(1782464..1782481) FT /colour=6 FT /note="ctaacaatgtttcgacag, splice branch and acceptor" FT misc_feature complement(1782531..1782536) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1782645..1782664) FT /colour=6 FT /note="ttaacacattgctacgatag, splice branch and acceptor" FT misc_feature complement(1782724..1782729) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS join(1784686..1784691,1784875..1786338) FT /colour=7 FT /gene="trp3" FT /gene="SPCC1442.09" FT /label=SPCC1442.09 FT /note="SPCC1442.09, len:489, SIMILARITY:Saccharomyces FT cerevisiae, YER090W, TRPE_YEAST, anthranilate synthase FT component i, (506 aa), fasta scores: opt: 1772, E():0, FT (58.7% identi ty in 499 aa)" FT /product="putative anthranilate synthase component i; FT similar to S. cerevisiae TRP2" FT /fasta_file="fasta/c1442.tab.seq.05036.out" FT misc_feature 1784692..1784697 FT /colour=6 FT /note="gtaatt, splice donor sequence" FT misc_feature 1784860..1784874 FT /colour=6 FT /note="ctaatactattttag, splice branch and acceptor" FT misc_feature 1785316..1786107 FT /colour=9 FT /note="Pfam match to entry PF00425 chorismate_bind, FT chorism ate binding enzyme" FT CDS complement(join(1786898..1787661,1787708..1787757, FT 1787800..1787879)) FT /EC_number="2.7.7.6" FT /colour=2 FT /gene="rpb3" FT /gene="SPCC1442.10c" FT /label=rpb3 FT /note="SPCC1442.10c, len:297" FT /product="DNA-directed RNA polymerase II subunit" FT /fasta_file="fasta/c1442.tab.seq.05037.out" FT misc_feature complement(1787662..1787676) FT /colour=6 FT /note="ctaatgatgttttag, splice branch and acceptor" FT misc_feature complement(1787702..1787707) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature complement(1787758..1787771) FT /colour=6 FT /note="ctaatagttgaaag, splice branch and acceptor" FT misc_feature complement(1787794..1787799) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS complement(1788902..1789450) FT /colour=8 FT /gene="SPCC1442.11c" FT /label=SPCC1442.11c FT /note="SPCC1442.11c, len:182" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1442.tab.seq.05038.out" FT tRNA 1789849..1789920 FT /note="tRNA Pro anticodon AGG" FT CDS join(1790496..1790617,1790705..1790936,1791220..1791618) FT /colour=7 FT /gene="SPCC1442.12" FT /label=SPCC1442.12 FT /note="SPCC1442.12, len:250, SIMILARITY:Saccharomyces FT cerev isiae, YER026C, PSS_YEAST, cdp-diacylglycerol-- FT serine o-pho sphatidyltransferase, (275 aa), fasta scores: FT opt: 771, E() :0, (54.6% identity in 211 aa)" FT /product="cdp-diacylglycerol--serine o- FT phosphatidyltransferase" FT /fasta_file="fasta/c1442.tab.seq.05039.out" FT misc_feature 1790618..1790623 FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature 1790687..1790704 FT /colour=6 FT /note="ctaactagaggattgtag, splice branch and acceptor" FT misc_feature 1790937..1790942 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1791208..1791219 FT /colour=6 FT /note="ctaacaaaatag, splice branch and acceptor" FT CDS complement(1792246..1792809) FT /colour=8 FT /gene="SPCC1442.13c" FT /label=SPCC1442.13c FT /note="SPCC1442.13c, len:187, FT SIMILARITY:Schizosaccharomyce s pombe, E1315387, FT hypothetical 79.1 kD protein., (695 aa), fasta scores: FT opt: 178, E():4.5e-06, (30.5% identity in 19 7 aa)" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1442.tab.seq.05040.out" FT CDS complement(1793737..1794138) FT /colour=10 FT /gene="SPCC1442.14c" FT /label=SPCC1442.14c FT /note="SPCC1442.14c, len:133, SIMILARITY:Saccharomyces FT cere visiae, YDL125C, HNT1_YEAST, hit family protein 1, FT (158 aa) , fasta scores: opt: 510, E():0, (53.8% identity FT in 132 aa)" FT /product="putative HIT-family protein; Zn-binding proteins FT and the histidine triad nucleotide-binding protein family; FT similar to S. cerevisiae HNT1" FT /fasta_file="fasta/c1442.tab.seq.05041.out" FT misc_feature complement(1793839..1794132) FT /colour=9 FT /note="Pfam match to entry PF01230 HIT, HIT family" FT CDS complement(1794666..1795274) FT /colour=7 FT /gene="SPCC1442.15c" FT /label=SPCC1442.15c FT /note="SPCC1442.15c, len:202, SIMILARITY:Homo sapiens, FT Q150 70, oxa1hs mRNA., (435 aa), fasta scores: opt: 216, FT E():1.2 e-15, (27.8% identity in 212 aa)" FT /product="putative cytochrome c oxidase biogenesis protein" FT /fasta_file="fasta/c1442.tab.seq.05042.out" FT misc_feature complement(1795906..1796865) FT /colour=9 FT /note="Pfam match to entry PF00107 adh_zinc, zinc binding FT d ehydrogenases" FT misc_feature 1796518..1798432 FT /note="nominal overlap with cosmid SPCC285, EM:AL031545 S. FT pombe chromosome 3" FT misc_feature complement(1797583..1797596) FT /colour=6 FT /note="ctaatcaattctag, splice branch and acceptor" FT misc_feature complement(1797652..1797657) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1797739..1797760) FT /colour=6 FT /note="ctaacttgtttattatttatag, splice branch and acceptor" FT misc_feature complement(1797802..1797807) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1796518..1798432 FT /note="nominal overlap with cosmid SPCC1442, EM:AL031966 FT S. pombe chromosome 3" FT misc_feature complement(1797583..1797596) FT /colour=6 FT /note="ctaatcaattctag, splice branch and acceptor" FT misc_feature complement(1797652..1797657) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1797739..1797760) FT /colour=6 FT /note="ctaacttgtttattatttatag, splice branch and acceptor" FT misc_feature complement(1797802..1797807) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS 1798892..1800706 FT /colour=7 FT /gene="SPCC285.03" FT /label=SPCC285.03 FT /note="SPCC285.03, len:604, similarity: YNR038W, FT SW:DBP6_YEAST, putative ATP-dependant RNA helicase (DPB6), FT fasta scor es, opt:494, (34.6% identity in 598 aa overlap)" FT /product="DEAD box ATP-dependent RNA helicase" FT /fasta_file="fasta/c285.tab.seq.04801.out" FT misc_feature 1799306..1800022 FT /note="Match to PF00270 DEAD, DEAD/DEAH box helicase Score FT 177.01" FT misc_feature 1800245..1800487 FT /colour=9 FT /note="Pfam match to entry PF00271 helicase_C, Helicases FT co nserved C-terminal domain" FT misc_feature 1800263..1800487 FT /note="Match to PF00271 helicase_C, Helicases conserved C- FT terminal domain Score 101.76" FT CDS 1801971..1802345 FT /colour=7 FT /gene="SPCC285.04" FT /label=SPCC285.04 FT /note="SPCC285.04, len:124, SIMILARITY:Caenorhabditis FT elegans., TTH2_CAEEL, hypothetical transthyretin-like FT protein zk697.8 in chromosome v., (190 aa), fasta scores: FT opt: 273, E():3.7e-12, (42.6% identity in 115 aa)" FT /product="putative transthyretin; possible small molecule FT transport; no apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c285.tab.seq.04802.out" FT misc_feature 1802007..1802330 FT /note="Match to PF00576 Transthyretin, Transthyretin FT (formerly prealbumin) Score 34.09" FT CDS 1803562..1804608 FT /colour=7 FT /gene="SPCC285.05" FT /label=SPCC285.05 FT /note="SPCC285.05, len:348, SIMILARITY:Candida albicans, FT O93844, purine nucleoside permease., (406 aa), fasta FT scores: opt: 842, E():0, (42.2% identity in 329 aa)" FT /product="putative purine transporter; no apparent S. FT cerevisiae ortholog" FT /fasta_file="fasta/c285.tab.seq.04803.out" FT CDS complement(join(1806069..1806142,1806199..1806252, FT 1806293..1806514,1806564..1806809,1806976..1807125, FT 1807311..1807350)) FT /colour=4 FT /gene="wtf4-pseudo" FT /gene="SPCC285.06c" FT /label=wtf4-pseudo FT /note="SPCC285.06c," FT /product="wtf-pseudo" FT /pseudo FT /fasta_file="fasta/c285.tab.seq.04804.out" FT misc_feature complement(1806143..1806156) FT /colour=6 FT /note="ctaattatttttag, splice branch and acceptor" FT misc_feature complement(1806193..1806198) FT /colour=6 FT /note="gtaaat, splice donor sequence" FT misc_feature complement(1806253..1806264) FT /colour=6 FT /note="ctaacgatatag, splice branch and acceptor" FT misc_feature complement(1806287..1806292) FT /colour=6 FT /note="gtttgt, splice donor sequence" FT misc_feature complement(1806515..1806526) FT /colour=6 FT /note="ctaactcattag, splice branch and acceptor" FT misc_feature complement(1806558..1806563) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1806810..1806822) FT /colour=6 FT /note="ttaatttaaacag, splice branch and acceptor" FT misc_feature complement(1806970..1806975) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature complement(1807126..1807151) FT /colour=6 FT /note="ttcacttgctattattgaaaaaacag, splice branch and FT accept or" FT misc_feature complement(1807305..1807310) FT /colour=6 FT /note="gtgagt, splice donor sequence" FT CDS complement(join(1807904..1808376,1808413..1808736, FT 1808785..1809057,1809296..1809434)) FT /colour=3 FT /gene="wtf5" FT /gene="SPCC285.07c" FT /label=wtf5 FT /note="SPCC285.07c, len:402," FT /product="hypothetical wtf protein" FT /fasta_file="fasta/c285.tab.seq.04805.out" FT misc_feature complement(1808377..1808387) FT /colour=6 FT /note="ctaacatacag, splice branch and acceptor" FT misc_feature complement(1808407..1808412) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1808737..1808748) FT /colour=6 FT /note="ctaactcattag, splice branch and acceptor" FT misc_feature complement(1808779..1808784) FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature complement(1809058..1809073) FT /colour=6 FT /note="ctaactataaatgcag, splice branch and acceptor" FT misc_feature complement(1809290..1809295) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT LTR complement(1809737..1810075) FT /colour=4 FT /note="tf2-type lone LTR" FT CDS join(1810265..1810267,1810312..1810351,1810410..1810813, FT 1810884..1811159) FT /colour=2 FT /gene="ret2" FT /gene="SPCC285.08" FT /label=ret2 FT /note="SPCC285.08, len:240, SIMILARITY:Saccharomyces FT cerevisiae, COPD_YEAST, coatomer delta subunit, (545 aa), FT fasta scores: opt: 643, E():7.4e-32, (48.4% identity in FT 248 aa)" FT /product="putative coatomer delta subunit; similar to S. FT cerevisiae RET2" FT /fasta_file="fasta/c285.tab.seq.04806.out" FT misc_feature 1810268..1810273 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 1810298..1810311 FT /colour=6 FT /note="ttaacaaagggtag, splice branch and acceptor" FT misc_feature 1810352..1810357 FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature 1810390..1810409 FT /colour=6 FT /note="cttacagtaaatttgtttag, splice branch and acceptor" FT misc_feature 1810814..1810819 FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature 1810868..1810883 FT /colour=6 FT /note="ctaatgcactttctag splice branch and acceptor" FT CDS complement(join(1811932..1812460,1812913..1813325, FT 1813372..1813380,1813442..1813531)) FT /EC_number="3.1.4.17" FT /colour=2 FT /gene="cgs2" FT /gene="SPCC285.09c" FT /gene="pde1" FT /label=cgs2 FT /note="SPCC285.09c, len:346" FT /product="3',5'-cyclic-nucleotide phosphodiesterase; cAMP FT phosphodiesterase class II; similar to S. cerevisiae PDE1" FT /fasta_file="fasta/c285.tab.seq.04807.out" FT misc_feature complement(1812461..1812475) FT /colour=6 FT /note="ctaacctctttttag, splice branch and acceptor" FT misc_feature complement(1812907..1812912) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1813326..1813337) FT /colour=6 FT /note="ctgacttattag, splice branch and acceptor" FT misc_feature complement(1813366..1813371) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature complement(1813381..1813399) FT /colour=6 FT /note="ctaacgttaacgaaaacag, splice branch and acceptor" FT misc_feature complement(1813436..1813441) FT /colour=6 FT /note="gtatga, splice donor sequence" FT CDS complement(1815235..1816383) FT /colour=10 FT /gene="SPCC285.10c" FT /label=SPCC285.10c FT /note="SPCC285.10c, len:382, SIMILARITY:Saccharomyces FT cerevisiae, YM40_YEAST, hypothetical 62.5 kD protein in FT ald5-ddr48 intergenic region., (550 aa), fasta scores: FT opt: 284, E():3e-10, (36.7% identity in 300 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YMR171C; contains SPRY domain; predicted N-terminal signal FT sequence" FT /fasta_file="fasta/c285.tab.seq.04808.out" FT misc_feature complement(1815535..1815894) FT /colour=9 FT /note="Pfam match to entry PF00622 SPRY, Domain in SPla FT and the RYanodine Receptor" FT misc_feature complement(1815541..1815885) FT /note="Match to PF00622 SPRY, SPRY domain Score 46.36" FT CDS join(1817002..1817109,1817297..1818472) FT /colour=10 FT /gene="SPCC285.11" FT /label=SPCC285.11 FT /note="SPCC285.11, len:427, SIMILARITY:Homo sapiens, FT O94963, kiaa0887 protein, (443 aa), fasta scores: opt: 434, FT E():1.9e-19, (26.9% identity in 417 aa)" FT /product="hypothetical protein; UBX domain; present in FT ubiquitin-regulatory proteins" FT /fasta_file="fasta/c285.tab.seq.04809.out" FT misc_feature 1817110..1817115 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1817278..1817296 FT /colour=6 FT /note="ctaactgttttatgattag, splice branch and acceptor" FT misc_feature 1818149..1818460 FT /note="Match to PF00789 UBX, UBX domain Score 64.72" FT CDS join(1819324..1819373,1819428..1819719) FT /colour=2 FT /gene="lsm7" FT /gene="SPCC285.12" FT /label=lsm7 FT /note="SPCC285.12, len:113, SIMILARITY:Homo sapiens, FT AAD56231, u6 snRNA-associated sm-like protein lsm7., (103 FT aa), fasta scores: opt: 378, E():6.1e-20, (59.8% identity FT in 97 aa)" FT /product="U6 snRNA-associated protein; putative pre-mRNA FT splicing factor; contains Sm domain; similar to S. FT cerevisiae LSM7" FT /fasta_file="fasta/c285.tab.seq.04810.out" FT misc_feature 1819374..1819379 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT intron 1819374..1819427 FT /note="confirmed by mRNA" FT misc_feature 1819411..1819427 FT /colour=6 FT /note="ctaactttcttaaatag, splice branch and acceptor" FT misc_feature 1819453..1819671 FT /note="Match to PF01423 Sm, Sm protein Score 89.66" FT CDS complement(1820017..1822227) FT /colour=8 FT /gene="SPCC285.13c" FT /label=SPCC285.13c FT /note="SPCC285.13c, len:736, SIMILARITY:Saccharomyces FT cerevisiae, AMYH_YEAST, glucoamylase s1/s2 , (1367 aa), FT fasta scores: opt: 312, E():3.9e-09, (23.3% identity in FT 748 aa)" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c285.tab.seq.04811.out" FT CDS join(1824274..1824301,1824351..1824577,1824666..1826336, FT 1826381..1826806,1826849..1827949) FT /colour=7 FT /gene="SPCC285.14" FT /label=SPCC285.14 FT /note="SPCC285.14, len:1150, SIMILARITY:Homo sapiens, FT AAB58468, gt334 protein., (1259 aa), fasta scores: opt: FT 184, E():0.0005, (21.0% identity in 806 aa)" FT /product="putative TRAPP (Transport protein Particle) FT complex; possibly involved in vesicular transport between FT the ER and the Golgi; similar to S. cerevisiae TRS130" FT /fasta_file="fasta/c285.tab.seq.04812.out" FT misc_feature 1824302..1824307 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1824332..1824350 FT /colour=6 FT /note="ctaatgaagtgctgtttag, splice branch and acceptor" FT misc_feature 1824578..1824583 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1824648..1824665 FT /colour=6 FT /note="ctaacattgtaaaaaaag, splice branch and acceptor" FT misc_feature 1826337..1826342 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1826365..1826380 FT /colour=6 FT /note="ttaacaatggaaatag, splice branch and acceptor" FT misc_feature 1826807..1826812 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1826835..1826848 FT /colour=6 FT /note="ctaaccttatttag, splice branch and acceptor" FT CDS complement(join(1828004..1828142,1828193..1828260)) FT /colour=2 FT /gene="rps28-2" FT /gene="SPCC285.15c" FT /label=rps28-2 FT /note="SPCC285.15c, len:68" FT /product="40S ribosomal protein S28" FT /fasta_file="fasta/c285.tab.seq.04813.out" FT misc_feature complement(join(1828007..1828142,1828193..1828260)) FT /note="Match to PF01200 Ribosomal_S28e, Ribosomal protein FT S28e Score 145.46" FT misc_feature complement(1828143..1828157) FT /colour=6 FT /note="ctaatattgatacag, splice branch and acceptor" FT intron complement(1828143..1828192) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(1828187..1828192) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS complement(join(1828702..1831872,1831988..1832581)) FT /colour=2 FT /gene="msh6" FT /gene="SPCC285.16c" FT /label=msh6 FT /note="SPCC285.16c, len:1254," FT /product="MutS family; DNA mismatch repair protein" FT /fasta_file="fasta/c285.tab.seq.04814.out" FT misc_feature complement(1828864..1829604) FT /note="Match to PF00488 MutS_C, DNA mismatch repair FT proteins, mutS family Score 346.61" FT misc_feature complement(1829857..1831338) FT /note="Match to PF01624 MutS_N, MutS family, N-terminal FT putative DNA-binding domain Score 356.72" FT misc_feature complement(1831873..1831887) FT /colour=6 FT /note="ctaacaatatgctag, splice branch and acceptor" FT intron complement(1831873..1831987) FT /note="confirmed by mRNA" FT misc_feature complement(1831982..1831987) FT /colour=6 FT /note="gtatgg, splice donor sequence" FT CDS join(1832883..1833075,1833148..1833359,1833493..1833642, FT 1833814..1833960) FT /colour=10 FT /gene="SPCC285.17" FT /label=SPCC285.17 FT /note="SPCC285.17, len:233, SIMILARITY:Saccharomyces FT cerevisiae, YM74_YEAST, hypothetical 26.5 kD protein, (226 FT aa), fasta scores: opt: 382, E():1.6e-15, (33.2% identity FT in 214 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YMR233W - which interacts with rad51(sprhp51) and top1p; FT contains SWIB domain" FT /fasta_file="fasta/c285.tab.seq.04815.out" FT misc_feature 1833076..1833081 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 1833132..1833147 FT /colour=6 FT /note="ttaaccaaacttgtag, splice branch and acceptor" FT misc_feature 1833360..1833365 FT /colour=6 FT /note="gtaagg, splice donor sequence" FT misc_feature 1833480..1833492 FT /colour=6 FT /note="ctaactaacgtag, splice branch and acceptor" FT misc_feature 1833643..1833648 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1833798..1833813 FT /colour=6 FT /note="ctaacttaattaatag, splice branch and acceptor" FT misc_feature 1834244..1836513 FT /note="nominal overlap with cosmid SPCC1223, EM:AL031579 FT S. pombe chromosome 3" FT misc_feature 1835610..1835615 FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature 1835640..1835654 FT /colour=6 FT /note="ttaacacatttcaag, splice branch and acceptor" FT misc_feature 1835853..1835858 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1835898..1835910 FT /colour=6 FT /note="ctaacttaattag, splice branch and acceptor" FT misc_feature 1836023..1836100 FT /colour=9 FT /note="Pfam match to entry PF00096 zf-C2H2, zinc finger, FT C2 H2 type" FT misc_feature 1836245..1836316 FT /colour=9 FT /note="Pfam match to entry PF00096 zf-C2H2, zinc finger, FT C2 H2 type" FT misc_feature 1836351..1836419 FT /note="Match to PF00096 zf-C2H2, zinc finger, C2H2 type FT Score 22.18" FT misc_feature 1834244..1836513 FT /note="nominal overlap with cosmid SPCC285, EM:AL031545 S. FT pombe chromosome 3" FT misc_feature 1835610..1835615 FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature 1835641..1835654 FT /colour=6 FT /note="ttaacacatttcaag, splice branch and acceptor" FT misc_feature 1835853..1835858 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1835898..1835910 FT /colour=6 FT /note="ctaacttaattag, splice branch and acceptor" FT misc_feature 1836351..1836419 FT /note="Match to zf-C2H2 Score 22.18" FT CDS 1839385..1840425 FT /colour=2 FT /gene="thi3" FT /gene="nmt1" FT /gene="SPCC1223.02" FT /label=thi3 FT /note="SPCC1223.02, len:346" FT /product="pyrimidine biosynthesis enzyme thi3" FT /fasta_file="fasta/c1223.tab.seq.04775.out" FT CDS complement(1841587..1843536) FT /EC_number="1.1.99.5" FT /colour=2 FT /gene="gut2" FT /gene="SPCC1223.03c" FT /label=gut2 FT /note="SPCC1223.03c, len:649" FT /product="glycerol-3-phosphate dehydrogenase; FT mitochondrial" FT /fasta_file="fasta/c1223.tab.seq.04776.out" FT misc_feature complement(1841662..1843341) FT /note="Match to PF01224 FAD_Gly3P_dh, FAD-dependent FT glycerol-3-phosphate dehydrogenase Score 683.55" FT tRNA 1845539..1845610 FT /note="tRNA His anticodon GTG, Cove score 52.82" FT CDS complement(join(1845860..1846873,1846963..1847094)) FT /colour=10 FT /gene="SPCC1223.04c" FT /label=SPC1223.04c FT /note="SPCC1223.04c, len:381, FT SIMILARITY:Schizosaccharomyces pombe, O74738, conserved FT hypothetical protein, (547 aa), fasta scores: opt: 216, FT E():4.7e-07, (24.3% identity in 259 aa)" FT /product="conserved protein; Pfam-B_2703; putative FT methyltransferase" FT /fasta_file="fasta/c1223.tab.seq.04777.out" FT misc_feature complement(1846874..1846886) FT /colour=6 FT /note="ttaactatattag, splice branch and acceptor" FT misc_feature complement(1846957..1846962) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT CDS complement(join(1848418..1848458,1848519..1848753)) FT /colour=2 FT /gene="rpl37-2" FT /gene="SPCC1223.05c" FT /label=rpl37-2 FT /note="SPPCC1223.05c, len:91" FT /product="60S ribosomal protein L37" FT /fasta_file="fasta/c1223.tab.seq.04778.out" FT misc_feature complement(1848459..1848477) FT /colour=6 FT /note="ctaacaaaattttatttag, splice branch and acceptor" FT intron complement(1848459..1848518) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(1848513..1848518) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1848589..1848750) FT /note="Match to PF01224 Ribosomal_L37e, FAD-dependent FT glycerol-3-phosphate dehydrogenase Score 152.71" FT CDS 1849918..1853361 FT /colour=2 FT /gene="tea1" FT /gene="SPCC1223.06" FT /label=tea1 FT /note="SPCC1223.06, len:1147" FT /product="cell polarity protein; tip elongation aberrant FT protein 1" FT /fasta_file="fasta/c1223.tab.seq.04779.out" FT misc_feature 1850677..1850826 FT /note="Match to PF01344 Kelch, Kelch motif Score 30.91" FT CDS complement(join(1853612..1855277,1855336..1855412)) FT /colour=7 FT /gene="SPCC1223.07c" FT /label=SPCC1223.07c FT /note="SPCC1223.07c, len:580, SIMILARITY:Saccharomyces FT cerevisiae, SYDC_YEAST, YLL018c, aspartyl-tRNA synthetase, FT cytoplasmic, (556 aa), fasta scores: opt: 1118, E():0, FT (56.5% identity in 584 aa)" FT /product="aspartyl-tRNA synthetase, cytoplasmic" FT /fasta_file="fasta/c1223.tab.seq.04780.out" FT misc_feature complement(1853627..1854658) FT /note="Match to tRNA-synt_2 Score 446.29" FT misc_feature complement(1854770..1855147) FT /note="Match to PF01336 Aspartyl_tRNA_N, Aspartyl-tRNA FT synthetase (AspRS), N terminus Score 163.56" FT misc_feature complement(1855278..1855296) FT /colour=6 FT /note="ctaaccatcacatttgtag, splice branch and acceptor" FT misc_feature complement(1855330..1855335) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS join(1856369..1856402,1856605..1857956) FT /EC_number="1.5.1.3" FT /colour=2 FT /gene="dfr1" FT /gene="SPCC1223.08c" FT /label=dfr1 FT /note="SPCC1223.08c, len:461" FT /product="dihydrofolate reductase" FT /fasta_file="fasta/c1223.tab.seq.04781.out" FT misc_feature 1856403..1856408 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT intron 1856403..1856604 FT /note="confirmed by mRNA" FT misc_feature 1856585..1856604 FT /colour=6 FT /note="ttaactcgtgtcctatgtag, splice branch and acceptor" FT misc_feature 1857273..1857764 FT /note="Match to PF00186 DiHfolate_red, Dihydrofolate FT reductase Score 288.64" FT CDS complement(1858243..1859133) FT /EC_number="1.7.3.3" FT /colour=7 FT /gene="SPCC1223.09" FT /label=SPCC1223.09 FT /note="SPCC1223.09c, len:296, SIMILARITY:Emericella FT nidulans, URIC_EMENI, uricase, (301 aa), fasta scores: FT opt: 893, E():0, (49.3% identity in 288 aa)" FT /product="uricase; no apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c1223.tab.seq.04782.out" FT misc_feature complement(1858246..1859115) FT /note="Match to PF01014 Uricase, Uricase Score 376.49" FT misc_feature 1859119..1861612 FT /note="putative gene free region" FT CDS complement(join(1861667..1862158,1862283..1862369, FT 1862729..1862749)) FT /colour=9 FT /gene="SPCC1223.10c" FT /label=SPCC1223.10c FT /note="SPCC1223.10c, len:220" FT /product="very hypothetical protein" FT /fasta_file="fasta/c1223.tab.seq.04783.out" FT misc_feature complement(1862159..1862175) FT /colour=6 FT /note="ctaacattaggcattag, splice branch and acceptor" FT misc_feature complement(1862277..1862282) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1862370..1862392) FT /colour=6 FT /note="ctaatgtatatcttcattggtag, splice branch and acceptor" FT misc_feature complement(1862723..1862728) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT LTR complement(1862927..1863284) FT /colour=4 FT /note="lone tf1-type LTR" FT tRNA 1864031..1864102 FT /note="tRNA Gln anticodon TTG, Cove score 54.89" FT CDS 1864657..1865769 FT /EC_number="3.1.3.16" FT /colour=2 FT /gene="ptc2" FT /gene="SPCC1223.11" FT /label=ptc2 FT /note="SPCC1223.11, len:370" FT /product="serine/threonine protein phosphatase; member of FT the PP2C family; possibly involved in pre-mRNA splicing" FT /fasta_file="fasta/c1223.tab.seq.04784.out" FT misc_feature 1864720..1865490 FT /note="Match to PF00481 PP2C, protein phosphatase 2C Score FT 423.28" FT misc_feature 1866186..1867321 FT /note="putative RNA gene as region contains many stop FT codon s but corresponds to previous entry EM:SPAB1021 FT AB001021 Schizosaccharomyces pombe mRNA encoding 37 a.a. FT protein, comp lete cds but doubtful that really encodes a FT 37aa protein" FT CDS complement(1869380..1870630) FT /colour=2 FT /gene="meu10" FT /gene="SPCC1223.12c" FT /label=meu10 FT /note="SPCC1223.12c, len:416, FT SIMILARITY:Schizosaccharomyces pombe, O13960, hypothetical FT 43.4 kD protein c23h4.19 in chromosome i ., (421 aa), FT fasta scores: opt: 848, E():0, (35.9% identity in 396 aa)" FT /product="possibly involved in cell wall structure or FT biosynthesis; by similarity; meiotic expression FT upregulated; required for spore wall formation (PMID: FT 11895484)" FT /fasta_file="fasta/c1223.tab.seq.04785.out" FT CDS 1872650..1875541 FT /colour=8 FT /gene="SPCC1223.13" FT /label=SPCC1223.13 FT /note="SPCC1223.13, low similarity: H. sapiens, tr:O08674, FT TRANSCRIPTION FACTOR RBP-L, len:(515 aa), fasta scores, FT opt :137, E():5.9e-10, (24.9% identity in 429 aa overlap)" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1223.tab.seq.04786.out" FT misc_feature 1877469..1877569 FT /note="nominal overlap with cosmid SPCC297, EM:AL049609 S. FT pombe chromosome 3" FT misc_feature 1877469..1877569 FT /note="nominal overlap with cosmid SPCC1223, EM:AL031579 FT S. pombe chromosome 3" FT misc_feature 1879092..1879370 FT /note="SPCC297.02, len:92- not considered coding- CDS FT removed" FT CDS 1879614..1881572 FT /colour=2 FT /gene="ssp1" FT /gene="SPCC297.03" FT /label=ssp1 FT /note="SPCC297.03, len:652" FT /product="serine/threonine protein kinase; mediates a FT rapid osmotic stress response at the cell surface; member FT of the ELM kinase family" FT /fasta_file="fasta/c297.tab.seq.05223.out" FT CDS complement(join(1882216..1882626,1882940..1882972)) FT /colour=10 FT /gene="SPCC297.04c" FT /label=SPCC297.04c FT /note="SPCC297.04c, len:147, SIMILARITY:Paramecium FT bursaria chlorella virus 1, O41094, a612l protein., (119 FT aa), fasta scores: opt: 153, E():0.00014, (28.3% identity FT in 120 aa)" FT /product="SET domain protein" FT /fasta_file="fasta/c297.tab.seq.00006.out" FT misc_feature complement(1882627..1882638) FT /colour=6 FT /note="ctaacgctttag, splice branch and acceptor" FT intron complement(1882627..1882939) FT /colour=2 FT /note="confirmed" FT misc_feature complement(1882934..1882939) FT /colour=6 FT /note="gtaagg, splice donor sequence" FT misc_feature 1886440..1887003 FT /note="nominal overlap with cosmid SPCC737, EM:AL031546 S. FT pombe chromosome 3" FT CDS 1883668..1886589 FT /colour=7 FT /gene="SPCC297.05" FT /label=SPCC297.05 FT /note="SPCC297.05, len:973, SIMILARITY:Homo sapiens, FT O75064, kiaa0476 protein., (1386 aa), fasta scores: opt: FT 251, E():3.2e-08, (24.0% identity in 321 aa)" FT /product="DENN domain protein; putative small GTP binding FT protein; no apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c297.tab.seq.05225.out" FT misc_feature 1886440..1886589 FT /note="SPCC297.05; see c297 for full-length CDS" FT misc_feature 1886440..1887003 FT /note="nominal overlap with cosmid SPCC297, EM:AL049609 S. FT pombe chromosome 3" FT CDS complement(1888442..1888855) FT /EC_number="1.10.2.2" FT /colour=7 FT /gene="qcr7" FT /gene="SPCC737.02c" FT /label=qcr7 FT /note="SPCC737.02c, len:137, SIMILARITY:Kluyveromyces FT lacti s, UCR7_KLULA, ubiquinol-cytochrome c reductase FT complex 14 kD protein, (127 aa), fasta scores: opt: 399, FT E():2.6e-21, (52.9% identity in 121 aa)" FT /product="putative ubiquinol cytochrome c reductase FT complex subunit ( cytochrome bc1 complex ); respiratory FT complex III" FT /fasta_file="fasta/c737.tab.seq.04479.out" FT CDS complement(1889525..1891372) FT /colour=8 FT /gene="SPCC737.03c" FT /label=SPCC737.03c FT /note="SPCC737.03c, len:615" FT /product="hypothetical protein; sequence orphan; contains FT 6 predicted transmembrane helices" FT /fasta_file="fasta/c737.tab.seq.04480.out" FT CDS 1892997..1894262 FT /colour=12 FT /gene="B8647-5" FT /gene="SPCC737.04" FT /label=B8647-5 FT /note="SPCC737.04, len:421, SIMILARITY:Schizosaccharomyces FT pombe, O13699, hypothetical 50.4 kD protein c11g7.06c in FT ch romosome i., (430 aa), fasta scores: opt: 447, E():3e- FT 21, ( 26.8% identity in 365 aa)" FT /product="Pfam-B_8647 domain; possibly S. pombe specific" FT /fasta_file="fasta/c737.tab.seq.04481.out" FT LTR 1895123..1895453 FT /colour=4 FT /note="Tf2-type LTR" FT CDS 1895965..1896759 FT /colour=8 FT /gene="SPCC737.05" FT /note="SPCC737.05, len:264aa" FT /product="hypothetical protein; sequence orphan; contains FT predicted N-terminal signal sequence; contains 2 predicted FT transmembrane helices" FT /fasta_file="fasta/c737.tab.seq.04482.out" FT CDS complement(join(1897174..1897204,1897246..1897828, FT 1897971..1898115,1898224..1898328)) FT /colour=7 FT /gene="SPCC737.06c" FT /label=SPCC737.06c FT /note="SPCC737.06c, len:287, SIMILARITY:Rattus norvegicus, FT GSH0_RAT, glutamate--cysteine ligase regulatory subunit, FT (2 74 aa), fasta scores: opt: 256, E():1.7e-09, (29.8% FT identit y in 141 aa)" FT /product="putative glutamate--cysteine ligase regulatory s FT ubunit" FT /fasta_file="fasta/c737.tab.seq.04483.out" FT misc_feature complement(1897829..1897842) FT /colour=6 FT /note="ctaactttgcgtag, splice branch and acceptor" FT misc_feature complement(1897965..1897970) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1898116..1898130) FT /colour=6 FT /note="ctaacatatttctag, splice branch and acceptor" FT misc_feature complement(1898218..1898223) FT /colour=6 FT /note="gtaagc, splice donor sequence" FT CDS complement(join(1899051..1900581,1900633..1900869, FT 1900928..1901100,1901148..1901189)) FT /colour=7 FT /gene="SPCC737.07c" FT /label=SPCC737.07c FT /note="SPCC737.07c, len:660, SIMILARITY:Arabidopsis FT thalian a, O81047, putative DNA-binding protein, (635 aa), FT fasta sc ores: opt: 1007, E():0, (38.2% identity in 638 FT aa)" FT /product="putative DNA-binding protein" FT /fasta_file="fasta/c737.tab.seq.04484.out" FT misc_feature complement(1900317..1900340) FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature complement(1900582..1900596) FT /colour=6 FT /note="ctgacagttgaaaag, splice branch and acceptor" FT misc_feature complement(1900627..1900632) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1900870..1900889) FT /colour=6 FT /note="ttaactcatttaatttgtag, splice branch and acceptor" FT misc_feature complement(1900922..1900927) FT /colour=6 FT /note="gtacat, splice donor sequence" FT misc_feature complement(1901101..1901114) FT /colour=6 FT /note="ttaataatggtcag, splice branch and acceptor" FT misc_feature complement(1901142..1901147) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS 1901404..1915557 FT /colour=10 FT /gene="SPCC737.08" FT /label=SPCC737.08 FT /note="SPCC737.08, len:4717, SIMILARITY:Saccharomyces FT cerev isiae, Q12019, similarity near n-terminus to s. FT cerevisiae dynein heavy chain, (4910 aa), fasta scores: FT opt: 6106, E() :0, (36.5% identity in 4790 aa)" FT /product="predicted coiled-coil protein; putative motor FT protein; similar to dynein; 5 ATP binding sites, and EF FT hand calcium binding domain; similar to S. cerevisiae FT YLR106C - null lethal" FT /fasta_file="fasta/c737.tab.seq.04485.out" FT misc_feature 1902823..1902846 FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 1904104..1904127 FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 1904980..1905003 FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 1906099..1906122 FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 1907029..1907052 FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 1910791..1910829 FT /colour=8 FT /note="PS00018 EF-hand calcium-binding domain" FT misc_feature complement(1915939..1916493) FT /colour=9 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporte rs" FT misc_feature complement(1916449..1916472) FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature complement(1916707..1917345) FT /colour=9 FT /note="Pfam match to entry PF00664 ABC_membrane, ABC FT transp orter transmembrane region" FT misc_feature 1917108..1917347 FT /note="nominal overlap with cosmid SPCC74, EM:AL031543 FT S.pombe chromosome 3" FT misc_feature 1917108..1917347 FT /note="nominal overlap with cosmid SPCC737, EM:AL031546 FT S.pombe chromosome 3" FT misc_feature complement(1918123..1918138) FT /colour=6 FT /note="ctaatttcatttttag, splice branch and acceptor" FT intron complement(1918123..1918244) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(1918239..1918244) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT CDS 1920182..1922146 FT /colour=10 FT /gene="SPCC74.09" FT /label=SPCC74.09 FT /note="SPCC74.09, len:653, SIMILARITY:Schizosaccharomyces FT pombe, NRD1_SCHPO, negative regulator of differentiation FT 1.negative regulator of differentiation 1., (529 aa), FT fasta scores: opt: 871, E():0, (31.6% identity in 516 aa)" FT /product="RNA-binding protein" FT /fasta_file="fasta/c74.tab.seq.04725.out" FT misc_feature 1921082..1921243 FT /note="Match to PF00076 rrm, RNA recognition motif. FT (a.k.a. RRM, RBD, or RNP domain) Score 61.56" FT misc_feature 1921082..1921249 FT /colour=9 FT /note="Pfam match to entry PF00076 rrm, RNA recognition FT mot if. (aka RRM, RBD, or RNP domain)" FT misc_feature 1921700..1921849 FT /note="Match to PF00076 rrm, RNA recognition motif. FT (a.k.a. RRM, RBD, or RNP domain) Score 28.09" FT CDS join(1924097..1924148,1924212..1924480,1924582..1925669, FT 1925712..1925820,1925874..1926275) FT /colour=2 FT /gene="sly1" FT /gene="SPCC74.01" FT /label=sly1 FT /note="SPCC74.01, len:638, SIMILARITY:Arabidopsis thaliana, FT AAD20128, putative sec1 family transport protein., (627 FT aa), fasta scores: opt: 1123, E():0, (34.8% identity in FT 638 aa)" FT /product="stxbp-unc-18-sec1 family vesicle trafficking FT protein" FT /fasta_file="fasta/c74.tab.seq.04726.out" FT misc_feature 1924149..1924154 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1924195..1924211 FT /colour=6 FT /note="ctaatatgaacctttag, splice branch and acceptor" FT misc_feature 1924481..1924486 FT /colour=6 FT /note="gtatgg, splice donor sequence" FT misc_feature 1924566..1924581 FT /colour=6 FT /note="ctaacatattttaaag, splice branch and acceptor" FT misc_feature join(1924591..1925669,1925712..1925794,1925893..1926260) FT /note="Match to PF00995 Sec1, Sec1 family Score 306.84" FT misc_feature 1925670..1925675 FT /colour=6 FT /note="gtatac, splice donor sequence" FT misc_feature 1925701..1925711 FT /colour=6 FT /note="ctaacttatattag, splice branch and acceptor" FT misc_feature 1925821..1925826 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 1925860..1925873 FT /colour=6 FT /note="ttaattgtttttag, splice branch and acceptor" FT CDS complement(join(1926646..1928317,1928369..1928579, FT 1928700..1928780,1928939..1929107)) FT /colour=8 FT /gene="SPCC74.02c" FT /label=SPCC74.02c FT /note="SPCC74.02c, len:709, SIMILARITY:Sus scrofa, Q29071, FT gastric mucin, (528 aa), fasta scores: opt: 191, FT E():0.0044, (24.2% identity in 417 aa)" FT /product="hypothetical serine-rich protein; sequence FT orphan; agglutinin-like" FT /fasta_file="fasta/c74.tab.seq.04727.out" FT misc_feature complement(1928318..1928334) FT /colour=6 FT /note="ctaacgaagcgccttag, splice branch and acceptor" FT intron complement(1928318..1928368) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(1928363..1928368) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1928580..1928595) FT /colour=6 FT /note="ctaatatttatcttag, splice branch and acceptor" FT misc_feature complement(1928694..1928699) FT /colour=6 FT /note="gtatat, splice donor sequence" FT misc_feature complement(1928781..1928797) FT /colour=6 FT /note="ctaattgttgcccttag, splice branch and acceptor" FT misc_feature complement(1928933..1928938) FT /colour=6 FT /note="gtatgc, splice donor sequence" FT CDS complement(join(1930717..1931714,1931765..1932116, FT 1932325..1932557,1932610..1932757)) FT /colour=7 FT /gene="SPCC74.03c" FT /label=SPCC74.03c FT /note="SPCC74.03c, len:576, SIMILARITY:Saccharomyces FT cerevi siae, SNF1_YEAST, carbon catabolite derepressing FT protein ki nase, (633 aa), fasta scores: opt: 1355, E():0, FT (46.4% iden tity in 608 aa)" FT /note="SPCC74.03c, len:575, SIMILARITY:Candida tropicalis, FT SNF1_CANTR, carbon catabolite derepressing protein kinase, FT (619 aa), fasta scores: opt: 1412, E():0, (47.9% identity FT in 587 aa)" FT /product="putative carbon catabolite derepressing protein FT kinase; serine/threonine protein kinase" FT /fasta_file="fasta/c74.tab.seq.04728.out" FT misc_feature complement(1931593..1931688) FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain Score 30.45" FT misc_feature complement(1931715..1931728) FT /colour=6 FT /note="ctaaacgtatttag, splice branch and acceptor" FT misc_feature complement(1931759..1931764) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(1931796..1932119) FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain Score 164.39" FT misc_feature complement(1932006..1932044) FT /colour=8 FT /note="PS00108 Serine/Threonine protein kinases active- FT site signature" FT misc_feature complement(1932117..1932132) FT /colour=6 FT /note="ctgactgtttttaaag, splice branch and acceptor" FT misc_feature complement(1932319..1932324) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(join(1932319..1932557,1932610..1932658)) FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain Score 84.05" FT misc_feature complement(1932558..1932572) FT /colour=6 FT /note="ctaacgtacttgtag, splice branch and acceptor" FT misc_feature complement(1932604..1932609) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature complement(1933674..1933823) FT /note="Short duplicated region associated with LTR;1485 FT 1634 SPCC622 S. pombe chromosome 3" FT LTR complement(1933957..1934298) FT /colour=4 FT /note="partially degraded Tf2-type LTR" FT CDS 1937730..1939403 FT /colour=7 FT /gene="SPCC74.04" FT /label=SPCC74.04 FT /note="SPCC74.04, len:557, SIMILARITY:Schizosaccharomyces FT p ombe, YAHB_SCHPO, hypothetical amino-acid permease FT c8a4.11, (544 aa), fasta scores: opt: 1987, E():0, (53.7% FT identity in 534 aa)" FT /note="SPCC74.04, len:556, SIMILARITY:Schizosaccharomyces FT pombe, CAB63537, amino-acid permease., (567 aa), fasta FT scores: opt: 2304, E():0, (62.5% identity in 520 aa)" FT /product="APC amino acid transporter" FT /fasta_file="fasta/c74.tab.seq.04729.out" FT misc_feature 1937883..1939304 FT /colour=9 FT /note="Pfam match to entry PF00324 aa_permeases, Amino FT acid permease" FT misc_feature join(1940165..1940191,1940261..1940641) FT /note="Match to PF01777 Ribosomal_L27e, Ribosomal L27e FT protein family Score 312.30" FT CDS join(1940165..1940191,1940261..1940644) FT /colour=2 FT /gene="rpl27-2" FT /gene="SPCC74.05" FT /label=rpl27-2 FT /note="SPCC74.05, len:136" FT /product="60S ribosomal protein L27" FT /fasta_file="fasta/c74.tab.seq.04730.out" FT misc_feature 1940192..1940197 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT intron 1940192..1940260 FT /colour=2 FT /note="confirmed intron" FT misc_feature 1940245..1940260 FT /colour=6 FT /note="ctaacgaaacgttcag, splice branch and acceptor" FT CDS 1941349..1948383 FT /colour=2 FT /gene="mak3" FT /gene="SPCC74.06" FT /label=mak3 FT /note="SPCC74.06, len:2343, SIMILARITY:Schizosaccharomyces FT pombe, O14002, putative sensor-like histidine kinase FT c27e2.09, (2310 aa), fasta scores: opt: 1776, E():0, FT (25.2% identity in 2403 aa)" FT /product="putative sensory transduction histidine kinase" FT /fasta_file="fasta/c74.tab.seq.04731.out" FT misc_feature 1946539..1946664 FT /note="Match to PF00785 PAC, PAC motif Score 33.18" FT misc_feature 1946731..1947354 FT /note="Match to PF00512 signal, Histidine kinase Score FT 20.71" FT misc_feature 1947979..1948335 FT /note="Match to PF00072 response_reg, Response regulator FT receiver domain Score 97.90" FT misc_feature 1949472..1952744 FT /note="nominal overlap with cosmid SPCC18, EM:AL031907 FT S.pombe chromosome 3" FT misc_feature 1949472..1952744 FT /note="nominal overlap with cosmid SPCC74, EM:AL031543 S. FT pombe chromosome 3" FT CDS 1954555..1955901 FT /colour=7 FT /gene="SPCC18.02" FT /label=SPCC18.02 FT /note="SPCC18.02, len:448, SIMILARITY:Drosophila FT melanogaster, O17444, vesicular acetylcholine transporter, FT (578 aa), fasta scores: opt: 273, E():3.5e-10, (23.9% FT identity in 443 aa)" FT /product="MFS amine transporter" FT /fasta_file="fasta/c18.tab.seq.04869.out" FT CDS 1956664..1959897 FT /colour=7 FT /gene="SPCC18.03" FT /label=SPCC18.03 FT /note="SPCC18.03, len:1077, SIMILARITY:Drosophila FT melanogas ter, STC_DROME, shuttle craft protein., (1106 FT aa), fasta sc ores: opt: 775, E():0, (34.1% identity in FT 880 aa)" FT /note="SPCC18.03, len:1077, SIMILARITY:Saccharomyces FT cerevisiae, YNC3_YEAST, hypothetical 108.5 kD protein in FT ume3-hda1 intergenic region., (965 aa), fasta scores: opt: FT 1628, E():0, (34.1% identity in 933 aa)" FT /product="shuttle craft like transcriptional regulator FT with 8 zf-NF-X1 zinc fingers and R3H domain" FT /fasta_file="fasta/c18.tab.seq.04870.out" FT misc_feature 1957534..1957587 FT /note="Match to PF01422 zf-NF-X1, zinc finger Score 36.46" FT misc_feature 1957705..1957758 FT /note="Match to PF01422 zf-NF-X1, zinc finger Score 35.66" FT misc_feature 1957921..1957956 FT /note="Match to PF01422 zf-NF-X1, zinc finger Score 27.07" FT misc_feature 1958116..1958172 FT /note="Match to PF01422 zf-NF-X1, zinc finger Score 35.00" FT misc_feature 1958284..1958322 FT /note="Match to PF01422 zf-NF-X1, zinc finger Score 26.58" FT misc_feature 1958446..1958505 FT /note="Match to PF01422 zf-NF-X1, zinc finger Score 36.83" FT misc_feature 1958794..1958850 FT /note="Match to PF01422 zf-NF-X1, zinc finger Score 28.42" FT misc_feature 1958878..1958943 FT /note="Match to PF01422 zf-NF-X1, zinc finger Score 20.21" FT misc_feature 1959184..1959339 FT /note="Match to PF01424 R3H, R3H domain Score 75.18" FT CDS join(1961030..1963377,1963428..1963698) FT /colour=2 FT /gene="pof6" FT /gene="SPCC18.04" FT /label=pof6 FT /note="SPCC18.04, len:872, SIMILARITY:Saccharomyces FT cerevis iae, P87193, orf yjl204c, (193 aa), fasta scores: FT opt: 442, E():2.9e-22, (36.5% identity in 192 aa)" FT /note="SPCC18.04, len:872, SIMILARITY:Yarrowia lipolytica, FT O93954, sls2 protein, (937 aa), fasta scores: opt: 698, FT E():0, (28.2% identity in 896 aa)" FT /product="F-box protein; possibly involved in endocytic FT membrane traffic and recycling out of an early endosome; FT similar to S. cerevisiae RCY1" FT /fasta_file="fasta/c18.tab.seq.04871.out" FT misc_feature 1963378..1963383 FT /colour=6 FT /note="gtgaga, splice donor sequence" FT misc_feature 1963414..1963427 FT /colour=6 FT /note="ctgactcattttag, splice branch and acceptor" FT CDS complement(join(1964008..1964619,1964670..1964966, FT 1965025..1965420,1965471..1965674)) FT /colour=7 FT /gene="SPCC18.05c" FT /note="SPCC18.05c, len:502, SIMILARITY:Saccharomyces FT cerevisiae, YCW2_YEAST, hypothetical 57.0 kD trp-asp FT repeats containing protein, (515 aa), fasta scores: opt: FT 1989, E():0, (56.2% identity in 516 aa)" FT /product="WD repeat protein; notchless-like" FT /fasta_file="fasta/c18.tab.seq.04872.out" FT misc_feature complement(1964014..1964112) FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 45.60" FT misc_feature complement(1964140..1964256) FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 43.14" FT misc_feature complement(1964266..1964379) FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 43.04" FT misc_feature complement(1964521..1964619) FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 21.47" FT misc_feature complement(1964620..1964631) FT /colour=6 FT /note="ctaattttgaag, splice branch and acceptor" FT misc_feature complement(1964664..1964669) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1964679..1964777) FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 42.42" FT misc_feature complement(1964802..1964912) FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 32.66" FT misc_feature complement(1964967..1964979) FT /colour=6 FT /note="ctaatatttttag, splice branch and acceptor" FT misc_feature complement(1965019..1965024) FT /colour=6 FT /note="gtgagt, splice donor sequence" FT misc_feature complement(1965022..1965123) FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 46.85" FT misc_feature complement(1965136..1965252) FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 40.32" FT misc_feature complement(1965421..1965438) FT /colour=6 FT /note="ctaacataatcctcacag, splice branch and acceptor" FT misc_feature complement(1965465..1965470) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT CDS complement(1966739..1967737) FT /colour=7 FT /gene="SPCC18.06c" FT /label=SPCC18.06c FT /note="SPCC18.06c, len:332, SIMILARITY:Mus musculus, FT CAF1_MOUSE, ccr4-associated factor 1, (285 aa), fasta FT scores: opt: 973, E():0, (55.6% identity in 277 aa)" FT /product="putative CCR4-Not complex; similar to S. FT cerevisiae carbon catabolite repressor protein 4 FT component; similar to mouse CAF1 ccr4-associated factor 1" FT /fasta_file="fasta/c18.tab.seq.04873.out" FT CDS 1970237..1971229 FT /colour=2 FT /gene="rpc53" FT /gene="SPCC18.07" FT /label=rpc53 FT /note="SPCC18.07, len:330" FT /product="DNA directed RNA polymerase III subunit" FT /fasta_file="fasta/c18.tab.seq.04874.out" FT CDS 1971917..1973512 FT /colour=7 FT /gene="SPCC18.08" FT /label=SPCC18.08 FT /note="SPCC18.08, len:531, SIMILARITY:Synechocystis sp., FT SYK_SYNY3, lysyl-tRNA synthetase, (510 aa), fasta scores: FT opt: 973, E():0, (36.1% identity in 513 aa)" FT /product="lysyl-tRNA synthetase, cytoplasmic" FT /fasta_file="fasta/c18.tab.seq.04875.out" FT misc_feature 1972460..1973491 FT /note="Match to PF00152 tRNA-synt_2, tRNA synthetases FT class II (D, K and N) Score 333.41" FT CDS complement(join(1973657..1974327,1974563..1974590)) FT /colour=10 FT /gene="SPCC18.09c" FT /label=SPCC18.09c FT /note="SPCC18.09c, len:232, SIMILARITY:Saccharomyces FT cerevisiae, Q08702, chromosome xv reading frame orf FT yor258w., (217 aa), fasta scores: opt: 242, E():2.1e-09, FT (34.3% identity in 210 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YOR258W" FT /fasta_file="fasta/c18.tab.seq.04876.out" FT misc_feature complement(1974328..1974347) FT /colour=6 FT /note="ctaatcttgtttttgcatag, splice branch and acceptor" FT misc_feature complement(1974557..1974562) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS join(1975671..1975724,1975770..1975878,1976021..1976327, FT 1976419..1976971) FT /colour=7 FT /gene="SPCC18.10" FT /label=SPCC18.10 FT /note="SPCC18.10, len:340, SIMILARITY:Schizosaccharomyces FT pombe, O14242, putative pyridoxine kinase, (309 aa), fasta FT scores: opt: 646, E():0, (36.8% identity in 321 aa)" FT /product="pyridoxine-pyridoxal-pyridoxamine kinase" FT /fasta_file="fasta/c18.tab.seq.04877.out" FT misc_feature 1975725..1975730 FT /colour=6 FT /note="gtttgt, splice donor sequence" FT misc_feature 1975754..1975769 FT /colour=6 FT /note="ctcacaattccaacag, splice branch and acceptor" FT misc_feature 1975879..1975884 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1976005..1976020 FT /colour=6 FT /note="ctaaccgaatgaacag, splice branch and acceptor" FT misc_feature 1976328..1976333 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1976402..1976418 FT /colour=6 FT /note="ctaacagtctctcatag, splice branch and acceptor" FT CDS complement(join(1976923..1977163,1977248..1977336)) FT /colour=10 FT /gene="SPCC18.11c" FT /label=SPCC18.11c FT /note="SPCC18.11c, len:109, SIMILARITY:Caenorhabditis FT elegans., DP30_CAEEL, dpy-30 protein., (123 aa), fasta FT scores: opt: 179, E():0.00018, (44.4% identity in 63 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YDR469W" FT /fasta_file="fasta/c18.tab.seq.04878.out" FT misc_feature complement(1977164..1977179) FT /colour=6 FT /note="ctaactgatggaacag, splice branch and acceptor" FT misc_feature complement(1977242..1977247) FT /colour=6 FT /note="gtaagc, splice donor sequence" FT CDS complement(join(1978123..1978727,1978912..1979001, FT 1979114..1979201)) FT /colour=7 FT /gene="SPCC18.12c" FT /label=SPCC18.12c FT /note="SPCC18.12c, len:260, SIMILARITY:Saccharomyces FT cerevisiae, Q12339, chromosome xv reading frame orf FT yor004w., (254 aa), fasta scores: opt: 574, E():5.5e-29, FT (46.6% identity in 262 aa)" FT /product="tRNA synthetase class II (D K N), cytoplasmic" FT /fasta_file="fasta/c18.tab.seq.04879.out" FT misc_feature complement(join(1978477..1978727,1978912..1978972)) FT /note="Match to PF00152 DUF94, tRNA synthetases class II FT (D, K and N) Score 20.84" FT misc_feature complement(1978728..1978741) FT /colour=6 FT /note="ctaactgactatag, splice branch and acceptor" FT misc_feature complement(1978906..1978911) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1979002..1979017) FT /colour=6 FT /note="ctaacatgatttttag, splice branch and acceptor" FT misc_feature complement(1979108..1979113) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS join(1979795..1980474,1980548..1981133) FT /colour=10 FT /gene="SPCC18.13" FT /label=SPCC18.13 FT /note="SPCC18.13, len:421, SIMILARITY:Saccharomyces FT cerevisiae, Q03774, hypothetical 50.5 kD protein., (444 FT aa), fasta scores: opt: 297, E():4.2e-12, (26.6% identity FT in 369 aa)" FT /product="WD repeat protein" FT /fasta_file="fasta/c18.tab.seq.04880.out" FT misc_feature 1979987..1980064 FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 26.59" FT misc_feature 1980475..1980480 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1980531..1980547 FT /colour=6 FT /note="ctaacgccttttcctag, splice branch and acceptor" FT misc_feature 1980543..1980626 FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 22.23" FT CDS complement(join(1981529..1981681,1982006..1982791)) FT /colour=2 FT /gene="rpp0" FT /gene="SPCC18.14c" FT /label=rpp0 FT /note="SPCC18.14c, len:312, SIMILARITY:Saccharomyces FT cerevisiae, RLA0_YEAST, 60s acidic ribosomal protein p0, FT (312 aa), fasta scores: opt: 1217, E():0, (60.0% identity FT in 310 aa)" FT /product="putative 60s acidic ribosomal protein p0" FT /fasta_file="fasta/c18.tab.seq.04881.out" FT misc_feature complement(1981532..1981669) FT /note="Match to PF00428 60s_ribosomal, 60s Acidic FT ribosomal protein Score 76.04" FT misc_feature complement(1981682..1981696) FT /colour=6 FT /note="ctaactttattttag, splice branch and acceptor" FT misc_feature complement(1982000..1982005) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(1982477..1982785) FT /colour=9 FT /note="Pfam match to entry PF00466 L10, Ribosomal protein FT L 10" FT misc_feature complement(1982492..1982779) FT /note="Match to PF00466 Ribosomal_L10, Ribosomal protein FT L10 Score 130.34" FT CDS join(1984272..1984447,1985026..1985782) FT /colour=10 FT /gene="SPCC18.15" FT /label=SPCC18.15 FT /note="SPCC18.15, len:310, SIMILARITY:Saccharomyces FT cerevisiae, YB96_YEAST, hypothetical 43.3 kD protein, (387 FT aa), fasta scores: opt: 206, E():5.4e-07, (30.2% identity FT in 367 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YBR246W" FT /fasta_file="fasta/c18.tab.seq.04882.out" FT misc_feature 1984448..1984453 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 1985010..1985025 FT /colour=6 FT /note="ctaattcatcttatag, splice branch and acceptor" FT CDS complement(1986351..1986842) FT /colour=7 FT /gene="SPCC18.16c" FT /label=SPCC18.16c FT /note="SPCC18.16c, len:163, SIMILARITY:Arabidopsis FT thaliana, O65412, hypothetical 31.5 kD protein., (282 aa), FT fasta scores: opt: 482, E():2e-26, (49.4% identity in 160 FT aa)" FT /product="putative riboflavin kinase; similar to s. FT cerevisiae FMN1" FT /fasta_file="fasta/c18.tab.seq.04883.out" FT misc_feature complement(1986408..1986779) FT /note="Match to PF01687 FAD_Synth, Riboflavin kinase / FAD FT synthetase Score 142.65" FT CDS complement(1987573..1989039) FT /colour=8 FT /gene="SPCC18.17c" FT /label=SPCC18.17c FT /note="SPCC18.17c, len:488" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c18.tab.seq.04884.out" FT misc_feature complement(1989558..1989773) FT /note="Match to PF00206 lyase_1, Lyase Score 53.96" FT misc_feature 1989702..1989776 FT /note="nominal overlap with cosmid SPCC290, EM:AL035260 S. FT pombe chromosome 3" FT misc_feature 1989702..1989776 FT /note="nominal overlap with cosmid SPCC18, EM:AL031907 S. FT pombe chromosome 3" FT misc_feature complement(1989747..1990898) FT /note="Match to lyase_1, Score 619.53" FT CDS join(1993666..1993901,1994076..1994745) FT /EC_number="2.7.7.6" FT /colour=2 FT /gene="rpc34" FT /gene="SPCC290.02" FT /label=rpc34 FT /note="SPCC290.02, len:301" FT /product="DNA-directed RNA polymerase III subunit" FT /fasta_file="fasta/c290.tab.seq.05089.out" FT misc_feature 1993902..1993907 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 1994057..1994075 FT /colour=6 FT /note="ctaacattcttctttttag, splice branch and acceptor" FT CDS complement(join(1995222..1995481,1995533..2000216)) FT /colour=7 FT /gene="SPCC290.03c" FT /label=SPCC290.03c FT /note="SPCC290.03c, len:1647, SIMILARITY:Saccharomyces FT cere visiae, YJL039C, YJD9_YEAST, hypothetical 191.5 kD FT protein in nsp1-kar2 intergenic region., (1683 aa), fasta FT scores: o pt: 130, E():1.5e-19, (21.7% identity in 1714 FT aa)" FT /product="Nuclear pore protein (nucleoporin); possibly FT located at the inner site of nuclear pores; similar to S. FT cerevisiae NUP192" FT /fasta_file="fasta/c290.tab.seq.05090.out" FT misc_feature complement(1995482..1995496) FT /colour=6 FT /note="ctaatcgcaatttag, splice branch and acceptor" FT intron complement(1995482..1995532) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(1995527..1995532) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 2002248..2002352 FT /note="nominal overlap with cosmid SPCC4F11, EM:AL117389 FT S. pombe chromosome 3" FT misc_feature 2002248..2002352 FT /note="nominal overlap with cosmid SPCC290, EM:AL035260 S. FT pombe chromosome 3" FT misc_feature 2002308..2002328 FT /colour=6 FT /note="ctaatgtttgtctgtgtttag" FT CDS 2005579..2006622 FT /EC_number="3.1.3.16" FT /colour=2 FT /gene="ptc1" FT /gene="SPCC4F11.02" FT /label=ptc1 FT /note="SPCC4F11.02, len:347" FT /product="protein phosphatase 2c homolog 1" FT /fasta_file="fasta/c4F11.tab.seq.05241.out" FT CDS complement(2007632..2008639) FT /colour=8 FT /gene="SPCC4F11.03c" FT /label=SPCC4F11.03c FT /note="SPCC4F11.03c, len:335, shows similar to FG repeat FT units of GLFG family of nucleoporins FT SIMILARITY:Saccharomyces cerevisiae, N100_YEAST, FT nucleoporin nup100/nsp100, (959 aa), fasta scores: opt: FT 159, E():0.026, (26.9% identity in 264 aa)" FT /note="putative alteRNAtive inframe intron at 5894..5962, FT does not improve homology" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c4F11.tab.seq.05242.out" FT intron complement(2008141..2008209) FT /colour=7 FT /note="Intron predicted by HMM_intron, Score=6.47" FT CDS complement(2009059..2010096) FT /colour=7 FT /gene="SPCC4F11.04c" FT /label=SPCC4F11.04c FT /note="SPCC4F11.04c, len:349, FT SIMILARITY:Schizosaccharomyces pombe, YD6B_SCHPO, FT hypothetical 42.2 kD protein c17g8.11c in chromosome i, FT (356 aa), fasta scores: opt: 969, E():0, (51.4% identity FT in 259 aa)" FT /product="putative transferase; possibly involved in the FT production of sphingolipids" FT /fasta_file="fasta/c4F11.tab.seq.05243.out" FT misc_RNA 2010524..2011129 FT /note="putative non-coding RNA; meu20" FT misc_RNA 2011161..2011474 FT /colour=3 FT /note="mRNA from spc02023 314 1" FT CDS join(2011402..2011501,2011547..2011689) FT /colour=9 FT /gene="SPCC4F11.05" FT /note="SPCC4F11.05, len:80" FT /product="very hypothetical protein" FT /fasta_file="fasta/c4F11.tab.seq.05244.out" FT misc_feature 2012474..2012625 FT /note="nominal overlap with cosmid SPCC1906, EM:AL031538 FT S. pombe chromosome 3" FT misc_feature 2012474..2012625 FT /note="nominal overlap with cosmid SPCC4F11, EM:AL117389 FT S. pombe chromosome 3" FT intron 2013514..2013729 FT /note="confirmed intron" FT CDS 2013742..2014833 FT /EC_number="2.7.7.13" FT /colour=7 FT /gene="SPCC1906.01" FT /label=SPCC1906.01 FT /note="SPCC1906.01, len:362, SIMILARITY:Trichoderma reesei, FT O74624, mannose-1-phosphate guanyltransferase, (364 aa), FT fasta scores: opt: 1881, E():0, (76.1% identity in 364 aa)" FT /product="mannose-1-phosphate guanyltransferase" FT /fasta_file="fasta/c1906.tab.seq.04605.out" FT misc_feature 2013745..2014449 FT /note="Match to PF00483 NTP_transferase, Nucleotidyl FT transferase Score 265.87" FT misc_feature 2014513..2014599 FT /colour=8 FT /note="PS00101 Hexapeptide-repeat containing-transferases FT signature" FT misc_feature 2014513..2014605 FT /colour=9 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT trans ferase hexapeptide (four repeats)" FT CDS complement(2015733..2017478) FT /colour=10 FT /gene="SPCC1906.02c" FT /label=SPCC1906.02c FT /note="SPCC1906.02c, len:581aa, low similarity: YGL110C, FT YG L0_YEAST, P53137, hypothetical 72.0 kD protein, (624aa), FT fa sta scores, opt:211, E():4.8e-05, (24.3% identity in FT 416 aa overlap)" FT /product="hypothetical protein; similar to S. cerevisiae FT YGL110C" FT /fasta_file="fasta/c1906.tab.seq.04606.out" FT LTR complement(2017904..2018245) FT /colour=4 FT /note="tf2-type LTR" FT CDS join(2018617..2018752,2018968..2019297,2019347..2019724, FT 2019761..2019952,2019993..2020055,2020106..2020188) FT /colour=3 FT /gene="wtf1" FT /gene="SPCC1906.03" FT /label=wtf1 FT /note="SPCC1906.03" FT /product="hypothetical wtf protein" FT /fasta_file="fasta/c1906.tab.seq.04607.out" FT misc_feature 2018753..2018758 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2018956..2018967 FT /colour=6 FT /note="ctaacaatatag, splice branch and acceptor" FT misc_feature 2019298..2019303 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT intron 2019298..2019346 FT /note="confirmed intron" FT misc_feature 2019335..2019346 FT /colour=6 FT /note="ctaactcattag, splice branch and acceptor" FT misc_feature 2019725..2019730 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT intron 2019725..2019760 FT /note="confirmed intron" FT misc_feature 2019750..2019760 FT /colour=6 FT /note="ctgacaaacag, splice branch and acceptor" FT misc_feature 2019953..2019958 FT /colour=6 FT /note="gttcgt, splice donor sequence" FT intron 2019953..2019992 FT /note="confirmed intron" FT misc_feature 2019980..2019992 FT /colour=6 FT /note="ctaaccatgccag, splice branch and acceptor" FT misc_feature 2020056..2020061 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT intron 2020056..2020105 FT /note="confirmed intron" FT misc_feature 2020093..2020105 FT /colour=6 FT /note="cttacccgattag, splice branch and acceptor" FT CDS join(2021101..2021239,2021478..2021750,2021799..2022032, FT 2022073..2022126,2022181..2022257) FT /colour=3 FT /gene="wtf6" FT /gene="SPCC1906.04" FT /label=wtf6 FT /note="SPCC1906.04," FT /product="hypothetical wtf protein" FT /fasta_file="fasta/c1906.tab.seq.04608.out" FT misc_feature 2021240..2021245 FT /colour=6 FT /note="gtaaga, splice branch and acceptor" FT misc_feature 2021462..2021477 FT /colour=6 FT /note="ctaactataaatgcag, splice donor sequence" FT misc_feature 2021751..2021756 FT /colour=6 FT /note="gtaagc, splice branch and acceptor" FT misc_feature 2021787..2021798 FT /colour=6 FT /note="ctaactcatcag, splice donor sequence" FT misc_feature 2022033..2022038 FT /colour=6 FT /note="gtttgt, splice branch and acceptor" FT misc_feature 2022061..2022072 FT /colour=6 FT /note="ctaacgatatag, splice donor sequence" FT misc_feature 2022127..2022132 FT /colour=6 FT /note="gtaaat, splice branch and acceptor" FT misc_feature 2022167..2022180 FT /colour=6 FT /note="ctaatcatcattag, splice donor sequence" FT LTR complement(2022839..2023190) FT /colour=4 FT /note="tf2-type LTR" FT misc_feature 2026600..2026605 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 2026693..2026707 FT /colour=6 FT /note="ctaactttgatttag, splice branch and acceptor" FT misc_feature 2027544..2027725 FT /note="nominal overlap with cosmid SPCC1739 EM:AL031540 S. FT pombe chromosome 3" FT misc_feature 2027544..2027725 FT /note="nominal overlap with c1906 S. pombe chromosome 3" FT CDS complement(2029181..2029930) FT /colour=7 FT /gene="SPCC1739.02c" FT /label=SPCC1739.02c FT /note="SPCC1739.02c, len:248, SIMILARITY:Saccharomyces FT cerevisiae, YNR7_YEAST, hypothetical 34.9 kD protein, (309 FT aa), fasta scores: opt: 239, E():2.2e-08, (28.1% identity FT in 203 aa)" FT /product="conserved protein; similar to S. cerevisiae FT YNL177C" FT /fasta_file="fasta/c1739.tab.seq.04575.out" FT CDS join(2030555..2032892,2032934..2033395,2033438..2033685) FT /colour=7 FT /gene="SPCC1739.03" FT /label=SPCC1739.03 FT /note="SPCC1739.03, len:1014, SIMILARITY:Caenorhabditis FT elegans., Q23388, zk1067.2 protein., (2219 aa), fasta FT scores: opt: 674, E():0, (25.6% identity in 1119 aa)" FT /product="possibly involved in decay of mRNA containing FT nonsense codons; similar to S. cerevisiae NAM7" FT /fasta_file="fasta/c1739.tab.seq.04576.out" FT misc_feature 2031731..2031754 FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature 2032893..2032898 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2032920..2032933 FT /colour=6 FT /note="ctaacagaccttag, splice branch and acceptor" FT misc_feature 2033396..2033401 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2033423..2033437 FT /colour=6 FT /note="ttaacatattatcag, splice branch and acceptor" FT CDS complement(join(2033932..2034445,2034497..2034774, FT 2034832..2034906)) FT /colour=8 FT /gene="SPCC1739.04c" FT /label=SPCC1739.04c FT /note="SPCC1739.04c," FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1739.tab.seq.04577.out" FT misc_feature complement(2034446..2034463) FT /colour=6 FT /note="ctaaccctgttgatacag, splice branch and acceptor" FT misc_feature complement(2034491..2034496) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(2034775..2034790) FT /colour=6 FT /note="ctaacaatggttgcag, splice branch and acceptor" FT misc_feature complement(2034826..2034831) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS 2036661..2037620 FT /colour=10 FT /gene="SPCC1739.05" FT /label=SPCC1739.05 FT /note="SPCC1739.05," FT /product="putative SET domain protein" FT /fasta_file="fasta/c1739.tab.seq.04578.out" FT tRNA 2038252..2038322 FT /note="tRNA Gly anticodon TCC, Cove score 55.00" FT CDS complement(2038852..2040342) FT /colour=7 FT /gene="SPCC1739.06c" FT /label=SPCC1739.06c FT /note="SPCC1739.06c, len:495, SIMILARITY:Saccharomyces FT cerevisiae, SUMT_YEAST, putative uroporphyrin-iii c- FT methyltransferase, (593 aa), fasta scores: opt: 926, E():0, FT (37.9% identity in 496 aa)" FT /product="putative uroporphyrin methyltransferase; similar FT to S. cerevisiae MET1" FT /fasta_file="fasta/c1739.tab.seq.04579.out" FT misc_feature complement(2038936..2039565) FT /colour=9 FT /note="Pfam match to entry PF00590 TP_methylase, FT Tetrapyrro le (Corrin/Porphyrin) Methylases" FT LTR 2041688..2042041 FT /colour=4 FT /note="tf2-type LTR" FT CDS 2042184..2042585 FT /colour=7 FT /gene="SPCC1739.07" FT /label=SPCC1739.07 FT /note="SPCC1739.07, len:132, SIMILARITY:Mus musculus, FT O35473, small unique nuclear receptor co-repressor., (141 FT aa), fasta scores: opt: 181, E():7.7e-05, (29.5% identity FT in 129 aa)" FT /product="similar to DNA-binding protein c1D" FT /fasta_file="fasta/c1739.tab.seq.04580.out" FT CDS complement(2044182..2044967) FT /colour=7 FT /gene="SPCC1739.08c" FT /label=SPCC1739.08c FT /note="SPCC1739.08c, len:260, FT SIMILARITY:Schizosaccharomyces pombe, O13908, hypothetical FT 27.9 kD protein c22a12.17c in chromosome i., (261 aa), FT fasta scores: opt: 855, E():0, (51.5% identity in 262 aa)" FT /product="short chain dehydrogenase; putative sorbitol FT utilization" FT /fasta_file="fasta/c1739.tab.seq.04581.out" FT misc_feature complement(2044206..2044298) FT /colour=9 FT /note="Pfam match to entry PF00678 adh_short_C2, Short FT chai n dehydrogenase/reductase C-terminus" FT misc_feature complement(2044347..2044904) FT /colour=9 FT /note="Pfam match to entry PF00106 adh_short, FT Alcohol/other dehydrogenases, short chain type" FT CDS complement(join(2047561..2047600,2047685..2047744, FT 2047797..2047851,2047900..2047949,2048000..2048024, FT 2048073..2048235)) FT /EC_number="1.9.3.1" FT /colour=7 FT /gene="cox13" FT /gene="SPCC1739.09c" FT /label=cox13 FT /note="SPCC1739.09c, len:130, similarity: YGL191W, FT COXE_YEA ST, CYTOCHROME C OXIDASE POLYPEPTIDE VIA FT PRECURSOR, (129aa) , fasta scores, opt:291,E():3.5e-14, FT (37.9% identity in 124 aa overlap)" FT /note="SPCC1739.09c, len:129, SIMILARITY:Saccharomyces FT cerevisiae, COXE_YEAST, cytochrome c oxidase polypeptide FT via , (129 aa), fasta scores: opt: 291, E():1.5e-14, FT (37.9% identity in 124 aa)" FT /product="putative cytochrome c oxidase subunit VIa; FT similar to S. cerevisiae COX13" FT /fasta_file="fasta/c1739.tab.seq.04582.out" FT misc_feature complement(2047601..2047614) FT /colour=6 FT /note="ctaatgatatacag, splice branch and acceptor" FT intron complement(2047601..2047684) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(2047679..2047684) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature complement(2047745..2047760) FT /colour=6 FT /note="ctaatgaatggtttag, splice branch and acceptor" FT intron complement(2047745..2047796) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(2047791..2047796) FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature complement(2047852..2047865) FT /colour=6 FT /note="ctaacaagagatag, splice branch and acceptor" FT intron complement(2047852..2047899) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(2047894..2047899) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature complement(2047950..2047963) FT /colour=6 FT /note="ctaacatttgccag, splice branch and acceptor" FT intron complement(2047950..2047999) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(2047994..2047999) FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature complement(2048025..2048039) FT /colour=6 FT /note="ctaacgggtttatag, splice branch and acceptor" FT misc_feature complement(2048067..2048072) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS 2048836..2049846 FT /colour=7 FT /gene="SPCC1739.10" FT /label=SPCC1739.10 FT /note="SPCC1739.10, len:335, SIMILARITY:Emericella FT nidulans, O93956, pali protein., (601 aa), fasta scores: FT opt: 371, E():2.1e-15, (25.7% identity in 339 aa)" FT /product="putative signal transduction component protein" FT /fasta_file="fasta/c1739.tab.seq.04583.out" FT CDS complement(2050315..2053452) FT /colour=2 FT /gene="cdc11" FT /gene="SPCC1739.11c" FT /label=cdc11 FT /note="SPCC1739.11c, len:1044, SIMILARITY:Caenorhabditis FT elegans., YNZ9_CAEEL, hypothetical 37.4 kD protein t09a5.9 FT in chromosome iii., (326 aa), fasta scores: opt: 326, FT E():2.8e-11, (27.2% identity in 261 aa)" FT /product="involved in cytokinesis and septation; leucine FT repeat containing; provides an anchor for septation FT initiation proteins on the spindle pole body; similar to FT S. cerevisiae NUD1" FT /fasta_file="fasta/c1739.tab.seq.04584.out" FT misc_feature complement(2050552..2050713) FT /colour=9 FT /note="Pfam match to entry PF00560 LRR, Leucine Rich FT Repeat (2 copies)" FT misc_feature complement(2050714..2050851) FT /colour=9 FT /note="Pfam match to entry PF00560 LRR, Leucine Rich FT Repeat (2 copies)" FT misc_feature complement(2051044..2051181) FT /colour=9 FT /note="Pfam match to entry PF00560 LRR, Leucine Rich FT Repeat (2 copies)" FT misc_feature complement(2051182..2051316) FT /colour=9 FT /note="Pfam match to entry PF00560 LRR, Leucine Rich FT Repeat (2 copies)" FT misc_feature complement(2051317..2051448) FT /colour=9 FT /note="Pfam match to entry PF00560 LRR, Leucine Rich FT Repeat (2 copies)" FT misc_feature complement(2051449..2051574) FT /colour=9 FT /note="Pfam match to entry PF00560 LRR, Leucine Rich FT Repeat (2 copies)" FT CDS 2054518..2055435 FT /EC_number="3.1.3.16" FT /colour=2 FT /gene="ppe1" FT /gene="SPCC1739.12" FT /gene="esp1" FT /gene="ppx1" FT /label=ppe1 FT /note="SPCC1739.12, len:305" FT /product="serine/threonine protein phosphatase" FT /fasta_file="fasta/c1739.tab.seq.04585.out" FT misc_feature 2054527..2055384 FT /colour=9 FT /note="Pfam match to entry PF00149 STphosphatase, Ser/Thr FT p rotein phosphatases" FT CDS 2058143..2060086 FT /colour=2 FT /gene="hsp70" FT /gene="SPCC1739.13" FT /label=hsp70 FT /note="SPCC1739.13, len:647" FT /product="heat shock protein 70 family" FT /fasta_file="fasta/c1739.tab.seq.04586.out" FT misc_feature 2058152..2059972 FT /colour=9 FT /note="Pfam match to entry PF00012 HSP70, Heat shock hsp70 FT proteins" FT CDS join(2060829..2061052,2061215..2063792) FT /colour=2 FT /gene="npp106" FT /gene="SPCC1739.14" FT /label=npp106 FT /note="SPCC1739.14, len:933" FT /product="nucleoporin complex subunit" FT /fasta_file="fasta/c1739.tab.seq.04587.out" FT misc_feature 2061053..2061058 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2061201..2061214 FT /colour=6 FT /note="ttaactcaatctag, splice branch and acceptor" FT LTR 2064691..2065040 FT /colour=4 FT /note="tf1-type LTR" FT CDS join(2065352..2065490,2065658..2065903,2065951..2066196, FT 2066233..2066424,2066465..2066527,2066578..2066681) FT /colour=3 FT /gene="wtf3" FT /gene="SPCC1739.15" FT /label=wtf3 FT /note="SPCC1739.15, len:328" FT /product="hypothetical wtf protein" FT /fasta_file="fasta/c1739.tab.seq.04588.out" FT misc_feature 2065491..2065496 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 2065645..2065657 FT /colour=6 FT /note="ttaatttaaacag, splice branch and acceptor" FT misc_feature 2065904..2065909 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2065939..2065950 FT /colour=6 FT /note="ctaactcattag, splice branch and acceptor" FT misc_feature 2066197..2066202 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT intron 2066197..2066232 FT /note="confirmed by mRNA" FT misc_feature 2066222..2066232 FT /colour=6 FT /note="ctgataaacag, splice branch and acceptor" FT misc_feature 2066425..2066430 FT /colour=6 FT /note="gttcgt, splice donor sequence" FT intron 2066425..2066464 FT /note="confirmed by mRNA" FT misc_feature 2066452..2066464 FT /colour=6 FT /note="ctaaccatgccag, splice branch and acceptor" FT misc_feature 2066528..2066533 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 2066565..2066577 FT /colour=6 FT /note="cttacccgactag, splice branch and acceptor" FT misc_feature 2067228..2067324 FT /note="485 (+1) 39685 39781 SPCC1739 S. pombe chromosome 3" FT misc_feature 2068505..2069018 FT /note="region of G-C/(G+C) strandswitch" FT CDS 2070706..2072199 FT /colour=7 FT /gene="SPCPB1C11.01" FT /label=SPCPB1C11.01 FT /product="putative ammonium transporter, by similar to S. FT cerevisiae MEP genes" FT /fasta_file="fasta/pB1C11.tab.seq.05349.out" FT misc_feature 2070805..2072019 FT /note="Match to Ammonium_transp Score 563.23" FT tRNA 2072980..2073074 FT /note="tRNA Ser anticodon GCT, Cove score 74.09" FT intron 2073019..2073029 FT /note="intron tRNA Ser anticodon GCT" FT CDS 2073867..2075384 FT /colour=7 FT /gene="SPCPB1C11.02" FT /label=SPCPB1C11.02 FT /product="putative amino acid permease" FT /fasta_file="fasta/pB1C11.tab.seq.05350.out" FT misc_feature 2073906..2075309 FT /note="Match to aa_permeases Score 513.10" FT tRNA complement(2075891..2075962) FT /note="tRNA Gln anticodon TTG, Cove score 69.22" FT CDS 2077983..2079695 FT /colour=7 FT /gene="SPCPB1C11.03" FT /label=SPCPB1C11.03 FT /note="pB1C11.cand.3 score = 31.74" FT /product="putative membrane transporter" FT /fasta_file="fasta/pB1C11.tab.seq.05351.out" FT misc_feature 2081070..2081160 FT /note="455 (+1) 1 91 SPCC576 S. pombe chromosome 3" FT CDS complement(2082147..2082506) FT /colour=9 FT /gene="SPCC576.19c" FT /note="SPCC576.19c, len:119" FT /product="very hypothetical protein" FT /fasta_file="fasta/c576.tab.seq.04488.out" FT CDS 2083547..2084257 FT /colour=7 FT /gene="SPCC576.02" FT /label=SPCC576.02 FT /note="SPCC576.02, len:236, SIMILARITY:Schizosaccharomyces FT pombe, YAKA_SCHPO, hypothetical 25.4 kD protein c1f7.10 in FT chromosome i., (238 aa), fasta scores: opt: 628, E():0, FT (44.6% identity in 233 aa)" FT /product="putative hydantoin racemase" FT /fasta_file="fasta/c576.tab.seq.04489.out" FT LTR 2084819..2085175 FT /note="Tf1-type LTR" FT CDS complement(2085936..2086514) FT /colour=7 FT /gene="SPCC576.03c" FT /label=SPCC576.03c FT /note="SPCC576.03c, len:192, SIMILARITY:Homo sapiens, FT TDX1_HUMAN, thioredoxin peroxidase 1, (198 aa), fasta FT scores: opt: 895, E():0, (68.1% identity in 191 aa)" FT /product="thioredoxin peroxidase" FT /fasta_file="fasta/c576.tab.seq.04490.out" FT misc_feature complement(2086053..2086502) FT /note="Match to PF00578 AhpC-TSA, AhpC/TSA family Score FT 269.78" FT CDS 2087777..2088577 FT /colour=7 FT /gene="SPCC576.04" FT /label=SPCC576.04 FT /note="SPCC576.04, len:266, SIMILARITY:Emericella nidulans, FT O74710, hypothetical 30.8 kD protein., (270 aa), fasta FT scores: opt: 611, E():2.3e-31, (38.7% identity in 269 aa)" FT /product="putative receptor-associated protein" FT /fasta_file="fasta/c576.tab.seq.04491.out" FT misc_feature 2088026..2088559 FT /note="Match to PF01027 UPF0005, Uncharacterized protein FT family Score 174.16" FT CDS join(2089446..2089952,2090174..2090417,2090519..2091058, FT 2091095..2092878) FT /colour=7 FT /gene="SPCC576.05" FT /label=SPCC576.05 FT /note="SPCC576.05, len:1024, SIMILARITY:Saccharomyces FT cerevisiae, SAC3_YEAST, leucine permease transcriptional FT regulator., (1301 aa), fasta scores: opt: 915, E():0, FT (26.8% identity in 1033 aa)" FT /product="putative leucine permease transcriptional FT regulator; similar to S. cerevisiae SAC3 which has an FT effect on mitosis and actin cytoskeleton" FT /fasta_file="fasta/c576.tab.seq.04492.out" FT misc_feature 2089953..2089958 FT /note="gtttga, splice donor sequence" FT misc_feature 2090158..2090173 FT /note="ttcacacatgacttag, splice branch and acceptor" FT misc_feature 2090418..2090423 FT /note="gtaaac, splice donor sequence" FT misc_feature 2090507..2090518 FT /note="ctaaccttttag, splice branch and acceptor" FT misc_feature 2091059..2091064 FT /note="gtatgt, splice donor sequence" FT misc_feature 2091083..2091094 FT /note="ctaactcataag, splice branch and acceptor" FT CDS complement(join(2093102..2093635,2093686..2094424, FT 2094473..2094537)) FT /colour=7 FT /gene="SPCC576.06c" FT /label=SPCC576.06c FT /note="SPCC576.06c, len:445, SIMILARITY:Saccharomyces FT cerevisiae, SYYM_YEAST, tyrosyl-tRNA synthetase, FT mitochondrial , (492 aa), fasta scores: opt: 873, E():0, FT (35.9% identity in 459 aa)" FT /product="tyrosyl-tRNA synthetase, mitochondrial" FT /fasta_file="fasta/c576.tab.seq.04493.out" FT misc_feature complement(2093636..2093652) FT /note="ctaacaaatccttttag, splice branch and acceptor" FT misc_feature complement(2093680..2093685) FT /note="gtatgt, splice donor sequence" FT misc_feature complement(2093686..2094396) FT /note="Match to PF00579 tRNA-synt_1b, tRNA synthetases FT class I (W and Y) Score 328.78" FT misc_feature complement(2094346..2094378) FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT s ignature" FT misc_feature complement(2094425..2094443) FT /note="ttaactgaactttgttaag, splice branch and acceptor" FT misc_feature complement(2094467..2094472) FT /note="gtaaga, splice donor sequence" FT CDS 2094741..2095313 FT /colour=2 FT /gene="ret3" FT /gene="SPCC576.07" FT /label=ret3 FT /note="SPCC576.07, len:190, SIMILARITY:Saccharomyces FT cerevisiae, COPZ_YEAST, coatomer zeta subunit, (189 aa), FT fasta scores: opt: 519, E():1.8e-27, (44.1% identity in FT 188 aa)" FT /product="putative coatomer zeta subunit" FT /fasta_file="fasta/c576.tab.seq.04494.out" FT CDS complement(2096127..2096888) FT /colour=2 FT /gene="rps2" FT /gene="SPCC576.08c" FT /label=rps2 FT /note="SPCC576.08c, len:253" FT /product="40S ribosomal protein S2" FT /fasta_file="fasta/c576.tab.seq.04495.out" FT misc_feature complement(2096241..2096654) FT /note="Pfam match to entry S5 PF00333, Ribosomal protein FT S5" FT misc_feature complement(2096517..2096615) FT /note="PS00585 Ribosomal protein S5 signature" FT CDS 2097458..2097814 FT /colour=2 FT /gene="rps20" FT /gene="SPCC576.09" FT /label=SPCC576.09 FT /note="SPCC576.09, len:118" FT /product="40S ribosomal protein S20" FT /fasta_file="fasta/c576.tab.seq.04496.out" FT misc_feature 2097512..2097799 FT /note="Pfam match to entry S10 PF00338, Ribosomal protein FT S 10" FT CDS complement(2098579..2099748) FT /colour=2 FT /gene="rpt3" FT /gene="SPCC576.10c" FT /label=rpt3 FT /note="SPCC576.10c, len:389, SIMILARITY:Aspergillus niger., FT PRS6_ASPNG, 26s protease regulatory subunit 6b homolog., FT (423 aa), fasta scores: opt: 1934, E():0, (78.9% identity FT in 384 aa)" FT /product="19S proteasome regulatory subunit" FT /fasta_file="fasta/c576.tab.seq.04497.out" FT misc_feature complement(2098675..2099241) FT /note="Pfam match to entry AAA PF00004, ATPases FT associatedw ith various cellular activities (AAA)" FT misc_feature complement(2098873..2098929) FT /note="PS00674 AAA-protein family signature" FT misc_feature complement(2099203..2099226) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS 2100779..2101384 FT /colour=2 FT /gene="rpl15" FT /gene="SPCC576.11" FT /label=rpl15 FT /note="SPCC576.11, len:201" FT /product="60S ribosomal protein L15" FT /fasta_file="fasta/c576.tab.seq.04498.out" FT misc_feature 2100782..2101327 FT /note="Match to PF00827 Ribosomal_L15e, Ribosomal L15 FT Score 432.08" FT misc_feature 2100914..2100985 FT /note="PS01194 Ribosomal protein L15e signature" FT CDS complement(join(2102332..2102452,2102495..2102643)) FT /colour=8 FT /gene="SPCC576.12c" FT /label=SPCC576.12c FT /note="SPCC576.12c, len:89, SIMILARITY:Mus musculus, FT O08693, d9 splice variant 1., (111 aa), fasta scores: opt: FT 124, E():0.0078, (35.4% identity in 79 aa)" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c576.tab.seq.00039.out" FT misc_feature complement(2102453..2102468) FT /note="ctaattattcgtttag, splice branch and acceptor" FT misc_feature complement(2102489..2102494) FT /note="gtaagg, splice donor sequence" FT CDS 2102653..2103300 FT /colour=10 FT /gene="SPCC576.13" FT /label=SPCC576.13 FT /note="SPCC576.13, len:215, SIMILARITY:Saccharomyces FT cerevisiae, YB81_YEAST, hypothetical 34.3 kD protein in FT fat2-pbp2 intergenic region., (303 aa), fasta scores: opt: FT 233, E():5.8e-06, (24.0% identity in 208 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YBR159W" FT /fasta_file="fasta/c576.tab.seq.04500.out" FT CDS join(2103487..2103746,2104032..2104261,2104305..2104436, FT 2104485..2104714) FT /colour=7 FT /gene="SPCC576.14" FT /label=SPCC576.14 FT /note="SPCC576.14, len:283, SIMILARITY:Saccharomyces FT cerevisiae, DPH5_YEAST, diphthine synthase, (300 aa), FT fasta scores: opt: 1134, E():0, (62.0% identity in 276 aa)" FT /product="putative diphthine synthase" FT /fasta_file="fasta/c576.tab.seq.04501.out" FT misc_feature join(2103493..2103746,2104032..2104261,2104305..2104402) FT /note="Match to PF00590 TP_methylase, Tetrapyrrole FT (Corrin/Porphyrin) Methylases. Score 59.12" FT misc_feature 2103747..2103752 FT /note="gtatgt, splice donor sequence" FT misc_feature 2104020..2104031 FT /note="ctaattgtttag, splice branch and acceptor" FT misc_feature 2104262..2104267 FT /note="gtaagt, splice donor sequence" FT misc_feature 2104292..2104304 FT /note="ctgacaataaaag, splice branch and acceptor" FT misc_feature 2104437..2104442 FT /note="gtacgt, splice donor sequence" FT misc_feature 2104464..2104484 FT /note="ttaattgttaaccacccttag, splice branch and acceptor" FT CDS complement(join(2105271..2106476,2106586..2107158)) FT /colour=2 FT /gene="ksg1" FT /gene="SPCC576.15c" FT /label=ksg1 FT /note="SPCC576.15c, len:592" FT /product="serine/threonine protein kinase; required for FT growth; protein for mating; required for sporulation; null FT lethal" FT /fasta_file="fasta/c576.tab.seq.04502.out" FT misc_feature complement(2105952..2106473) FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain Score 187.03" FT misc_feature complement(2106477..2106492) FT /note="cttacacataatttag, splice branch and acceptor" FT misc_feature complement(2106580..2106585) FT /note="gtatgt, splice donor sequence" FT misc_feature complement(2106586..2106864) FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain Score 56.36" FT LTR complement(2109188..2109531) FT /note="Tf2-type LTR" FT CDS complement(join(2110081..2110295,2110332..2110508, FT 2110545..2110823,2110873..2111121,2111291..2111428)) FT /colour=4 FT /gene="wtf8-pseudo" FT /gene="SPCC576.16" FT /label=wtf8-pseudo FT /note="SPCC576.16," FT /product="wtf8-pseudo" FT /pseudo FT /fasta_file="fasta/c576.tab.seq.04503.out" FT misc_feature complement(2110296..2110308) FT /note="ctaaccatatcag, splice branch and acceptor" FT misc_feature complement(2110358..2110363) FT /note="gtttgt, splice donor sequence" FT misc_feature complement(2110509..2110519) FT /note="ctaacatacag, splice branch and acceptor" FT misc_feature complement(2110539..2110544) FT /note="gtaagt, splice donor sequence" FT misc_feature complement(2110824..2110835) FT /note="ctaactcattag, splice branch and acceptor" FT misc_feature complement(2110867..2110872) FT /note="gtaagt, splice donor sequence" FT misc_feature complement(2111085..2111105) FT /note="aatcctcctaacacacatag, splice branch and acceptor" FT misc_feature complement(2111105..2111110) FT /note="gtaaat, splice donor sequence" FT misc_feature complement(2111122..2111142) FT /note="cattatattaattcaaacag, splice branch and acceptor" FT misc_feature complement(2111276..2111281) FT /note="gtaaat, splice donor sequence" FT misc_feature 2111346..2111349 FT /note="in other WTF genes there are 5 As here, missing A FT ca uses frame-shift -CHECK!!" FT LTR complement(2111754..2112080) FT /note="Tf2-type LTR" FT CDS complement(join(2112538..2114058,2114234..2114290)) FT /colour=7 FT /gene="SPCC576.17c" FT /label=SPCC576.17c FT /note="SPCC576.17c, len:525, FT SIMILARITY:Schizosaccharomyces pombe, CAR1_SCHPO, FT amiloride resistance protein car1., (526 aa), fasta FT scores: opt: 1505, E():0, (43.6% identity in 509 aa)" FT /product="MFS drug efflux transporter of unknown FT specificity" FT /fasta_file="fasta/c576.tab.seq.04504.out" FT misc_feature complement(2113657..2113707) FT /note="PS00216 Sugar transport proteins signature 1" FT misc_feature complement(2114059..2114079) FT /note="taacaaattcttttctttag, splice branch and acceptor" FT misc_feature complement(2114228..2114233) FT /note="gtatgc, splice donor sequence" FT misc_feature complement(2116327..2116371) FT /note="PS00678 Beta-transducin family Trp-Asp repeats FT signa ture" FT misc_feature complement(2116330..2116440) FT /note="Match to PF00400 WD40, WD domain, G-beta repeat FT Score 20.78" FT misc_feature complement(2116447..2116491) FT /note="PS00678 Beta-transducin family Trp-Asp repeats FT signa ture" FT misc_feature complement(2116487..2116635) FT /note="nominal overlap with cosmid SPCC126, EM:AL034490 S. FT pombe chromosome 3" FT misc_feature 2116487..2116635 FT /note="nominal overlap with cosmid SPCC576, EM:AL031798 S. FT pombe chromosome 3" FT misc_feature complement(2116573..2116668) FT /note="Match to WD40 PF00400, Score 26.48" FT misc_feature complement(2116714..2116830) FT /colour=9 FT /note="Pfam match to entry PF00400 G-beta, WD domain, G- FT bet a repeat" FT misc_feature complement(2116846..2116962) FT /note="Match to WD40 PF00400, Score 41.43" FT misc_feature complement(2116972..2117091) FT /note="Match to WD40 PF00400, Score 33.78" FT CDS complement(join(2118187..2118297,2118351..2118560, FT 2118606..2119795,2119870..2119966,2120038..2120220, FT 2120286..2120318)) FT /colour=2 FT /gene="pku70" FT /gene="SPCC126.02c" FT /label=pku70 FT /note="SPCC126.02c, len:607, SIMILARITY:Mus musculus, FT KU70_ MOUSE, ATP-dependent DNA helicaseII, 70kD subunit, FT (595 aa) , fasta scores: opt: 746, E():3.3e-31, (28.7% FT identity in 6 17 aa)" FT /note="SPCC126.02c, len:606, SIMILARITY:Xenopus laevis, FT Q9W626, human ku70 autoantigen homolog, (611 aa), fasta FT scores: opt: 777, E():0, (29.8% identity in 621 aa)" FT /product="involved in DNA double-strand break repair and FT telomere maintenance" FT /fasta_file="fasta/c126.tab.seq.04734.out" FT misc_feature complement(2118298..2118315) FT /colour=6 FT /note="gtaacagttcatatgaag, splice branch and acceptor" FT misc_feature complement(2118345..2118350) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(2118561..2118572) FT /colour=6 FT /note="ttaacattttag, splice branch and acceptor" FT misc_feature complement(2118600..2118605) FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature complement(2119796..2119818) FT /colour=6 FT /note="ctaattttgttcaattgtttaag, splice branch and acceptor" FT misc_feature complement(2119864..2119869) FT /colour=6 FT /note="gtaaaa, splice donor sequence" FT misc_feature complement(2119967..2119981) FT /colour=6 FT /note="ctaaccacagcgcag, splice branch and acceptor" FT misc_feature complement(2120032..2120037) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(2120221..2120237) FT /colour=6 FT /note="ctgacgattgtttaaag, splice branch and acceptor" FT misc_feature complement(2120280..2120285) FT /colour=6 FT /note="gtatga, splice donor sequence" FT LTR complement(2120689..2121037) FT /note="1592 (-1) 1 349 Tf2-type LTR" FT CDS join(2121565..2122641,2122707..2123062,2123102..2123273) FT /colour=2 FT /function="pseudouridine formation in tRNA(Trp) at FT position 27" FT /function="suppressor of a thermosensitive S. cerevisiae FT los1 pus1 double mutant" FT /gene="lps1" FT /gene="SPCC126.03" FT /label=lps1 FT /note="SPCC126.03, len:533" FT /product="pseudouridylate synthase" FT /fasta_file="fasta/c126.tab.seq.04735.out" FT misc_feature join(2121766..2122645,2122738..2122871) FT /note="Match to PseudoU_synth_1 , Score 109.61" FT misc_feature 2122642..2122647 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT intron 2122642..2122706 FT /note="confirmed by mRNA" FT misc_feature 2122695..2122706 FT /colour=6 FT /note="ctaacattctag, splice branch and acceptor" FT misc_feature 2123063..2123068 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT intron 2123063..2123101 FT /note="confirmed by mRNA" FT misc_feature 2123089..2123101 FT /colour=6 FT /note="ctaaccggtttag, splice branch and acceptor" FT CDS complement(join(2123651..2124102,2124174..2124756)) FT /colour=10 FT /gene="SPCC126.04c" FT /label=SPCC126.04c FT /note="SPCC126.04c, len:344, SIMILARITY:Saccharomyces FT cerev isiae, YGL066W, YGG6_YEAST, hypothetical 72.9 kD FT protein, ( 657 aa), fasta scores: opt: 352, E():3.5e-24, FT (28.3% identi ty in 332 aa)" FT /product="hypothetical with similar to G-box-binding FT factor" FT /fasta_file="fasta/c126.tab.seq.04736.out" FT misc_feature complement(2124103..2124118) FT /colour=6 FT /note="ctaacattcaattaag, splice branch and acceptor" FT misc_feature complement(2124168..2124173) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS complement(join(2125445..2125600,2125668..2125766, FT 2125915..2126348,2126443..2126560)) FT /colour=7 FT /gene="SPCC126.05c" FT /label=SPCC126.05c FT /note="SPCC126.05c, len:267, SIMILARITY:Saccharomyces FT cerevisiae, RM30_YEAST, 60S ribosomal protein L30, FT mitochondrial , (281 aa), fasta scores: opt: 184, E():2.8e- FT 05, (29.9% identity in 281 aa)" FT /product="mitochondrial ribosomal protein l30" FT /fasta_file="fasta/c126.tab.seq.04737.out" FT misc_feature complement(2125601..2125618) FT /colour=6 FT /note="ttaaccagttatttctag, splice branch and acceptor" FT misc_feature complement(2125662..2125667) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature complement(2125767..2125780) FT /colour=6 FT /note="ctaacaaactgtag, splice branch and acceptor" FT misc_feature complement(2125909..2125914) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(2126349..2126362) FT /colour=6 FT /note="ctaacatatcttag, splice branch and acceptor" FT misc_feature complement(2126437..2126442) FT /colour=6 FT /note="gtacag, splice donor sequence" FT CDS join(2126850..2126874,2126913..2126990,2127054..2127421, FT 2127530..2127658,2127714..2127849,2127890..2128008, FT 2128051..2128182) FT /colour=7 FT /gene="SPCC126.06" FT /label=SPCC126.06 FT /note="SPCC126.06, len:328, SIMILARITY:Mus musculus, FT O09132 , a6 protein tyrosine kinase homolog, (350 aa), FT fasta score s: opt: 318, E():9.4e-12, (26.8% identity in FT 340 aa)" FT /product="putative twinfilin; actin-binding protein; ADF FT family; cofilin/tropomysin type; putative actin monomer FT sequestering protein; possibly involved in regulation of FT the cortical actin cytoskeleton; possibly prevents actin FT filament assembly; similar to S. cerevisiae TWF1" FT /fasta_file="fasta/c126.tab.seq.04738.out" FT misc_feature 2126875..2126880 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 2126898..2126912 FT /colour=6 FT /note="ctaacgtgtggatag, splice branch and acceptor" FT misc_feature 2126991..2126996 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2127041..2127053 FT /colour=6 FT /note="ctaaatgatttag, splice branch and acceptor" FT misc_feature 2127387..2127761 FT /colour=9 FT /note="Pfam match to entry PF00241 cofilin_ADF, FT Cofilin/tro pomyosin-type actin-binding proteins" FT misc_feature 2127422..2127427 FT /colour=6 FT /note="gtaggt, splice donor sequence" FT misc_feature 2127515..2127529 FT /colour=6 FT /note="ttaacaactatgtag, splice branch and acceptor" FT misc_feature 2127659..2127664 FT /colour=6 FT /note="gtaagg, splice donor sequence" FT misc_feature 2127697..2127713 FT /colour=6 FT /note="ctaacctcctttaaaag, splice branch and acceptor" FT misc_feature 2127850..2127855 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2127876..2127889 FT /colour=6 FT /note="ttaacaaggtctag, splice branch and acceptor" FT misc_feature 2128009..2128014 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 2128039..2128050 FT /colour=6 FT /note="ctcacatgacag, splice branch and acceptor" FT CDS complement(2128634..2130349) FT /colour=7 FT /gene="SPCC126.07c" FT /label=SPCC126.07c FT /note="SPCC126.07c, len:571, SIMILARITY:Saccharomyces FT cerev isiae, YPR093C, Q06834, ring type zinc finger., (310 FT aa), f asta scores: opt: 104, E():1.8e-05, (22.1% identity FT in 272 aa)" FT /product="zinc finger protein; zf-PHD finger" FT /fasta_file="fasta/c126.tab.seq.04739.out" FT misc_feature complement(2129840..2129986) FT /colour=9 FT /note="Pfam match to entry PF00628 PHD, PHD-finger" FT misc_feature complement(2129849..2129980) FT /note="Match to PHD , Score 56.19" FT misc_feature complement(2130116..2130220) FT /note="Match to zf-C3HC4 , Score 24.79" FT CDS complement(2130941..2131879) FT /colour=7 FT /gene="SPCC126.08c" FT /label=SPCC126.08c FT /note="SPCC126.08c, len:311, SIMILARITY:Canis familiaris, FT VP36_CANFA, vesicular integral-membrane protein vip36 , FT (356 aa), fasta scores: opt: 426, E():2e-21, (28.8% FT identity in 326 aa)" FT /product="putative lectin; putative vesicular/golgi FT membrane protein; no apparent S. cerevisiae ortholog; FT predicted N-terminal signal sequence; predicted C- FT terminal transmembrane helix" FT /fasta_file="fasta/c126.tab.seq.04740.out" FT CDS 2133102..2134358 FT /colour=7 FT /gene="SPCC126.09" FT /label=SPCC126.09 FT /note="SPCC126.09, len:417, SIMILARITY:Saccharomyces FT cerevisiae, YKR5_YEAST, hypothetical 55.4 kD protein, (503 FT aa), fasta scores: opt: 273, E():2.2e-10, (27.9% identity FT in 258 aa)" FT /product="putative vacuolar membrane protein; ZIP zinc FT transporter domain; involved in the regulation of zinc FT storage; similar to S. cerevisiae ZRT3" FT /fasta_file="fasta/c126.tab.seq.04741.out" FT CDS 2135602..2136342 FT /colour=2 FT /gene="iah1" FT /gene="SPCC126.10" FT /label=iah1 FT /note="SPCC126.10, len:246" FT /product="isoamyl acetate hydrolytic enzyme homolog" FT /fasta_file="fasta/c126.tab.seq.04742.out" FT CDS complement(join(2137101..2137553,2137604..2137668, FT 2137721..2137754)) FT /colour=10 FT /gene="SPCC126.11c" FT /label=SPCC126.11c FT /note="SPCC126.11c, len:182, FT SIMILARITY:Schizosaccharomyces pombe, PABP_SCHPO, FT polyadenylate-binding protein, (653 aa), fasta scores: FT opt: 135, E():0.11, (29.5% identity in 95 aa)" FT /product="putative RNA-binding protein; no apparent S. FT cerevisiae ortholog" FT /fasta_file="fasta/c126.tab.seq.00046.out" FT misc_feature complement(2137248..2137451) FT /colour=9 FT /note="Pfam match to entry PF00076 rrm, RNA recognition FT mot if. (aka RRM, RBD, or RNP domain)" FT misc_feature complement(2137554..2137569) FT /colour=6 FT /note="ctaacaaattgtgaag, splice branch and acceptor" FT misc_feature complement(2137598..2137603) FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature complement(2137669..2137687) FT /colour=6 FT /note="ctaacatatttttacatag, splice branch and acceptor" FT misc_feature complement(2137715..2137720) FT /colour=6 FT /note="gtaaaa, splice donor sequence" FT CDS join(2139021..2139234,2139288..2139602,2139655..2139825, FT 2139891..2140027) FT /colour=10 FT /gene="SPCC126.12" FT /label=SPCC126.12 FT /note="SPCC126.12, len:277, SIMILARITY:Saccharomyces FT cerevisiae, NIF3_YEAST, ngg1-interacting factor 3., (288 FT aa), fasta scores: opt: 669, E():0, (44.0% identity in 293 FT aa)" FT /product="similar to S. cerevisiae NIF3; DUF34; UPF035 FT (NIF3) family " FT /fasta_file="fasta/c126.tab.seq.04744.out" FT misc_feature join(2139063..2139234,2139288..2139602,2139655..2139825, FT 2139891..2139937) FT /note="Match to DUF34 , Score 63.01" FT misc_feature 2139235..2139240 FT /colour=6 FT /note="gtatgg, splice donor sequence" FT misc_feature 2139277..2139287 FT /colour=6 FT /note="ctcacaactag, splice branch and acceptor" FT misc_feature 2139603..2139608 FT /colour=6 FT /note="gtgagc, splice donor sequence" FT misc_feature 2139645..2139654 FT /colour=6 FT /note="ttgattgtag, splice branch and acceptor" FT misc_feature 2139826..2139831 FT /colour=6 FT /note="gtaagg, splice donor sequence" FT misc_feature 2139876..2139890 FT /colour=6 FT /note="ctaacaacaatgtag, splice branch and acceptor" FT tRNA complement(2140308..2140378) FT /note="tRNA Asp anticodon GTC, Cove score 57.96" FT CDS complement(join(2141470..2141743,2141911..2142074)) FT /colour=7 FT /gene="SPCC126.13c" FT /label=SPCC126.13c FT /note="SPCC126.13c, len:144, SIMILARITY: LOW to FT Caenorhabditis elegans., YQ54_CAEEL, hypothetical 19.0 kD FT protein c16c10.4 in chromosome iii., (166 aa), fasta FT scores: opt: 123, E():0.056, (26.1% identity in 119 aa)" FT /product="similar to sin3 associated polypeptide; possibly FT associated with transcriptional repression; no apparent S. FT cerevisiae ortholog" FT /fasta_file="fasta/c126.tab.seq.04745.out" FT misc_feature complement(2141744..2141760) FT /colour=6 FT /note="ctaacgattaatcttag, splice branch and acceptor" FT misc_feature complement(2141905..2141910) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS join(2142090..2143046,2143092..2143166) FT /colour=2 FT /gene="prp18" FT /gene="SPCC126.14" FT /label=prp18 FT /note="SPCC126.14, len:342, SIMILARITY:Homo sapiens, FT Q99633, hprp18., (342 aa), fasta scores: opt: 359, FT E():3.7e-13, (28.4% identity in 349 aa)" FT /product="putative pre-mRNA splicing factor; similar to S. FT cerevisiae PRP18" FT /fasta_file="fasta/c126.tab.seq.04746.out" FT misc_feature 2143047..2143052 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 2143073..2143091 FT /colour=6 FT /note="ctaacctttcacatgttag, splice branch and acceptor" FT CDS complement(join(2143579..2143955,2144009..2144231)) FT /colour=2 FT /gene="sec65" FT /gene="SPCC126.15c" FT /label=sec65 FT /note="SPCC126.15c, len:199, SIMILARITY:Kluyveromyces FT lactis, SC65_KLULA, signal recognition particle SEC65 FT subunit, ( 181 aa), fasta scores: opt: 275, E():1.8e-14, FT (37.6% identi ty in 149 aa)" FT /product="putative signal recognition particle subunit" FT /fasta_file="fasta/c126.tab.seq.04747.out" FT misc_feature complement(2143956..2143975) FT /colour=6 FT /note="ctaactgactgtgaatgtag, splice branch and acceptor" FT intron complement(2143956..2144008) FT /note="confirmed by mRNA" FT misc_feature complement(2144003..2144008) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature complement(2144010..2144222) FT /note="Match to SRP19 , Score 55.62" FT misc_feature 2144615..2144810 FT /note="nominal overlap with cosmid SPCC1620, EM:AL034491 FT S. pombe chromosome 3" FT misc_feature 2144618..2144810 FT /note="nominal overlap with cosmid SPCC126, EM:AL034490 S. FT pombe chromosome 3" FT CDS complement(join(2145071..2145096,2145155..2145257, FT 2145610..2145711,2145765..2145824)) FT /colour=2 FT /gene="lsm2" FT /gene="SPCC1620.01c" FT /label=lsm2 FT /note="SPCC1620.01c, len:91, SIMILARITY:Saccharomyces FT cerev isiae, YBL026W, SNP3_YEAST, small nuclear FT ribonucleoprotein d homolog snp3, (95 aa), fasta scores: FT opt: 396, E():0, (6 0.0% identity in 95 aa)" FT /product="U6 snRNA-associated protein core protein; FT contains Sm domain; similar to S. cerevisiae LSM2" FT /fasta_file="fasta/c1620.tab.seq.05045.out" FT misc_feature complement(2145097..2145115) FT /colour=6 FT /note="ttaactcactggtttttag, splice branch and acceptor" FT intron complement(2145097..2145154) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(2145149..2145154) FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature complement(2145258..2145272) FT /colour=6 FT /note="ctaataatttattag, splice branch and acceptor" FT intron complement(2145258..2145609) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(2145604..2145609) FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature complement(2145609..2145812) FT /colour=9 FT /note="Pfam match to entry PF01423 Sm, Sm protein, score FT 67.30, E-value 3.3e-16" FT misc_feature complement(2145712..2145726) FT /colour=6 FT /note="ttaaccaaactatag, splice branch and acceptor" FT intron complement(2145712..2145764) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(2145759..2145764) FT /colour=6 FT /note="gtatgc, splice donor sequence" FT LTR 2145996..2146333 FT /note="Tf2-type LTR" FT CDS join(2146661..2146796,2147013..2147342,2147392..2147670, FT 2147707..2147898,2147939..2148001,2148052..2148158) FT /colour=3 FT /gene="wtf10" FT /gene="SPCC1620.02" FT /label=wtf10 FT /note="SPCC1620.02, len:368" FT /product="hypothetical wtf protein" FT /fasta_file="fasta/c1620.tab.seq.05046.out" FT misc_feature 2146797..2146802 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2147001..2147012 FT /colour=6 FT /note="ctaacaatatag, splice branch and acceptor" FT misc_feature 2147343..2147348 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2147380..2147391 FT /colour=6 FT /note="ctaactcattag, splice branch and acceptor" FT misc_feature 2147671..2147676 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT intron 2147671..2147706 FT /note="Intron confirmed by EST" FT misc_feature 2147696..2147706 FT /colour=6 FT /note="ctgacaaacag, splice branch and acceptor" FT misc_feature 2147899..2147904 FT /colour=6 FT /note="gttcgt, splice donor sequence" FT intron 2147899..2147938 FT /note="Intron confirmed by EST" FT misc_feature 2147926..2147938 FT /colour=6 FT /note="ctaaccatgccag, splice branch and acceptor" FT misc_feature 2148002..2148007 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 2148039..2148051 FT /colour=6 FT /note="cttacccgactag, splice branch and acceptor" FT LTR 2148734..2149079 FT /note="Tf1-type LTR" FT LTR complement(2149054..2149402) FT /note="Tf2-type LTR" FT CDS 2149628..2150188 FT /colour=8 FT /gene="SPCC1620.03" FT /label=SPCC1620.03 FT /note="SPCC1620.03, len:186" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1620.tab.seq.05047.out" FT repeat_region 2150209..2150242 FT /label={at}17 FT /note="(at)17" FT CDS complement(2150279..2151808) FT /colour=7 FT /gene="SPCC1620.04c" FT /label=SPCC1620.04c FT /note="SPCC1620.04c, len:509, FT SIMILARITY:Schizosaccharomyce s pombe, YA98_SCHPO, FT hypothetical 60.5 kD protein c13g6.08 in chromosome I, FT (535 aa), fasta scores: opt: 1109, E():0, (39.6% identity FT in 487 aa)" FT /product="WD repeat protein" FT /fasta_file="fasta/c1620.tab.seq.05048.out" FT misc_feature complement(2150858..2150974) FT /colour=9 FT /note="Pfam match to entry PF00400 WD40, WD domain, G-beta FT repeat, score 25.50, E-value 0.0012" FT misc_feature complement(2150993..2151106) FT /colour=9 FT /note="Pfam match to entry PF00400 WD40, WD domain, G-beta FT repeat, score 8.10, E-value 4.7" FT misc_feature complement(2151122..2151238) FT /colour=9 FT /note="Pfam match to entry PF00400 WD40, WD domain, G-beta FT repeat, score 2.10, E-value 29" FT CDS join(2153089..2153091,2153134..2153244,2153291..2153418, FT 2153461..2153648,2153769..2153990,2154064..2154267, FT 2154359..2154537) FT /colour=7 FT /gene="SPCC1620.05" FT /label=SPCC1620.05 FT /note="SPCC1620.05, len:344, SIMILARITY:Rattus norvegicus, FT PGTA_RAT, rab geranylgeranyltransferase alpha subunit, FT (567 aa), fasta scores: opt: 593, E():0, (37.8% identity FT in 251 aa)" FT /product="putative rab geranylgeranyltransferase alpha sub FT unit" FT /fasta_file="fasta/c1620.tab.seq.05049.out" FT misc_feature 2153092..2153097 FT /colour=6 FT /note="gtgagc, splice donor sequence" FT misc_feature 2153117..2153133 FT /colour=6 FT /note="ctaacaagtgtgcgtag, splice branch and acceptor" FT misc_feature 2153245..2153250 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 2153281..2153290 FT /colour=6 FT /note="ttaactttttaag, splice branch and acceptor" FT misc_feature join(2153291..2153418,2153461..2153648,2153769..2153990, FT 2154085..2154267,2154359..2154531) FT /note="Match to PF01239 PPTA, protein prenyltransferase FT alpha subunit Score 102.67" FT misc_feature 2153419..2153424 FT /colour=6 FT /note="gtgagt, splice donor sequence" FT misc_feature 2153450..2153460 FT /colour=6 FT /note="ttaacaaagaaag, splice branch and acceptor" FT misc_feature 2153649..2153654 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2153756..2153768 FT /colour=6 FT /note="ctaactagcctag, splice branch and acceptor" FT misc_feature 2153991..2153996 FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature 2154048..2154063 FT /colour=6 FT /note="ttaactcaacctgtag, splice branch and acceptor" FT misc_feature 2154268..2154273 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2154344..2154358 FT /colour=6 FT /note="ctaatattgtaccag, splice branch and acceptor" FT CDS complement(join(2154785..2155312,2155381..2155747, FT 2155900..2155970)) FT /colour=7 FT /gene="SPCC1620.06c" FT /label=SPCC1620.06c FT /note="SPCC1620.06c, len:321, SIMILARITY:Homo sapiens, FT KPR1 _HUMAN, ribose-phosphate pyrophosphokinase i, (317 FT aa), fas ta scores: opt: 1453, E():0, (70.6% identity in FT 316 aa)" FT /product="ribose-phosphate pyrophosphokinase" FT /fasta_file="fasta/c1620.tab.seq.05050.out" FT misc_feature complement(2154923..2155312) FT /note="Match to PF00156 Pribosyltran, Phosphoribosyl FT transferase domain Score 117.86" FT misc_feature complement(2155313..2155328) FT /colour=6 FT /note="ctaacatactatttag, splice branch and acceptor" FT misc_feature complement(2155375..2155380) FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature complement(2155384..2155431) FT /colour=8 FT /note="PS00114 Phosphoribosyl pyrophosphate synthetase FT signature" FT misc_feature complement(2155748..2155765) FT /colour=6 FT /note="ctaaaaatttgtaaatag, splice branch and acceptor" FT misc_feature complement(2155894..2155899) FT /colour=6 FT /note="gtatga, splice donor sequence" FT CDS complement(join(2157204..2157945,2158030..2158271, FT 2158330..2158350)) FT /colour=8 FT /gene="SPCC1620.07c" FT /label=SPCC1620.07c FT /note="SPCC1620.07c, len:334" FT /product="hypothetical protein; sequence orphan; contains FT predicted N-terminal signal sequence; contains 2 predicted FT transmembrane helices" FT /fasta_file="fasta/c1620.tab.seq.05051.out" FT misc_feature complement(2157946..2157964) FT /colour=6 FT /note="ctaatttttgtttgtttag, splice branch and acceptor" FT misc_feature complement(2158024..2158029) FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature complement(2158272..2158286) FT /colour=6 FT /note="ctaacatgtgattag, splice branch and acceptor" FT misc_feature complement(2158324..2158329) FT /colour=6 FT /note="gtttgt, splice donor sequence" FT LTR complement(2159647..2159989) FT /note="Tf1-type LTR" FT CDS 2160499..2161800 FT /colour=7 FT /gene="SPCC1620.08" FT /label=SPCC1620.08 FT /note="SPCC1620.08, len:509, SIMILARITY:Mus musculus, FT G3766 201, atp-specific succinyl-coa synthetase beta FT subunit, (42 6 aa), fasta scores: opt: 1541, E():0, (55.9% FT identity in 4 15 aa)" FT /product="Putative atp-specific succinyl-coa synthetase FT beta subunit" FT /fasta_file="fasta/c1620.tab.seq.05052.out" FT misc_feature 2161321..2161728 FT /colour=9 FT /note="Pfam match to entry PF00549 ligase-CoA, CoA-ligases" FT CDS complement(join(2162427..2163263,2163305..2163400, FT 2163484..2164023)) FT /colour=7 FT /gene="SPCC1620.09c" FT /label=SPCC1620.09c FT /note="SPCC1620.09c, len:490, SIMILARITY:Saccharomyces FT cere visiae, YGR186W, T2FA_YEAST, transcription initiation FT facto r iif, alpha subunit, (735 aa), fasta scores: opt: FT 709, E() :2.2e-25, (36.8% identity in 345 aa)" FT /product="putative transcription initiation factor TFIIF, FT alpha subunit" FT /fasta_file="fasta/c1620.tab.seq.05053.out" FT misc_feature complement(2163264..2163276) FT /colour=6 FT /note="ctaacccatttag, splice branch and acceptor" FT misc_feature complement(2163299..2163304) FT /colour=6 FT /note="gtcagt, splice donor sequence" FT misc_feature complement(2163401..2163412) FT /colour=6 FT /note="cttactctatag, splice branch and acceptor" FT misc_feature complement(2163478..2163483) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS 2164105..2165022 FT /colour=10 FT /gene="SPCC1620.10" FT /label=SPCC1620.10 FT /note="SPCC1620.10, len:305, SIMILARITY:Caenorhabditis FT eleg ans., YNE1_CAEEL, hypothetical 52.8 kD protein FT r08d7.1 in c hromosome iii, (458 aa), fasta scores: opt: FT 291, E():1.3e-1 3, (29.6% identity in 230 aa)" FT /product="conserved protein" FT /fasta_file="fasta/c1620.tab.seq.05054.out" FT CDS join(2165932..2166125,2166175..2168536) FT /colour=7 FT /gene="SPCC1620.11" FT /label=SPCC1620.11 FT /note="SPCC1620.11, len:851, FT SIMILARITY:Schizosaccharomyces pombe, O14310, nucleoporin., FT (933 aa), fasta scores: opt: 857, E():0, (29.2% identity FT in 927 aa)" FT /product="putative nucleoporin complex subunit" FT /fasta_file="fasta/c1620.tab.seq.05055.out" FT misc_feature 2166126..2166131 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2166159..2166174 FT /colour=6 FT /note="ctaatgaacgatatag, splice branch and acceptor" FT CDS complement(2168699..2170486) FT /colour=7 FT /gene="SPCC1620.12c" FT /label=SPCC1620.12c FT /note="SPCC1620.12c, len:595, SIMILARITY:Saccharomyces FT cere visiae, YPL249c, Q12344, similar to mouse Tbc1 FT protein, (894 aa), fasta scores: opt: 214, E():9.6e-08, FT (20.1% ident ity in 627 aa)" FT /product="TBC domain protein; putative GTPase activating FT protein of Rab-like GTPase" FT /fasta_file="fasta/c1620.tab.seq.05056.out" FT misc_feature complement(2169332..2170009) FT /colour=9 FT /note="Pfam match to entry PF00566 TBC, TBC domain, score - FT 41.40, E-value 0.00025" FT CDS 2172368..2173216 FT /colour=7 FT /gene="SPCC1620.13" FT /label=SPCC1620.13 FT /note="SPCC1620.13, len:282, SIMILARITY:Aquifex aeolicus., FT O67630, phosphoglycerate mutase, (220 aa), fasta scores: FT op t: 203, E():4.3e-09, (29.1% identity in 182 aa)" FT /product="putative phosphoglycerate mutase family member" FT /fasta_file="fasta/c1620.tab.seq.05057.out" FT misc_feature 2172536..2172796 FT /colour=9 FT /note="Pfam match to entry PF00300 PGAM, Phosphoglycerate FT m utase family" FT misc_feature complement(2173769..2173936) FT /colour=9 FT /note="Pfam match to entry PF00439 bromodomain, FT Bromodomain" FT misc_feature complement(2174447..2174485) FT /colour=8 FT /note="PS00018 EF-hand calcium-binding domain" FT misc_feature complement(2174663..2174815) FT /colour=9 FT /note="Pfam match to entry PF00271 helicase_C, Helicases FT co nserved C-terminal domain" FT misc_feature 2174717..2174815 FT /note="nominal overlap with cosmid SPCC830, EM:AL109850 S. FT pombe chromosome 3" FT misc_feature 2174717..2174815 FT /note="nominal overlap with cosmid SPCC1620, EM:AL034491 FT S. pombe chromosome 3" FT misc_feature complement(2175071..2175952) FT /colour=9 FT /note="Pfam match to entry PF00176 SNF2_N, SNF2 and others FT N-terminal domain," FT misc_RNA 2179424..2179846 FT /colour=3 FT /note="mRNA from spc07037; not associated with an ORF" FT LTR 2181375..2181732 FT /note="TF1 LTR" FT CDS join(2182104..2182242,2182410..2182658,2182708..2182931, FT 2182977..2183404) FT /colour=4 FT /gene="wtf10-pseudo" FT /gene="SPCC830.02" FT /label=wtf10-pseudo FT /note="SPCC830.02, len:346" FT /product="wtf-pseudo" FT /pseudo FT /fasta_file="fasta/c830.tab.seq.05278.out" FT misc_feature 2182243..2182248 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 2182659..2182664 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2182696..2182707 FT /colour=6 FT /note="ctaactcattag, splice branch and acceptor" FT misc_feature 2182932..2182937 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 2182966..2182976 FT /colour=6 FT /note="ctaacacgcag, splice branch and acceptor" FT CDS join(2184707..2184740,2184818..2186994) FT /colour=10 FT /gene="SPCC830.03" FT /label=SPCC830.03 FT /note="SPCC830.03, len:736, SIMILARITY:some to, FT Saccharomyces cerevisiae, Q07845, chromosome xii reading FT frame orf yll035w., (632 aa), fasta scores: opt: 345, FT E():1.1e-14, (23.0% identity in 686 aa)" FT /product="eukaryotic conserved protein; similar to S. FT cerevisiae YLL035W null lethal and predicted to interact FT with LAS1 involved in cell morphogenesis; GFP fusion FT nuclear; contains PS00017 ATP/GTP-binding site motif A (P- FT loop)" FT /fasta_file="fasta/c830.tab.seq.05279.out" FT misc_feature 2184741..2184746 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2184800..2184817 FT /colour=6 FT /note="ctaacagttctatgacag, splice branch and acceptor" FT misc_feature 2185795..2185818 FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT CDS complement(2187623..2188054) FT /colour=8 FT /gene="SPCC830.04c" FT /label=SPCC830.04c FT /note="SPCC830.04c, len:143" FT /product="hypothetical protein; sequence orphan; has FT transcript profile on microarray" FT /fasta_file="fasta/c830.tab.seq.05280.out" FT CDS complement(join(2189435..2190940,2191462..2191629)) FT /colour=7 FT /gene="SPCC830.05c" FT /label=SPCC830.05c FT /note="SPCC830.05c, len:557, SIMILARITY:Saccharomyces FT cerevisiae, YFC4_YEAST, hypothetical 96.7 kD protein in FT ste2-frs2 intergenic region., (832 aa), fasta scores: opt: FT 417, E():1.6e-15, (31.3% identity in 528 aa)" FT /product="putative Member of NuA4 histone FT acetyltransferase complex; similar to S. cerevisiae EPL1" FT /fasta_file="fasta/c830.tab.seq.05281.out" FT misc_feature complement(2190941..2190954) FT /colour=6 FT /note="ctaacaatttatag, splice branch and acceptor" FT misc_feature complement(2191456..2191461) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS join(2193104..2193155,2193349..2193585,2193648..2193760, FT 2193814..2193936) FT /colour=7 FT /gene="SPCC830.06" FT /label=SPCC830.06 FT /note="SPCC830.06, len:173, SIMILARITY:Neurospora crassa, FT CALB_NEUCR, calcineurin b subunit, (174 aa), fasta scores: FT opt: 718, E():0, (66.7% identity in 150 aa)" FT /product="putative calcineurin b subunit; protein FT phosphatase regulatory subunit with EF hand domain" FT /fasta_file="fasta/c830.tab.seq.05282.out" FT misc_feature 2193156..2193161 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2193329..2193348 FT /colour=6 FT /note="ctaacgttcattgtatctag, splice branch and acceptor" FT misc_feature 2193369..2193455 FT /note="Match to PF00036 efhand" FT misc_feature 2193474..2193536 FT /note="Match to PF00036 efhand, EF hand Score 21.03" FT misc_feature 2193586..2193591 FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature 2193626..2193647 FT /colour=6 FT /note="ctaacattattgttttatctag, splice branch and acceptor" FT misc_feature 2193650..2193724 FT /note="Match to PF00036 efhand, EF hand Score 28.05" FT misc_feature 2193761..2193766 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 2193794..2193813 FT /colour=6 FT /note="ctgactcctattataactag, splice branch and acceptor" FT misc_feature 2193817..2193897 FT /note="Match to PF00036 efhand, EF hand Score 39.27" FT CDS complement(2194853..2195992) FT /colour=2 FT /gene="psi" FT /gene="SPCC830.07c" FT /label=psi FT /note="SPCC830.07c, len:379" FT /product="DNAJ domain protein; required for nuclear FT migration during mitosis; required for the normal FT initiation of translation" FT /fasta_file="fasta/c830.tab.seq.05283.out" FT misc_feature complement(2195789..2195977) FT /colour=9 FT /note="Pfam match to entry PF00226 DnaJ, DnaJ domain," FT CDS complement(join(2197208..2197422,2197546..2197828, FT 2197962..2198012)) FT /colour=10 FT /gene="SPCC830.08c" FT /label=SPCC830.08c FT /note="SPCC830.08c, len:182, SIMILARITY:Saccharomyces FT cerevisiae, Q12402, hypothetical 20.3 kD protein ypr027w., FT (180 aa), fasta scores: opt: 254, E():1.7e-10, (31.7% FT identity in 189 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YIP2; possibly involved in membrane trafficking by FT similarity" FT /fasta_file="fasta/c830.tab.seq.05284.out" FT misc_feature complement(2197423..2197446) FT /colour=6 FT /note="ctaactggggattttcctttttag, splice branch and FT acceptor" FT misc_feature complement(2197540..2197545) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(2197829..2197845) FT /colour=6 FT /note="ctaacttttttttccag, splice branch and acceptor" FT misc_feature complement(2197956..2197961) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS complement(2200174..2200593) FT /colour=7 FT /gene="SPCC830.09c" FT /label=SPCC830.09c FT /note="SPCC830.09c, len:139, SIMILARITY:Saccharomyces FT cerevisiae, YAD3_YEAST, hypothetical 19.6 kD protein in FT pyk1-snc1 intergenic region., (173 aa), fasta scores: opt: FT 211, E():1.6e-08, (39.7% identity in 141 aa)" FT /product="putative RNase P and RNase MRP subunit; putative FT pre-tRNA/pre-rRNA processing protein; similar to S. FT cerevisiae POP5" FT /fasta_file="fasta/c830.tab.seq.05285.out" FT CDS join(2202418..2202424,2202529..2202630,2202688..2202752, FT 2202889..2202962,2203009..2203040,2203082..2203251, FT 2203297..2203413) FT /colour=7 FT /gene="SPCC830.10" FT /label=SPCC830.10 FT /note="SPCC830.10, len:188, SIMILARITY:Homo sapiens, FT O14878, putative oncogene protein, (157 aa), fasta scores: FT opt: 540, E():4e-29, (47.7% identity in 151 aa)" FT /product="similar to S. cerevisiae HAM1; protein FT controlling 6-N-hydroxylaminopurine sensitivity and FT mutagenesis" FT /fasta_file="fasta/c830.tab.seq.05286.out" FT misc_feature 2202425..2202430 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2202506..2202528 FT /colour=6 FT /note="ctaacaagattgctgtcccatag, splice branch and acceptor" FT misc_feature 2202631..2202636 FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature 2202669..2202687 FT /colour=6 FT /note="ctaacatgatgttttaaag, splice branch and acceptor" FT misc_feature 2202753..2202758 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2202876..2202888 FT /colour=6 FT /note="ctaacgctaatag, splice branch and acceptor" FT misc_feature 2202963..2202968 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 2202996..2203008 FT /colour=6 FT /note="ttaacaaaagtag, splice branch and acceptor" FT misc_feature 2203041..2203046 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 2203068..2203081 FT /colour=6 FT /note="ctaactagtataag, splice branch and acceptor" FT misc_feature 2203252..2203257 FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature 2203283..2203296 FT /colour=6 FT /note="ttaatattccttag, splice branch and acceptor" FT CDS complement(join(2204084..2204558,2204654..2204706)) FT /colour=10 FT /gene="SPCC830.11c" FT /label=SPCC830.11c FT /note="SPCC830.11c, len:175, SIMILARITY:Homo sapiens, FT AAD34132, cgi-137 protein., (172 aa), fasta scores: opt: FT 520, E():1.7e-26, (44.0% identity in 168 aa)" FT /product="conserved protein; possibly involved in FT oxidative stress response; similar to S. cerevisiae FAP7" FT /fasta_file="fasta/c830.tab.seq.05287.out" FT misc_feature complement(2204559..2204574) FT /colour=6 FT /note="ctaactttttccctag, splice branch and acceptor" FT misc_feature complement(2204648..2204653) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 2205315..2205647 FT /colour=9 FT /note="Pfam match to entry PF00069 pkinase, Eukaryotic FT protein kinase domain," FT misc_feature 2205396..2205401 FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature 2205769..2205774 FT /colour=6 FT /note="gtatgt, splice branch and donor sequence" FT misc_feature 2205831..2205930 FT /note="nominal overlap with cosmid SPCC1919, EM:AL035075 FT S. pombe chromosome 3" FT misc_feature 2205831..2205930 FT /note="nominal overlap with cosmid SPCC830, EM:AL109850 S. FT pombe chromosome 3" FT misc_feature 2205852..2205865 FT /colour=6 FT /note="ctaacaacaattag, splice branch and acceptor" FT misc_feature join(2205862..2205985,2206038..2206195,2206236..2206376) FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain Score 94.64" FT misc_feature 2205986..2205991 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2206018..2206037 FT /colour=6 FT /note="ttaatcttgttcccatatag, splice branch and acceptor" FT misc_feature 2206196..2206201 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2206223..2206235 FT /colour=6 FT /note="ttaacctctttag, splice branch and acceptor" FT misc_feature 2206385..2206390 FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature 2206399..2206563 FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain Score 46.31" FT misc_feature 2206427..2206448 FT /colour=6 FT /note="ctaatatatataacaattatag, splice branch and acceptor" FT CDS join(2207273..2207397,2207441..2207504,2207561..2208370) FT /colour=7 FT /gene="SPCC1919.02" FT /label=SPCC1919.02 FT /note="SPCC1919.02, len:332" FT /product="putative protease B; putative integral membrane FT protein of the endoplasmic reticulum; possibly required FT for post-translational processing of protease; similar to FT S. cerevisiae PBN1" FT /fasta_file="fasta/c1919.tab.seq.04526.out" FT misc_feature 2207398..2207403 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2207425..2207440 FT /colour=6 FT /note="ctaataccatttcaag, splice branch and acceptor" FT misc_feature 2207505..2207510 FT /colour=6 FT /note="gtaata, splice donor sequence" FT misc_feature 2207547..2207560 FT /colour=6 FT /note="ctaatttgtactag, splice branch and acceptor" FT CDS complement(join(2208636..2208674,2208723..2209191, FT 2209288..2209390,2209561..2209821,2209875..2209899)) FT /colour=7 FT /gene="SPCC1919.03c" FT /label=SPCC1919.03c FT /note="SPCC1919.03c, len:298, SIMILARITY:Rattus norvegicus, FT AAF01293, amp-activated protein kinase beta-2 regulatory FT subunit., (271 aa), fasta scores: opt: 458, E():7.6e-22, FT (38.9% identity in 198 aa)" FT /product="putative 5'-amp-activated protein kinase; FT possible regulation of fatty acid synthesis by the FT phosphorylation of acetyl-Coa carboxylase; possibly FT regulates carbohydrate metabolism; similar to S. FT cerevisiae SIP2; subcellular localization of GFP fusion- FT Membrane and cytoplasm" FT /fasta_file="fasta/c1919.tab.seq.04527.out" FT misc_feature complement(2208675..2208692) FT /colour=6 FT /note="ctaactttgtttccccag, splice branch and acceptor" FT intron complement(2208675..2208722) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(2208717..2208722) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(2209192..2209211) FT /colour=6 FT /note="ctaactttttcgccaaatag, splice branch and acceptor" FT intron complement(2209192..2209287) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(2209282..2209287) FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature complement(2209391..2209410) FT /colour=6 FT /note="ttaattacttacacatatag, splice branch and acceptor" FT intron complement(2209391..2209560) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(2209555..2209560) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(2209822..2209836) FT /colour=6 FT /note="ctaatttaatgttag, splice branch and acceptor" FT intron complement(2209822..2209874) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(2209869..2209874) FT /colour=6 FT /note="gtaatg, splice donor sequence" FT LTR complement(2211158..2211488) FT /colour=4 FT /note="partially degraded lone tf2-typre LTR" FT LTR complement(2211540..2211888) FT /colour=4 FT /note="Lone tf2-type LTR" FT CDS 2212003..2212773 FT /colour=8 FT /gene="SPCC1919.04" FT /label=SPCC1919.04 FT /note="SPCC1919.04, len:256" FT /product="hypothetical protein; sequence orphan; contains FT 3 predicted transmembrane helices; predicted N-terminal FT signal sequence" FT /fasta_file="fasta/c1919.tab.seq.04528.out" FT CDS 2213660..2217829 FT /colour=7 FT /gene="SPCC1919.05" FT /label=SPCC1919.05 FT /note="SPCC1919.05, len:1389, SIMILARITY:Saccharomyces FT cerevisiae, Q06585, hypothetical 163.7 kD protein., (1432 FT aa), fasta scores: opt: 1238, E():0, (25.7% identity in FT 1453 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT SKI3 part of a system to protect cells from double- FT stranded RNA (dsRNA) viruses; possibly exosome FT interaction?- check; contains 1 predicted transmembrane FT region; contains TPR domain" FT /fasta_file="fasta/c1919.tab.seq.04529.out" FT misc_feature 2213774..2213860 FT /colour=9 FT /note="Pfam match to entry PF00515 TPR, TPR Domain" FT misc_feature 2215391..2215477 FT /colour=9 FT /note="Pfam match to entry PF00515 TPR, TPR Domain" FT misc_feature 2215616..2215702 FT /colour=9 FT /note="Pfam match to entry PF00515 TPR, TPR Domain" FT misc_feature 2215718..2215804 FT /colour=9 FT /note="Pfam match to entry PF00515 TPR, TPR Domain" FT CDS complement(join(2220027..2220103,2220164..2220217, FT 2220258..2220491,2220541..2220786,2220953..2221091)) FT /colour=4 FT /gene="wtf9-pseudo" FT /gene="SPCC1919.06c" FT /label=wtf9-pseudo FT /note="SPCC1919.06c, len:249" FT /product="wtf-pseudo" FT /pseudo FT /fasta_file="fasta/c1919.tab.seq.04530.out" FT misc_feature complement(2220030..2221091) FT /colour=3 FT /note="putative pseudogene as one intron uses illegal GAG FT acceptor" FT misc_feature complement(2220104..2220117) FT /colour=6 FT /note="ctaatcatcattag, splice branch and acceptor" FT misc_feature complement(2220158..2220163) FT /colour=6 FT /note="gtaaat, splice donor sequence" FT misc_feature complement(2220218..2220229) FT /colour=6 FT /note="ctgacaacatag, splice branch and acceptor" FT misc_feature complement(2220252..2220257) FT /colour=6 FT /note="gtttgt, splice donor sequence" FT misc_feature complement(2220492..2220503) FT /colour=6 FT /note="ctaactcatgag, splice branch and non-consensus FT accept or" FT misc_feature complement(2220535..2220540) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(2220787..2220799) FT /colour=6 FT /note="ttaatttaaacag, splice branch and acceptor" FT misc_feature complement(2220947..2220952) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT LTR complement(2221330..2221654) FT /colour=4 FT /note="lone partially degraded tf2-type LTR" FT CDS 2222483..2223103 FT /colour=8 FT /gene="SPCC1919.07" FT /label=SPCC1919.07 FT /note="SPCC1919.07, len:206" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1919.tab.seq.04531.out" FT CDS complement(join(2223123..2223366,2223422..2223471)) FT /colour=7 FT /gene="SPCC1919.08c" FT /label=SPCC1919.08c FT /note="SPCC1919.08c, len:97, SIMILARITY:Saccharomyces FT cerevisiae, RM33_YEAST, mitochondrial 60s ribosomal FT protein l33, (85 aa), fasta scores: opt: 203, E():3e-09, FT (43.2% identity in 81 aa)" FT /product="mitochondrial ribosomal protein L30" FT /fasta_file="fasta/c1919.tab.seq.04532.out" FT misc_feature complement(2223367..2223382) FT /colour=6 FT /note="ctaaccaatattttag, splice branch and acceptor" FT intron complement(2223367..2223421) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(2223416..2223421) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT LTR complement(2223580..2223922) FT /colour=4 FT /note="partially degraded tf1-type LTR" FT CDS join(2224054..2224088,2224143..2224214,2224530..2225157) FT /colour=2 FT /gene="tif6" FT /gene="SPCC1919.09" FT /label=tif6 FT /note="SPCC1919.09, len:244, SIMILARITY:Saccharomyces FT cerev isiae, YPR015C, IF6_YEAST, eukaryotic translation FT initiatio n factor 6, (245 aa), fasta scores: opt: 1267, FT E():0, (77.1 % identity in 245 aa)" FT /note="SPCC1919.09, len:244" FT /product="eukaryotic translation initiation factor 6" FT /fasta_file="fasta/c1919.tab.seq.04533.out" FT misc_feature 2224089..2224094 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2224129..2224142 FT /colour=6 FT /note="ttaacaaattatag, splice branch and acceptor" FT misc_feature join(2224132..2224214,2224530..2225034) FT /note="Match to PF00069 eIF6, Eukaryotic protein kinase FT domain Score 389.09" FT misc_feature 2224215..2224220 FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature 2224514..2224529 FT /colour=6 FT /note="ctaacttttataacag, splice branch and acceptor" FT CDS complement(join(2225948..2230360,2230435..2230543, FT 2230603..2230631)) FT /colour=2 FT /gene="myo52" FT /gene="SPCC1919.10c" FT /label=myo52 FT /note="SPCC1919.10c, len:1516, SIMILARITY:Saccharomyces FT cerevisiae, MYS4_YEAST, myosin-4 isoform., (1471 aa), FT fasta scores: opt: 2688, E():0, (38.6% identity in 1460 FT aa)" FT /product="class V myosin; cell polarity protein; involved FT in cytokinesis; IQ domains; DIL domain" FT /fasta_file="fasta/c1919.tab.seq.04534.out" FT misc_feature complement(2226260..2226565) FT /note="Match to PF00069 DIL, Eukaryotic protein kinase FT domain Score 39.31" FT misc_feature complement(2227905..2227973) FT /colour=9 FT /note="Pfam match to entry PF00612 IQ, Short calmodulin- FT bin ding motif containing conserved Ile and Gln residues" FT misc_feature complement(2227974..2228042) FT /colour=9 FT /note="Pfam match to entry PF00612 IQ, Short calmodulin- FT bin ding motif containing conserved Ile and Gln residues" FT misc_feature complement(2228049..2228117) FT /colour=9 FT /note="Pfam match to entry PF00612 IQ, Short calmodulin- FT bin ding motif containing conserved Ile and Gln residues" FT misc_feature complement(2228118..2228186) FT /colour=9 FT /note="Pfam match to entry PF00612 IQ, Short calmodulin- FT bin ding motif containing conserved Ile and Gln residues" FT misc_feature complement(2228237..2230273) FT /note="Match to PF00063 myosin_head, Myosin head (motor FT domain) Score 1147.38" FT misc_feature complement(2228370..2230409) FT /colour=9 FT /note="Pfam match to entry PF00063 myosin_head, Myosin FT head (motor domain)" FT misc_feature complement(2230361..2230378) FT /colour=6 FT /note="ctaatgtgatcttgttag, splice branch and acceptor" FT misc_feature complement(2230429..2230434) FT /colour=6 FT /note="gtacga, splice donor sequence" FT misc_feature complement(2230544..2230568) FT /colour=6 FT /note="ctaatgttgttgttgcgaaatgtag, splice branch and FT accepto r" FT misc_feature complement(2230597..2230602) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT LTR complement(2231267..2231588) FT /colour=4 FT /note="tf2-type lone LTR" FT CDS join(2232661..2232686,2232753..2232762,2232870..2232945, FT 2232989..2233036,2233094..2233198,2233237..2233795, FT 2233843..2234281) FT /colour=10 FT /gene="SPCC1919.11" FT /label=SPCC1919.11 FT /note="SPCC1919.11, len:420, FT SIMILARITY:Schizosaccharomyces pombe, CAB52037, FT hypothetical sh3-containing protein., (501 aa), fasta FT scores: opt: 354, E():2.2e-14, (26.0% identity in 323 aa)" FT /product="SH3 Src homology domain protein; no apparent S. FT cerevisiae ortholog" FT /fasta_file="fasta/c1919.tab.seq.04535.out" FT misc_feature 2232687..2232692 FT /colour=6 FT /note="gtaagg, splice donor sequence" FT misc_feature 2232735..2232752 FT /colour=6 FT /note="ttgaccccttttttttag, splice branch and acceptor" FT misc_feature 2232763..2232768 FT /colour=6 FT /note="gtgagt, splice donor sequence" FT misc_feature 2232857..2232869 FT /colour=6 FT /note="ctgaccttattag, splice branch and acceptor" FT misc_feature 2232946..2232951 FT /colour=6 FT /note="gtgagt, splice donor sequence" FT misc_feature 2232975..2232988 FT /colour=6 FT /note="ttaacataatgtag, splice branch and acceptor" FT misc_feature 2233037..2233042 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2233078..2233093 FT /colour=6 FT /note="ttaacaaaataattag, splice branch and acceptor" FT misc_feature 2233199..2233204 FT /colour=6 FT /note="gtaggt, splice donor sequence" FT misc_feature 2233226..2233236 FT /colour=6 FT /note="ttaactcatag, splice branch and acceptor" FT misc_feature 2233796..2233801 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2233832..2233842 FT /colour=6 FT /note="ctgaccaatag, splice branch and acceptor" FT misc_feature 2233865..2234035 FT /note="Match to PF00018 SH3, Src homology domain 3 Score FT 51.07" FT CDS complement(2234348..2236879) FT /colour=10 FT /gene="SPCC1919.12c" FT /label=SPCC1919.12c FT /note="SPCC1919.12c, len:843, SIMILARITY:Saccharomyces FT cerevisiae, YBS4_YEAST, hypothetical 47.8 kD protein in FT hsp26-tif32 intergenic region., (413 aa), fasta scores: FT opt: 703, E():0, (40.2% identity in 363 aa)" FT /product="conserved protein; similar to S. cerevisiae FT YBR074W; contains 9 predicted transmembrane helices" FT /fasta_file="fasta/c1919.tab.seq.04536.out" FT CDS complement(join(2237052..2237413,2237537..2238023)) FT /colour=10 FT /gene="SPCC1919.13c" FT /label=SPCC1919.13c FT /note="SPCC1919.13c, len:282, SIMILARITY:Arabidopsis FT thaliana, Q9ZWE5, f20n2.6., (437 aa), fasta scores: opt: FT 340, E():1.4e-15, (30.1% identity in 186 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YIL096C" FT /fasta_file="fasta/c1919.tab.seq.04537.out" FT misc_feature complement(2237414..2237427) FT /colour=6 FT /note="ctaattaattctag, splice branch and acceptor" FT misc_feature complement(2237531..2237536) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS complement(join(2238447..2238688,2238733..2238880, FT 2238919..2239568,2239619..2240102)) FT /colour=7 FT /gene="SPCC1919.14c" FT /label=SPCC1919.14c FT /note="SPCC1919.14c, len:507, LOW SIMILARITY:Saccharomyces FT cerevisiae, YNL039W, TFC5_YEAST, transcription factor FT tfiii b component, (594 aa), fasta scores: opt: 339, FT E():2.2e-17, (23.7% identity in 498 aa)" FT /note="SPCC1919.14c, len:507, SIMILARITY:Saccharomyces FT cerevisiae, TFC5_YEAST, transcription factor tfiiib b FT component, (594 aa), fasta scores: opt: 339, E():5.6e-12, FT (23.7% identity in 498 aa)" FT /product="putative transcription factor TFIIIB subunit; FT Myb family DNA-binding protein; similar to S. cerevisiae FT TFC5" FT /fasta_file="fasta/c1919.tab.seq.04538.out" FT misc_feature complement(2238689..2238705) FT /colour=6 FT /note="ataaccatttaaattag, splice branch and acceptor" FT misc_feature complement(2238727..2238732) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature complement(2238881..2238892) FT /colour=6 FT /note="ctgacatggcag, splice branch and acceptor" FT misc_feature complement(2238913..2238918) FT /colour=6 FT /note="gtatgg, splice donor sequence" FT misc_feature complement(2239569..2239583) FT /colour=6 FT /note="ttaataacatcatag, splice branch and acceptor" FT misc_feature complement(2239613..2239618) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature complement(2239948..2240155) FT /colour=7 FT /note="putative Intron predicted by HMM_intron, FT Score=10.79" FT misc_feature 2242653..2242962 FT /note="nominal overlap with cosmid SPCC790, EM:AL031855 S. FT pombe chromosome 3" FT misc_feature 2242789..2242908 FT /note="Match to PF00097 zf-C3HC4, zinc finger, C3HC4 type FT (RING finger) Score 30.84" FT misc_feature complement(2242653..2242962) FT /note="nominal overlap with cosmid SPCC1919, EM:AL035075 FT S. pombe chromosome 3" FT misc_feature 2242788..2242908 FT /colour=9 FT /note="Pfam match to entry PF00097 zf-C3HC4, zinc finger, FT C 3HC4 type (RING finger)" FT misc_feature complement(2242933..2243112) FT /note="low complexity region with similar to Rice, Mouse FT and Human genomic sequence" FT CDS join(2243405..2243654,2243704..2244168,2244219..2244892, FT 2244941..2246254) FT /colour=7 FT /gene="pep3" FT /gene="SPCC790.02" FT /label=pep3 FT /note="SPCC790.02, len:900, NOTE: May have an additional C- FT term exon, SIMILARITY:Drosophila melanogaster, DOR_DROME, FT deep orange protein., (1002 aa), fasta scor es: opt: 677, FT E():4.7e-25, (24.9% identity in 947 aa)" FT /product="putative vacuolar membrane protein; possibly FT involved in nuclear migration, polarized growth, and FT mitochondrial morphology (PMID: 11810240); similar to S. FT cerevisiae PEP3" FT /fasta_file="fasta/c790.tab.seq.05025.out" FT misc_feature 2243655..2243660 FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature 2243690..2243703 FT /colour=6 FT /note="ctgaccttcgttag, splice branch and acceptor" FT misc_feature 2244169..2244174 FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature 2244204..2244218 FT /colour=6 FT /note="ttaacatgatttaag, splice branch and acceptor" FT misc_feature 2244893..2244898 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2244924..2244940 FT /colour=6 FT /note="ctaacataatatattag, splice branch and acceptor" FT misc_feature 2247026..2247031 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2247053..2247071 FT /colour=6 FT /note="ttaataacggagagagtag, splice branch and acceptor" FT misc_feature join(2247053..2247348,2247503..2247659) FT /note="Match to PF01694 Rhomboid, Rhomboid family Score FT 142.31" FT misc_feature 2247349..2247354 FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature 2247487..2247502 FT /colour=6 FT /note="ttaacttattttttag, splice branch and acceptor" FT misc_feature 2247726..2249652 FT /note="nominal overlap with cosmid SPCC1840, EM:AL031179 FT S. pombe chromosome 3" FT CDS join(2246869..2247025,2247072..2247348,2247503..2247815) FT /colour=10 FT /gene="SPCC790.03" FT /label=SPCC790.03 FT /note="SPCC790.03, len:248, SIMILARITY:Saccharomyces FT cerevi siae, YPL246C, Q12270, orf ypl246c, (262 aa), FT fasta scores: opt: 250, E():2.7e-07, (27.0% identity in FT 211 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YPL246C" FT /fasta_file="fasta/c790.tab.seq.05026.out" FT misc_feature 2247726..2247815 FT /note="SPCC790.03, see c790 for full length CDS" FT misc_feature 2247726..2249652 FT /note="nominal overlap with cosmid SPCC790, EM:AL031855 S. FT pombe chromosome 3" FT CDS complement(2250179..2256046) FT /colour=2 FT /gene="bgs4" FT /gene="SPCC1840.02c" FT /label=bgs4 FT /note="SPCC1840.02c, len:1955, similarity: to S. pombe, FT put ative 1,3-beta-glucan synthase component, fasta scores, FT opt :6360, (60.3% identity in 1889 aa overlap)" FT /product="putative 1,3-beta-glucan synthase subunit; cell FT wall synthesis" FT /fasta_file="fasta/c1840.tab.seq.04934.out" FT misc_feature 2256046..2261182 FT /note="low complexity gene free region" FT CDS 2261182..2264469 FT /colour=2 FT /gene="pse1" FT /gene="SPCC1840.03" FT /label=pse1 FT /note="SPCC1840.03, len:1095, similarity: to yeast FT IMB3_YEAST, importin beta subunit, fasta scores, opt:2516, FT (38.8% i dentity in 1094 aa overlap)" FT /product="importin beta subunit" FT /fasta_file="fasta/c1840.tab.seq.04935.out" FT CDS join(2264867..2265320,2265367..2265426,2265468..2265565, FT 2265612..2265635,2265676..2265844,2265884..2266356) FT /colour=7 FT /gene="SPCC1840.04" FT /label=SPCC1840.04 FT /note="SPCC1840.04, len:424, similarity: to yeast Q08601, FT hypothetical protein fasta scores, opt:1274, E():0, (49.4% FT identity in 443 aa overlap)" FT /product="metacaspase" FT /fasta_file="fasta/c1840.tab.seq.04936.out" FT misc_feature 2265321..2265326 FT /colour=6 FT /note="gtacgg, splice donor sequence" FT misc_feature 2265353..2265366 FT /colour=6 FT /note="ttaacttgtttaag, splice branch and acceptor" FT misc_feature 2265427..2265432 FT /colour=6 FT /note="gtatgg, splice donor sequence" FT misc_feature 2265453..2265467 FT /colour=6 FT /note="ctaaaacttttttag, splice branch and acceptor" FT misc_feature 2265566..2265571 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2265600..2265611 FT /colour=6 FT /note="ctaactatttag, splice branch and acceptor" FT misc_feature 2265636..2265641 FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature 2265663..2265675 FT /colour=6 FT /note="ctcacatgcatag, splice branch and acceptor" FT misc_feature 2265845..2265850 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2265870..2265883 FT /colour=6 FT /note="ttaacaaaatatag, splice branch and acceptor" FT CDS complement(join(2266558..2268170,2268608..2268707, FT 2268770..2268820)) FT /colour=7 FT /gene="SPCC1840.05c" FT /label=SPCC1840.05c FT /note="SPCC1840.05c, len:587, similarity: to yeast FT YM8L_YEA ST, similar to phosphomannomutases, fasta scores, FT opt:69 9, E():0, (43.2% identity in 606 aa overlap)" FT /product="putative phosphomannomutase" FT /fasta_file="fasta/c1840.tab.seq.04937.out" FT misc_feature complement(2268171..2268185) FT /colour=6 FT /note="ctaatgtttacaaag, splice branch and acceptor" FT misc_feature complement(2268602..2268607) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(2268708..2268728) FT /colour=6 FT /note="ctaacagattgaacgcattag, splice branch and acceptor" FT misc_feature complement(2268764..2268769) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS complement(join(2269784..2269794,2269870..2270388, FT 2270501..2270621)) FT /colour=2 FT /gene="atp5" FT /gene="SPCC1840.06" FT /label=atp5 FT /note="SPCC1840.06c, len:216, similarity: to K. lactis FT G327 3480, oligomycin sensitivity conferring protein, FT fasta scores, opt:486, E():1.1e-28, (40.8% identity in 196 FT aa overlap )" FT /product="putative mitochondrial Fo-ATPase; delta subunit" FT /fasta_file="fasta/c1840.tab.seq.04938.out" FT intron complement(2269795..2269869) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(2269874..2270389) FT /note="Match to PF00213 OSCP, ATP synthase delta (OSCP) FT subunit Score 147.22" FT misc_feature complement(2270389..2270410) FT /colour=6 FT /note="ttaactcttttctcttatttag, splice branch and acceptor" FT misc_feature complement(2270495..2270500) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS complement(2271537..2272535) FT /colour=7 FT /gene="SPCC1840.07c" FT /label=SPCC1840.07c FT /note="SPCC1840.07c, len:332, similarity: C. elegans, FT Q2750 0, serine-threonine protein phosphatase, fasta FT scores, opt: 97, E(): 0.0031, (23.5% identity in 260 aa FT overlap)" FT /product="putative phosphatase; no apparent S. cerevisiae FT ortholog" FT /fasta_file="fasta/c1840.tab.seq.00014.out" FT CDS complement(2273059..2274744) FT /colour=12 FT /gene="SPCC1840.08c" FT /label=SPCC1840.08c FT /note="SPCC1840.08c, len:561, similarity: to S. pombe FT YB1D_ SCHPO, hypothetical, fasta scores, opt:317, E(): FT 1.1e-05, ( 22.7% identity in 497 aa overlap), contains #" FT /product="hypothetical protein; similar to S. pombe FT SPAC959.05C, and SPBC3D6.13C; Pfam-B_33998; has signal FT sequence, and putative membrane attachment site; possibly FT S. pombe specific" FT /fasta_file="fasta/c1840.tab.seq.04940.out" FT CDS complement(2275268..2276098) FT /colour=10 FT /gene="SPCC1840.09" FT /label=SPCC1840.09c FT /note="SPCC1840.09c, len:276, similarity: to yeast YLR290C, FT Q05892, hypothetical, fasta scores, opt:424, E():2.5e-18, FT (34.3% identity in 286 aa overlap)" FT /product="hypothetical protein; similar to S. cerevisiae FT YLR290C" FT /fasta_file="fasta/c1840.tab.seq.04941.out" FT CDS join(2278802..2278826,2278881..2279049,2279113..2279203) FT /colour=2 FT /gene="lsm8" FT /gene="SPCC1840.10" FT /label=lsm8 FT /note="SPCC1840.10, len:94, similarity: to yeast FT YJZ2_YEAST , splicing factor, (128 aa), fasta scores, FT opt:170, E():1.2 e-09, (38.5%% identity in 78 aa overlap)" FT /product="U6 snRNA-associated protein; pre-mRNA splicing FT factor; similar to S. cerevisiae LSM8" FT /fasta_file="fasta/c1840.tab.seq.04942.out" FT misc_feature 2278827..2278832 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2278861..2278880 FT /colour=6 FT /note="ctaatatagatgttcgttag, splice branch and acceptor" FT misc_feature 2278880..2279050 FT /note="Match to PF01423 Sm, Sm protein Score 64.15" FT misc_feature 2279050..2279055 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2279096..2279112 FT /colour=6 FT /note="ctaatagttatttttag, splice branch and acceptor" FT misc_feature 2279571..2282725 FT /note="nominal overlap with cosmid SPCC965, EM:AL023590 FT S.pombe chromosome 3" FT misc_feature 2279571..2282725 FT /note="nominal overlap with cosmid SPCC1840, EM:AL031179 FT S. pombe chromosome 3" FT misc_feature 2282813..2282818 FT /note="gtaagt, splice donor sequence" FT misc_feature 2282904..2282926 FT /note="ttaacttctcactttctttgtag, splice branch and acceptor" FT CDS join(2285973..2286013,2286054..2286171,2286431..2287129) FT /EC_number="3.6.3.14" FT /colour=7 FT /gene="vma8" FT /gene="SPCC965.03" FT /label=vma8 FT /note="SPCC965.03, vacuolar ATP synthase subunit, FT len:285aa , similar eg. to YEL051W, VATD_YEAST, P32610, FT vacuolar ATPs ynthase subunit d, (256aa), fasta scores, FT opt:913, E():0,(6 2.9% identity in 221 aa overlap)" FT /product="putative vacuolar ATP synthase subunit; V-type FT ATPase D subunit; vacuolar proton pump component; V1 FT sector" FT /fasta_file="fasta/c965.tab.seq.04750.out" FT misc_feature 2286012..2286614 FT /colour=9 FT /note="Pfam match to entry PF01813 ATP-synt_D, ATP FT synthase subunit D, score 360.50, E-value 1.8e-104" FT misc_feature 2286014..2286019 FT /note="gtacgc, splice donor sequence" FT misc_feature 2286041..2286053 FT /note="ctaattttattag, splice branch and acceptor" FT misc_feature 2286172..2286177 FT /note="gtaagt, splice donor sequence" FT misc_feature 2286413..2286430 FT /note="ctaatgatatcttgatag, splice branch and acceptor" FT CDS complement(join(2287897..2289993,2290095..2290127)) FT /colour=7 FT /gene="SPCC965.04c" FT /label=SPCC965.04c FT /note="SPCC965.04c, len:709aa, similar eg. to YPR024W, FT YME1_YEAST, P32795, protease of theS EC18/CDC48/PAS1 FT family of ATPases (AAA) , (747aa), fasta sc ores, opt:1739, FT E():0, (47.8% identity in 651 aa overlap),a lso similar FT eg. to E. coli, FTSH_ECOLI, P28691, cell divisi on protein FT ftsh; ATP-dependent zinc metallopeptidase, (644a a), fasta FT scores, opt:1361, E():0, (44.5% identity in 542aa overlap)" FT /product="putative metallopeptidase" FT /fasta_file="fasta/c965.tab.seq.04751.out" FT misc_feature complement(2287939..2288541) FT /note="Match to PF01434 Peptidase_M41, Peptidase family FT M41 Score 409.28" FT misc_feature complement(2288563..2289123) FT /note="Match to PF00004 AAA, ATPases associated with FT various cellular activities (AAA) Score 305.14" FT misc_feature complement(2288658..2289224) FT /note="Pfam match to entry AAA PF00004, ATPases FT associatedw ith various cellular activities (AAA)" FT misc_feature complement(2289085..2289108) FT /fasta_file="c965.seq.0043.out" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT misc_feature complement(2289994..2290015) FT /note="ctaactcattacttgacgatag, splice branch and acceptor" FT misc_feature complement(2290089..2290094) FT /note="gtaagt, splice donor sequence" FT CDS complement(2291904..2292881) FT /colour=2 FT /gene="thp1" FT /gene="SPCC965.05c" FT /label=thp1 FT /note="SPCC965.05c, len:325aa, similar eg. to H. sapiens, FT Q13569, g/t mismatch-specific thymine DNA glycosylase, FT (410aa), fasta scores, opt:362, E():2.2e-10, (35.8% ide FT ntity in 179 aa overlap)" FT /product="mismatch-specific thymine DNA glycosylase; no FT apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c965.tab.seq.00017.out" FT CDS 2294187..2295221 FT /colour=7 FT /gene="SPCC965.06" FT /label=SPCC965.06 FT /note="SPCC965.06, len: 344aa, similar eg. to , E1249836, FT potassium channel beta subunit fragment, (328aa), fasta FT scores, opt:1033, E():0, (47 .4% identity in 325 aa FT overlap) also similar eg. to O23016 T1G11.6 PROTEIN, (328 FT aa), fasta scores, opt:1033, E():0, (48.9% identity in 325 FT aa overlap)" FT /product="putative potassium channel subunit" FT /fasta_file="fasta/c965.tab.seq.04753.out" FT CDS complement(2296275..2296967) FT /colour=7 FT /gene="SPCC965.07c" FT /label=SPCC965.07c FT /note="SPCC965.07c, len:230aa, similar eg. (to the FT terminal 2/3 of) to YNL229C, URE2_YEAST, P23202, nitrogen FT catabolite repression regulator, (354aa),fasta scores, FT opt:433, E():0, (36.8% identity in 247 aa over lap), also FT similar eg. (along full length) to B. cepacia, Q 45073, FT hypothetical 23.3 kD protein, (205aa), fasta scores, FT opt:331, E():4.3e-18, (35.7% identity in 210 aa overlap)" FT /product="glutathione S-transferase" FT /fasta_file="fasta/c965.tab.seq.04754.out" FT misc_feature complement(2296326..2296955) FT /note="Match to PF00043 GST, Glutathione S-transferases. FT Score 128.35" FT misc_feature complement(2296326..2296967) FT /note="Pfam match to entry gluts PF00043, Glutathione S- FT tra nsferases" FT CDS complement(2298463..2299590) FT /EC_number="5.1.1.1" FT /colour=7 FT /gene="SPCC965.08c" FT /label=SPCC965.08c FT /note="SPCC965.08c, len:375aa, similar eg. to E. coli, FT ALR1_ECOLI, P29743, alanine racemase , (359aa), fasta FT scores, opt:858, E():0, (43.9% identity in 376 aa overlap), FT also similar eg. to S. typhimurium, ALR1_S ALTY, P06655, FT alanine racemase, (359aa), fasta scores, opt: 823, E():0, FT (43.1% identity in 376 aa overlap)" FT /product="putative alanine racemase; no apparent S. FT cerevisiae ortholog" FT /fasta_file="fasta/c965.tab.seq.04755.out" FT misc_feature complement(2298472..2299497) FT /note="Match to PF00842 Ala_racemase, Alanine racemase FT Score 360.71" FT CDS 2301596..2302414 FT /colour=7 FT /gene="SPCC965.09" FT /label=SPCC965.09 FT /note="SPCC965.09, putative nitrilase, len:272aa, similar FT eg . to YLR351C, YL85_YEAST, P49954, nitrilase, (291aa), FT fastas cores, opt:236, E():5.9e-23, (28.8% identity in 281 FT aa over lap)" FT /product="hydroalse; nitrilase related" FT /fasta_file="fasta/c965.tab.seq.04756.out" FT CDS 2303449..2305026 FT /colour=7 FT /gene="SPCC965.10" FT /label=SPCC965.10 FT /note="SPCC965.10, len:525aa, similar eg. to YDR034C, FT LY14_YEAST, P4097 1, transcriptional activator of lysine FT pathway genes, (790a a), fasta scores, opt:160, E():1.1e- FT 09, (22.3% identity in4 94 aa overlap)" FT /product="putative transcriptional regulator; zinc finger FT protein; fungal binuclear cluster domain" FT /fasta_file="fasta/c965.tab.seq.04757.out" FT misc_feature 2303503..2303607 FT /note="Match to PF00172 Zn_clus, fungal Zn(2)-Cys(6) FT binuclear cluster domain Score 41.02" FT misc_feature 2303503..2303619 FT /note="Pfam match to entry Zn_clus PF00172, fungal Zn(2)- FT Cy s(6) binuclear cluster domain" FT misc_feature 2303506..2303592 FT /note="PS00463 fungal Zn(2)-Cys(6) binuclear cluster FT domain signature" FT CDS complement(2305037..2306650) FT /colour=7 FT /gene="SPCC965.11c" FT /label=SPCC965.11c FT /note="SPCC965.11c, len:537aa, simila r eg. to YFL055W, FT AGP3_YEAST, P43548, amino acid permease,( 558aa), fasta FT scores, opt:1592, E():0, (46.2% identity in52 2 aa FT overlap)" FT /product="APC amino acid transporter" FT /fasta_file="fasta/c965.tab.seq.04758.out" FT misc_feature complement(2305184..2306530) FT /note="Match to PF00324 aa_permeases, Amino acid permease FT Score 617.06" FT misc_feature complement(2305184..2306533) FT /note="Pfam match to entry aa_permeases PF00324, Amino FT acid permeases" FT intron 2306893..2306948 FT /note="confirmed in 5'UTR" FT CDS 2307192..2308442 FT /colour=7 FT /gene="SPCC965.12" FT /label=SPCC965.12 FT /note="SPCC965.12, len:416aa, similar eg. to S. pombe, FT O14124, dipeptidase, (409aa), fasta score s, opt:978, FT E():0, (46.8% identity in 361 aa overlap), also similar FT eg. to R. norvegicus, MDP1_RAT, P31430, microsoma l FT dipeptidase , (410aa), fasta scores, opt:949, E( ):0, FT (43.6% identity in 376 aa overlap)" FT /product="putative dipeptidase; no apparent S. cerevisiae FT ortholog" FT /fasta_file="fasta/c965.tab.seq.04759.out" FT misc_feature 2307213..2308388 FT /note="Match to PF01244 Renal_dipeptase, Renal dipeptidase FT Score 323.89" FT rRNA complement(2309022..2309219) FT /note="5s rRNA gene" FT misc_feature complement(2309220..2313380) FT /note="low complexity gene free region" FT CDS 2313380..2314993 FT /colour=7 FT /gene="SPCC965.13" FT /label=SPCC965.13 FT /note="SPCC965.13, len:537aa, similar eg.to S. pombe, FT CAR1_SCHPO, P33532, amiloride resistance protein ; car1, FT (526aa), fasta scores, opt:1360, E():0, (43.3% iden tity FT in 487 aa overlap), contains PS00216 Sugar transport p FT roteins signature 1)" FT /product="major facilitator superfamily; putative FT amilorlide efflux transporter; similar to S. pombe car1" FT /fasta_file="fasta/c965.tab.seq.04760.out" FT misc_feature 2313812..2313862 FT /note="PS00216 Sugar transport proteins signature 1" FT CDS 2315702..2316190 FT /colour=7 FT /gene="SPCC965.14c" FT /label=SPCC965.14c FT /note="SPCC965.14c, len:161aa" FT /product="putative Cytidine and deoxycytidylate deaminase FT zinc binding protein" FT /fasta_file="fasta/c965.tab.seq.04761.out" FT misc_feature 2315876..2315983 FT /note="Match to PF00383 dCMP_cyt_deam, Cytidine and FT deoxycytidylate deaminase zinc binding region Score 31.11" FT misc_feature 2316295..2317660 FT /note="nominal overlap with cosmid SPCC1494, EM:AL023776 FT S.pombe chromosome 3" FT misc_feature 2316295..2317660 FT /note="nominal overlap with cosmid SPCC965, EM:AL023590 S. FT pombe chromosome 3" FT misc_feature join(2317396..2318021,2318063..2318231) FT /colour=9 FT /note="Match to PF00671 Fe_Asc_oxidored, Iron/Ascorbate FT oxidoreductase family Score 57.76" FT misc_feature 2318022..2318027 FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature 2318047..2318062 FT /colour=6 FT /note="ctaaccatttacatag, splice branch and acceptor" FT CDS complement(join(2318888..2318968,2319100..2319144, FT 2319298..2319408,2319479..2319576,2319803..2319866)) FT /colour=7 FT /gene="SPCC1494.02c" FT /label=SPCC1494.02c FT /note="SPCC1494.02c, len:85, splicing very tentative, 1st FT exon may not be real - also last two exons, FT SIMILARITY:Homo sapiens, T2DB_HUMAN, transcription FT initiation factor tfiid 18 kD subunit TAFII-18, (124 aa), FT fasta scores: opt: 258, E():8e-12, (44.3% identity in 79 FT aa)" FT /product="putative transcription initiation factor TFIID FT subunit; similar to S. cerevisiae TAF19" FT /fasta_file="fasta/c1494.tab.seq.04789.out" FT misc_feature complement(2318969..2318982) FT /colour=6 FT /note="ctaatgacctaaag, splice branch and acceptor" FT misc_feature complement(2319094..2319099) FT /colour=6 FT /note="gtatga, splice donor sequence" FT misc_feature complement(2319145..2319156) FT /colour=6 FT /note="ttaattttaaag, splice branch and acceptor" FT misc_feature complement(2319292..2319297) FT /colour=6 FT /note="gtatta, splice donor sequence" FT misc_feature complement(2319409..2319423) FT /colour=6 FT /note="ttaactagaatacag, splice branch and acceptor" FT misc_feature complement(2319473..2319478) FT /colour=6 FT /note="gtaggg, splice donor sequence" FT misc_feature complement(2319577..2319591) FT /colour=6 FT /note="cttacttttctttag, splice branch and acceptor" FT misc_feature complement(2319797..2319802) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT LTR complement(2320821..2321169) FT /colour=4 FT /note="tf2 type LTR" FT CDS complement(2321220..2325220) FT /colour=4 FT /gene="SPCC1494.11c" FT /label=tf2 pseudo FT /note="SPCC1494.11c, len:1322aa, TF2 retrotransposable FT element pseudogene" FT /product="retrotransposable element tf2 155 kD protein FT pseudogene" FT /pseudo FT /fasta_file="fasta/c1494.tab.seq.04790.out" FT misc_feature complement(2321223..2325220) FT /note="tf2 type retrotransposon; frameshifted" FT misc_feature complement(2323376..2323915) FT /colour=9 FT /note="Match to PF00078 rvt, Reverse transcriptase (RNA- FT dependent DNA polymerase) Score 154.95" FT LTR complement(2325387..2325735) FT /colour=4 FT /note="tf2 type LTR" FT CDS 2326072..2327550 FT /colour=8 FT /gene="SPCC1494.03" FT /label=SPCC1494.03 FT /note="SPCC1494.03, len:491" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1494.tab.seq.04791.out" FT CDS complement(join(2328054..2329263,2329363..2329448)) FT /colour=7 FT /gene="SPCC1494.04c" FT /label=SPCC1494.04c FT /note="SPCC1494.04c, len:430, SIMILARITY:Saccharomyces FT cerevisiae, TYR1_YEAST, prephenate dehydrogenase [nadp+], FT (452 aa), fasta scores: opt: 1595, E():0, (55.6% identity FT in 432 aa)" FT /product="putative prephenate dehydrogenase [nadp+]" FT /fasta_file="fasta/c1494.tab.seq.04792.out" FT misc_feature complement(2329264..2329279) FT /colour=6 FT /note="ctaacatcataaatag, splice branch and acceptor" FT misc_feature complement(2329357..2329362) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS complement(2330368..2333307) FT /colour=7 FT /gene="SPCC1494.05c" FT /label=SPCC1494.05c FT /note="SPCC1494.05c, len:978, FT SIMILARITY:Schizosaccharomyces pombe, CAB53084, putative FT ubiquitin carboxyl-terminal hydrolase SPCC16A11.12c., (849 FT aa), fasta scores: opt: 1104, E():0, (32.6% identity in FT 933 aa)" FT /product="ubiquitin carboxyl-terminal hydrolase; similar FT to S. cerevisiae UBP12" FT /fasta_file="fasta/c1494.tab.seq.04793.out" FT misc_feature complement(2330440..2330553) FT /colour=9 FT /note="Pfam match to entry UCH-2 PF00443, Ubiquitin FT carboxy l-terminal hydrolases family 2" FT misc_feature complement(2332321..2332374) FT /colour=9 FT /note="Pfam match to entry UCH-1 PF00442, Ubiquitin FT carboxy l-terminal hydrolases family 2" FT CDS complement(2333829..2335616) FT /colour=7 FT /gene="SPCC1494.06c" FT /label=SPCC1494.06c FT /note="SPCC1494.06c, len:594, SIMILARITY:Saccharomyces FT cerevisiae, DBP9_YEAST, putative ATP-dependent RNA FT helicase dbp9., (594 aa), fasta scores: opt: 1019, E():0, FT (51.1% identity in 595 aa)" FT /product="putative ATP-dependent RNA helicase; similar to FT S. cerevisiae DBP9" FT /fasta_file="fasta/c1494.tab.seq.04794.out" FT misc_feature complement(2334354..2334797) FT /colour=9 FT /note="Pfam match to entry helicase_C PF00271, Helicases FT co nserved C-terminal domain" FT misc_feature complement(2334852..2335559) FT /colour=9 FT /note="Pfam match to entry DEAD PF00270, DEAD and DEAH box FT helicases" FT CDS 2337690..2342198 FT /colour=10 FT /gene="SPCC1494.07" FT /label=SPCC1494.07 FT /note="SPCC1494.07, len:1501, SIMILARITY:Saccharomyces FT cerevisiae, YM8B_YEAST, hypothetical 163.6 kD protein in FT pet111-tif11 intergenic region., (1420 aa), fasta scores: FT opt: 426, E():5.8e-20, (24.4% identity in 1496 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YMR259C which has a peroxisomal targeting signal" FT /fasta_file="fasta/c1494.tab.seq.04795.out" FT CDS complement(2342459..2343283) FT /colour=10 FT /gene="SPCC1494.08c" FT /label=SPCC1494.08c FT /note="SPCC1494.08c, len:274, SIMILARITY:Saccharomyces FT cerevisiae, YBI6_YEAST, hypothetical 52.0 kD protein in FT rpl23a-bob1 intergenic region., (466 aa), fasta scores: FT opt: 110, E():1.2, (23.5% identity in 345 aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YBL086C" FT /fasta_file="fasta/c1494.tab.seq.04796.out" FT CDS complement(join(2343956..2344337,2344406..2344497)) FT /colour=8 FT /gene="SPCC1494.09c" FT /label=SPCC1494.09c FT /note="SPCC1494.09c, len:157" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1494.tab.seq.04797.out" FT misc_feature complement(2344338..2344356) FT /colour=6 FT /note="ctaacattggtatcgttag, splice branch and acceptor" FT misc_feature complement(2344400..2344405) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature 2345966..2347804 FT /note="nominal overlap with cosmid SPCC70, EM:AL023794 S. FT pombe chromosome 3" FT misc_feature 2345966..2347803 FT /note="nominal overlap with cosmid SPCC1494, EM:AL023776 FT S. pombe chromosome 3" FT CDS complement(2350265..2350537) FT /colour=7 FT /gene="SPCC70.02c" FT /label=SPCC70.02c FT /note="SPCC70.02c, len:90, predicted transit peptide 1-19 FT aa, SIMILARITY:Saccharomyces cerevisiae, IATP_YEAST, FT atpase inhibitor, mitochondrial ., (85 aa), fasta scores: FT opt: 188, E():1.9e-06, (44.0% identity in 75 aa)" FT /product="putative atpase inhibitor, mitochondrial" FT /fasta_file="fasta/c70.tab.seq.04764.out" FT CDS complement(2351628..2353106) FT /colour=7 FT /gene="SPCC70.03c" FT /label=SPCC70.03c FT /note="SPCC70.03c, len:492, predicted transit peptide 1-35 FT aa, SIMILARITY:Drosophila melanogaster, PUT1_DROME, FT proline oxidase , (669 aa), fasta scores: opt: 407, FT E():5.3e-19, (26.2% identity in 538 aa)" FT /product="putative proline oxidase" FT /fasta_file="fasta/c70.tab.seq.04765.out" FT CDS complement(join(2354471..2354601,2354646..2354813, FT 2354874..2355309)) FT /colour=8 FT /gene="SPCC70.04c" FT /label=SPCC70.04c FT /note="SPCC70.04c, len:244" FT /product="hypothetical protein; sequence orphan; contains FT 4 predicted transmembrane helices" FT /fasta_file="fasta/c70.tab.seq.04766.out" FT misc_feature complement(2354602..2354617) FT /colour=6 FT /note="ctaaccgtacttttag, splice branch and acceptor" FT misc_feature complement(2354640..2354645) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature complement(2354814..2354828) FT /colour=6 FT /note="ctaatgaatgaatag, splice branch and acceptor" FT misc_feature complement(2354868..2354873) FT /colour=6 FT /note="gtaagc, splice donor sequence" FT misc_feature complement(2355310..2359977) FT /note="low-complexity gene-free region" FT CDS complement(2359978..2362323) FT /colour=7 FT /gene="SPCC70.05c" FT /label=SPCC70.05c FT /note="SPCC70.05c, len:781, SIMILARITY:Schizosaccharomyces FT pombe, O94647, protein kinase., (461 aa), fasta scores: FT opt: 654, E():1.5e-23, (29.9% identity in 431 aa)" FT /product="putative serine/threonine protein kinase" FT /fasta_file="fasta/c70.tab.seq.04767.out" FT misc_feature complement(2360098..2360988) FT /colour=9 FT /note="Pfam match to entry pkinase PF00069, Eukaryotic FT prot ein kinase domain" FT misc_feature complement(2360548..2360586) FT /colour=8 FT /note="PS00108 Serine/Threonine protein kinases active- FT site signature" FT misc_feature complement(2362324..2365796) FT CDS join(2365797..2366448,2366485..2367051,2367095..2367252) FT /colour=7 FT /gene="SPCC70.06" FT /label=SPCC70.06 FT /note="SPCC70.06, len:458, SIMILARITY:Schizosaccharomyces FT pombe, O74889, putative leucine permease transcriptional FT regulator., (1024 aa), fasta scores: opt: 706, E():0, FT (38.9% identity in 422 aa)" FT /product="similar to N-terminalof leucine permease FT transcriptional regulator" FT /fasta_file="fasta/c70.tab.seq.04768.out" FT misc_feature 2366370..2366399 FT /colour=8 FT /note="PS00142 Neutral zinc metallopeptidases, zinc FT binding region signature" FT misc_feature 2366449..2366454 FT /colour=6 FT /note="gtaatt, splice donor sequence" FT misc_feature 2366474..2366484 FT /colour=6 FT /note="ctaaccattag, splice branch and acceptor" FT CDS complement(join(2367464..2367766,2367859..2368055, FT 2368109..2368241)) FT /EC_number="2.7.4.9" FT /colour=2 FT /gene="tmp1" FT /gene="tmp" FT /gene="SPCC70.07c" FT /label=tmp1 FT /note="SPCC70.07c, len:210" FT /product="thymidylate kinase; similar to S. cerevisiae FT CDC8" FT /fasta_file="fasta/c70.tab.seq.04769.out" FT misc_feature complement(2367767..2367780) FT /colour=6 FT /note="ctaacattaagtag, splice branch and acceptor" FT intron complement(2367767..2367858) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(2367853..2367858) FT /colour=6 FT /note="gtatat, splice donor sequence" FT misc_feature complement(2367868..2367906) FT /colour=8 FT /note="PS01331 Thymidylate kinase signature" FT misc_feature complement(2368056..2368080) FT /colour=6 FT /note="ctaacttgttacgtttactcgatag, splice branch and FT accepto r" FT intron complement(2368056..2368108) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(2368103..2368108) FT /colour=6 FT /note="gtaaga, splice donor sequence" FT misc_feature complement(2368179..2368202) FT /colour=8 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)" FT intron complement(2368268..2368326) FT /colour=2 FT /note="confirmed intron" FT CDS complement(join(2368704..2369469,2369520..2369536)) FT /colour=7 FT /gene="SPCC70.08c" FT /label=SPCC70.08c FT /note="SPCC70.08c, len:260, SIMILARITY:Mycobacterium FT tuberculosis., TAM_MYCTU, putative trans-aconitate FT methyltransferase, (261 aa), fasta scores: opt: 211, FT E():1e-06, (28.1% identity in 270 aa)" FT /product="putative methyltransferase" FT /fasta_file="fasta/c70.tab.seq.04770.out" FT misc_feature complement(2369310..2369432) FT /note="Match to PF00398 RRNAAD, Ribosomal RNA adenine FT dimethylases Score 34.84" FT misc_feature complement(2369470..2369490) FT /colour=6 FT /note="ttaacgccagaattgaattag, splice branch and acceptor" FT misc_feature complement(2369514..2369519) FT /colour=6 FT /note="gtaagc, splice donor sequence" FT CDS complement(join(2370008..2370492,2370549..2370690)) FT /colour=10 FT /gene="SPCC70.09c" FT /label=SPCC70.09c FT /note="SPCC70.09c, len:208, SIMILARITY:Schizosaccharomyces FT pombe, O60153, hypothetical 14.7 kD protein., (124 aa), FT fasta scores: opt: 214, E():7.4e-07, (57.6% identity in 59 FT aa)" FT /product="hypothetical protein; similar to S. cerevisiae FT YMR295C and YGR273C (low) ;similar to S. pombe FT SPBC19C7.04c; possibly fungal specific" FT /fasta_file="fasta/c70.tab.seq.04771.out" FT misc_feature complement(2370493..2370508) FT /colour=6 FT /note="ctaacatcctttccag, splice branch and acceptor" FT misc_feature complement(2370543..2370548) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT mRNA 2371732..2372816 FT /note="mRNA from SPD146; putative mRNA for SPCC70.10" FT CDS 2371793..2372260 FT /colour=8 FT /gene="SPCC70.10" FT /label=SPCC70.10 FT /note="SPCC70.10, len:155, SIMILARITY:Arabidopsis thaliana, FT AAD49970, f24j5.4., (222 aa), fasta scores: opt: 165, FT E():0.056, (31.6% identity in 114 aa)" FT /product="hypothetical protein; predicted N-terminal FT signal sequence; low similar to cell-surface proteins; FT sequence orphan; proline rich" FT /fasta_file="fasta/c70.tab.seq.04772.out" FT misc_feature complement(2373224..2373253) FT /colour=8 FT /note="PS00659 Glycosyl hydrolases family 5 signature" FT misc_feature 2373830..2373964 FT /note="nominal overlap with cosmid SPCC1827, EM:AL023777 FT S. pombe chromosome 3" FT misc_feature 2373830..2373964 FT /note="nominal overlap with cosmid SPCC70, EM:AL023794 FT S.pombe chromosome 3" FT CDS complement(2375020..2376978) FT /colour=10 FT /gene="SPCC1827.01c" FT /label=SPCC1827.01c FT /note="SPCC1827.01c, len:652, SIMILARITY:Saccharomyces FT cerevisiae, YIJ1_YEAST, hypothetical 84.0 kD protein in FT sga1-ktr7 intergenic region., (721 aa), fasta scores: opt: FT 1469, E():0, (38.6% identity in 666 aa)" FT /product="hypothetical helicase" FT /fasta_file="fasta/c1827.tab.seq.04662.out" FT misc_feature complement(2375155..2375415) FT /colour=9 FT /note="Pfam match to entry helicase_C PF00271, Helicases FT co nserved C-terminal domain" FT CDS complement(join(2377939..2378978,2379097..2379121)) FT /colour=7 FT /gene="SPCC1827.02c" FT /label=SPCC1827.02c FT /note="SPCC1827.02c, len:354, SIMILARITY:Saccharomyces FT cerevisiae, CTPT_YEAST, cholinephosphate FT cytidylyltransferase, (424 aa), fasta scores: opt: 981, FT E():0, (51.2% identity in 291 aa)" FT /product="putative cholinephosphate cytidylyltransferase" FT /fasta_file="fasta/c1827.tab.seq.04663.out" FT misc_feature complement(2378317..2378715) FT /note="Match to PF01467 Cytidylyltransf, FT Cytidylyltransferase Score 190.22" FT misc_feature complement(2378979..2378996) FT /colour=6 FT /note="ctcacaaaagaagaatag, splice branch and acceptor" FT misc_feature complement(2379091..2379096) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT CDS complement(2379385..2380923) FT /colour=7 FT /gene="SPCC1827.03c" FT /label=SPCC1827.03c FT /note="SPCC1827.03c, len:512, SIMILARITY:Saccharomyces FT cerevisiae, FAT2_YEAST, peroxisomal-coenzyme a synthetase, FT (543 aa), fasta scores: opt: 1392, E():0, (47.0% identity FT in 519 aa)" FT /product="putative coenzyme a synthetase" FT /fasta_file="fasta/c1827.tab.seq.04664.out" FT misc_feature complement(2379619..2380839) FT /colour=9 FT /note="Pfam match to entry AMP-binding PF00501, AMP- FT binding enzymes" FT misc_feature complement(2380393..2380428) FT /colour=8 FT /note="PS00455 putative AMP-binding domain signature" FT misc_feature complement(2380831..2380860) FT /colour=8 FT /note="PS00152 ATP synthase alpha and beta subunits FT signature" FT LTR 2381786..2382085 FT /note="degraded TF1-type LTR" FT CDS 2383632..2385434 FT /colour=10 FT /gene="SPCC1827.04" FT /label=SPCC1827.04 FT /note="SPCC1827.04, len:600, SIMILARITY:Saccharomyces FT cerevisiae, Q04311, hypothetical 72.7 kD protein., (632 FT aa), fasta scores: opt: 637, E():1e-28, (32.8% identity in FT 644 aa)" FT /product="hypothetical protein; ankyrin repeat protein; FT putative zinc finger by similarity" FT /fasta_file="fasta/c1827.tab.seq.04665.out" FT misc_feature 2384928..2385011 FT /colour=9 FT /note="Pfam match to entry ank PF00023, Ank repeat" FT CDS complement(join(2385597..2386004,2386082..2386467, FT 2386523..2386559)) FT /colour=10 FT /gene="SPCC1827.05c" FT /label=SPCC1827.05c FT /note="SPCC1827.05c, len:276, SIMILARITY:Saccharomyces FT cerevisiae, YNL0_YEAST, hypothetical 25.4 kD protein in FT cyb5-leu4 intergenic region., (220 aa), fasta scores: opt: FT 386, E():4.3e-17, (31.7% identity in 240 aa)" FT /product=" rrm, RNA recognition motif" FT /fasta_file="fasta/c1827.tab.seq.04666.out" FT misc_feature complement(join(2385894..2386004,2386082..2386186)) FT /note="Match to PF00076 rrm, RNA recognition motif. FT (a.k.a. RRM, RBD, or RNP domain) Score 44.69" FT misc_feature complement(2386005..2386021) FT /colour=6 FT /note="ctaactttttgcattag, splice branch and acceptor" FT misc_feature complement(2386075..2386081) FT /colour=6 FT /note="gtatgg, splice donor sequence" FT misc_feature complement(2386468..2386486) FT /colour=6 FT /note="ttaactcaattgattttag, splice branch and acceptor" FT misc_feature complement(2386517..2386522) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(join(2387065..2388086,2388391..2388418)) FT /note="Match to PF01118 Semialdhyde_dh, Semialdehyde FT dehydrogenase Score 517.47" FT misc_feature complement(2388087..2388100) FT /colour=6 FT /note="ctaaccataaatag, splice branch and acceptor" FT misc_feature 2388124..2391429 FT /note="nominal overlap with plasmid SPCP1E11, EM:AL117183 FT S. pombe chromosome 3" FT misc_feature complement(2388385..2388390) FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature complement(2389686..2389700) FT /colour=6 FT /note="ctaatttcattatag, splice branch and acceptor" FT misc_feature complement(2389755..2389760) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(2390853..2390870) FT /colour=6 FT /note="ctaacttgggttatttag, splice branch and acceptor" FT misc_feature complement(2390912..2390917) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(2391191..2391207) FT /colour=6 FT /note="ctaattgtttcaactag, splice branch and acceptor" FT misc_feature complement(2391251..2391256) FT /colour=6 FT /note="gtatgc, splice donor sequence" FT CDS complement(join(2387050..2388086,2388391..2388427)) FT /colour=7 FT /gene="SPCC1827.06c" FT /label=SPCC1827.06c FT /note="SPCC1827.06c, len:357, SIMILARITY:Ustilago maydis, FT Q99103, aspartate semialdehyde dehydrogenase., (366 aa), FT fasta scores: opt: 1247, E():0, (53.1% identity in 360 aa)" FT /product="aspartate semialdehyde dehydrogenase" FT /fasta_file="fasta/c1827.tab.seq.04667.out" FT intron complement(2388087..2388390) FT /colour=2 FT /note="confirmed intron" FT misc_feature 2388124..2391429 FT /note="nominal overlap with cosmid SPCC1827, EM:AL023777 FT S. pombe chromosome 3" FT misc_feature complement(2388391..2388427) FT /note="NB terminal exon of SPCC1827.06c, see c1827 for FT full length CDS" FT misc_feature complement(2389686..2389700) FT /colour=6 FT /note="ctaatttcattatag, splice branch and acceptor" FT misc_feature complement(2389755..2389760) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(2390853..2390870) FT /colour=6 FT /note="ctaacttgggttatttag, splice branch and acceptor" FT misc_feature complement(2390912..2390917) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(2391191..2391207) FT /colour=6 FT /note="ctaattgtttcaactag, splice branch and acceptor" FT misc_feature complement(2391251..2391256) FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature complement(2391607..2391625) FT /colour=6 FT /note="ctaactgcttttgacctag, splice branch and acceptor" FT misc_feature complement(2391653..2391658) FT /colour=6 FT /note="gtacgt, splice donor sequence" FT misc_feature complement(2391664..2391675) FT /colour=6 FT /note="ctaataaaacag, splice branch and acceptor" FT misc_feature complement(2391698..2391703) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT misc_feature complement(2391834..2391846) FT /colour=6 FT /note="ctaattcgagtag, splice branch and acceptor" FT intron complement(2391834..2391889) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(2391884..2391889) FT /colour=6 FT /note="gtatgc, splice donor sequence" FT misc_feature complement(2391916..2391927) FT /colour=6 FT /note="ctaactgtacag, splice branch and acceptor" FT intron complement(2391916..2391957) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(2391952..2391957) FT /colour=6 FT /note="gtaagg, splice donor sequence" FT CDS join(2393172..2393295,2393341..2393471,2393540..2393987, FT 2394042..2395291) FT /colour=7 FT /gene="SPCP1E11.02" FT /label=SPCP1E11.02 FT /note="SPCP1E11.02, len:650, FT SIMILARITY:Schizosaccharomyces pombe, O43066, FT serine/threonine-protein kinase., (953 aa), fasta scores: FT opt: 1226, E():0, (38.5% identity in 639 aa)" FT /product="putative serine/threonine protein kinase" FT /fasta_file="fasta/p1E11.tab.seq.05290.out" FT misc_feature 2393296..2393301 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 2393323..2393340 FT /colour=6 FT /note="ttaacagcgtatctttag, splice branch and acceptor" FT misc_feature 2393472..2393477 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 2393522..2393539 FT /colour=6 FT /note="ctaacgacttgtctttag, splice branch and acceptor" FT misc_feature 2393615..2393851 FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain Score 52.62" FT misc_feature 2393988..2393993 FT /colour=6 FT /note="gtatgg, splice donor sequence" FT misc_feature 2394025..2394041 FT /colour=6 FT /note="ttaacactagcttttag, splice branch and acceptor" FT misc_feature 2394041..2394253 FT /note="Match to PF00069 pkinase, Eukaryotic protein kinase FT domain Score 38.60" FT intron 2395457..2395594 FT /colour=7 FT /note="Intron predicted by HMM_intron, Score=8.76" FT CDS join(2395575..2396224,2396263..2396512,2396571..2396902, FT 2396948..2396996) FT /colour=8 FT /gene="SPCP1E11.03" FT /label=SPCP1E11.03 FT /note="SPCP1E11.03, len:426" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/p1E11.tab.seq.05291.out" FT misc_feature 2396225..2396230 FT /colour=6 FT /note="gtaaaa, splice donor sequence" FT misc_feature 2396251..2396262 FT /colour=6 FT /note="ctgacatcttag, splice branch and acceptor" FT misc_feature 2396513..2396518 FT /colour=6 FT /note="gtaaag, splice donor sequence" FT misc_feature 2396557..2396570 FT /colour=6 FT /note="ctaactctcaaaag, splice branch and acceptor" FT misc_feature 2396903..2396908 FT /note="gtatgt, splice donor sequence" FT misc_feature 2396936..2396947 FT /note="ctaacaagatag, splice branch and acceptor" FT CDS complement(join(2397525..2398637,2398884..2399048)) FT /colour=10 FT /gene="SPCP1E11.04c" FT /label=SPCP1E11.04c FT /note="SPCP1E11.04c, len:425, SIMILARITY:Saccharomyces FT cerevisiae, YHP7_YEAST, hypothetical 40.7 kD protein, (366 FT aa), fasta scores: opt: 301, E():6.3e-10, (27.9% identity FT in 380 aa overlap)" FT /product="hypothetical protein; similar to S. cerevisiae FT YDR348C" FT /fasta_file="fasta/p1E11.tab.seq.05292.out" FT misc_feature complement(2398638..2398652) FT /colour=6 FT /note="ctaacattttaccag, splice branch and acceptor" FT misc_feature complement(2398878..2398883) FT /colour=6 FT /note="gtaaat, splice donor sequence" FT CDS complement(2399855..2401273) FT /colour=7 FT /gene="SPCP1E11.05c" FT /label=SPCP1E11.05c FT /note="SPCP1E11.05c, len:472, SIMILARITY:Saccharomyces FT cerevisiae, ARE2_YEAST, sterol o-acyltransferase 2, (642 FT aa), fasta scores: opt: 669, E():0, (34.6% identity in 436 FT aa)" FT /product="putative sterol o-acyltransferase 2" FT /fasta_file="fasta/p1E11.tab.seq.05293.out" FT LTR 2401768..2401995 FT /note="TF1 LTR" FT CDS 2402880..2405477 FT /colour=2 FT /gene="apl4" FT /gene="SPCP1E11.06" FT /label=apl4 FT /note="May use inteRNAl initiator MET" FT /note="SPCP1E11.06, len:865, SIMILARITY:Ustilago maydis, FT ADG_USTMA, gamma-adaptin, (853 aa), fasta scores: opt: FT 1856, E():0, (42.8% identity in 867 aa)" FT /product="putative gamma-adaptin" FT /fasta_file="fasta/p1E11.tab.seq.05294.out" FT misc_feature 2403021..2404706 FT /colour=9 FT /note="Pfam match to entry PF01602 Adaptin_N," FT CDS complement(2406015..2406443) FT /colour=10 FT /gene="SPCP1E11.07c" FT /label=SPCP1E11.07c FT /note="SPCP1E11.07c, len:142" FT /product="hypothetical protein; similar to D. melanogasta FT CG15525, N. crassa 1A9.290, A. thaliana T12H1.3; conserved FT motif {LI}.PKKP.WDL{KRE}{DE}{LAV}..{KR}{ML}..L{EN} at C FT terminal; no apparent S. cerevisiae ortholog" FT /fasta_file="fasta/p1E11.tab.seq.05295.out" FT LTR complement(2406774..2407128) FT /note="TF1 LTR" FT CDS join(2407273..2407343,2407404..2407523,2407655..2408246) FT /colour=7 FT /gene="SPCP1E11.08" FT /label=SPCP1E11.08 FT /note="SPCP1E11.08, len:260, SIMILARITY:Saccharomyces FT cerevisiae, YEV6_YEAST, hypothetical 29.7 kD protein in FT rsp5-pak1 intergenic region., (261 aa), fasta scores: opt: FT 1198, E():0, (69.2% identity in 260 aa)" FT /product="conserved protein; putative nuclear pore complex FT associated; similar to S. cerevisiae KRE32" FT /fasta_file="fasta/p1E11.tab.seq.05296.out" FT misc_feature 2407344..2407349 FT /colour=6 FT /note="gtgagt, splice donor sequence" FT misc_feature 2407386..2407403 FT /colour=6 FT /note="ttaacacttctatttcag, splice branch and acceptor" FT misc_feature 2407524..2407529 FT /colour=6 FT /note="gtatgt, splice donor sequence" FT misc_feature 2407642..2407654 FT /colour=6 FT /note="ctaactctatcag, splice branch and acceptor" FT CDS complement(join(2408709..2408969,2409125..2409193)) FT /colour=2 FT /gene="rpp1-3" FT /gene="SPCP1E11.09c" FT /label=rpp1-3 FT /note="SPCP1E11.09c, len:109" FT /product="ribosomal protein (P1C)" FT /fasta_file="fasta/p1E11.tab.seq.05297.out" FT misc_feature complement(2408712..2408951) FT /note="Match to PF00428 60s_ribosomal, 60s Acidic FT ribosomal protein Score 143.30" FT misc_feature complement(2408970..2408985) FT /colour=6 FT /note="ctaacaaaacttctag, splice branch and acceptor" FT intron complement(2408970..2409124) FT /colour=2 FT /note="confirmed intron" FT misc_feature complement(2409116..2409193) FT /note="Match to PF00428 60s_ribosomal, 60s Acidic FT ribosomal protein Score 21.44" FT misc_feature complement(2409119..2409124) FT /colour=6 FT /note="gtaagt, splice donor sequence" FT CDS join(2409642..2409704,2409759..2409837,2409880..2410361) FT /colour=10 FT /gene="SPCP1E11.10" FT /label=SPCP1E11.10 FT /note="SPCP1E11.10, len:207, SIMILARITY:Saccharomyces FT cerevisiae, YCU1_YEAST, hypothetical 24.7 kD protein in FT are1-thr4 intergenic region., (222 aa), fasta scores: opt: FT 329, E():6.8e-14, (33.5% identity in 197 aa)" FT /product="ankyrin repeat protein; similar to S. cerevisiae FT YCR051W" FT /fasta_file="fasta/p1E11.tab.seq.05298.out" FT misc_feature 2409705..2409710 FT /colour=6 FT /note="gtacga, splice donor sequence" FT intron 2409705..2409758 FT /colour=2 FT /note="confirmed intron" FT misc_feature 2409744..2409758 FT /colour=6 FT /note="ctaactattccttag, splice branch and acceptor" FT misc_feature 2409747..2409845 FT /colour=9 FT /note="Pfam match to entry PF00023 ank, Ank repeat," FT misc_feature 2409838..2409843 FT /colour=6 FT /note="gtattt, splice donor sequence" FT intron 2409838..2409879 FT /colour=2 FT /note="confirmed intron" FT misc_feature 2409846..2409938 FT /colour=9 FT /note="Pfam match to entry PF00023 ank, Ank repeat," FT misc_feature 2409869..2409879 FT /colour=6 FT /note="ctaactgtcag, splice branch and acceptor" FT CDS 2410822..2412750 FT /colour=10 FT /gene="SPCP1E11.11" FT /label=SPCP1E11.11 FT /note="SPCP1E11.11, len:642, SIMILARITY:Saccharomyces FT cerevisiae, Q04373, d9719.2p., (656 aa), fasta scores: FT opt: 1089, E():0, (37.1% identity in 655 aa)" FT /product="RNA-binding protein; pumilio family" FT /fasta_file="fasta/p1E11.tab.seq.05299.out" FT misc_feature 2413056..2413180 FT /note="nominal overlap with cosmid c24E4" FT misc_feature 2413056..2413180 FT /note="nominal overlap with SPCP1E11 S. pombe chromosome 3" FT misc_feature 2413277..2413861 FT /note="Match to PF00551 formyl_transf, Formyl transferase FT Score 159.57" FT misc_feature complement(2413295..2414054) FT /note="nominal overlap with cosmid SPCC569 S. pombe FT chromosome 3" FT CDS complement(join(2389527..2389685,2389761..2390852, FT 2390918..2391190,2391257..2391606,2391659..2391663, FT 2391704..2391833,2391890..2391915,2391958..2391971)) FT /colour=7 FT /gene="SPCP1E11.01c" FT /gene="SPCC1827.07c" FT /label=SPCC1827.07c FT /note="SPCC1827.07c, len:564, SIMILARITY:Saccharomyces FT cerevisiae, SYG1_YEAST, syg1 protein., (902 aa), fasta FT scores: opt: 451, E():9.3e-22, (28.7% identity in 585 aa)" FT /product="divalent anion Na+ (DASS) family of membrane FT transporters; similar to S. cerevisiae SYG1" FT /fasta_file="fasta/c1827.tab.seq.04668.out" FT /label=SPCP1E11.01c FT /note="SPCP1E11.01c, len:682, SIMILARITY: Mus musculus, FT Q9Z0U0, polytropic murine leukamia virus receptor, (695 FT aa), fasta scores: opt: 423, E(): 2e-19, (27.8% identity FT in 679 aa). Also shows similar to Saccharomyces cerevisiae, FT SYG1_YEAST, syg1 protein., (902 aa), fasta scores: opt: FT 451, E():8.9e-22, (28.7% identity in 585 aa)" FT /fasta_file="fasta/p1E11.tab.seq.05289.out" FT CDS 2346267..2349161 FT /colour=12 FT /gene="SPCC1494.10" FT /gene="SPCC70.01" FT /label=SPCC1494.10 FT /note="SPCC1494.10, len:>512, SIMILARITY:Rattus norvegicus, FT Q62901, atrophin-1 related protein., (1006 aa), fasta FT scores: opt: 252, E():2.2e-05, (24.2% identity in 525 aa)" FT /product="Pfam-B_20658; similar to S. pombe SPBC1289.10c; FT possibly S. pombe specific" FT /fasta_file="fasta/c1494.tab.seq.04798.out" FT /label=SPCC70.01 FT /note="SPCC70.01, len:964" FT /fasta_file="fasta/c70.tab.seq.04763.out" FT CDS join(2282512..2282812,2282927..2285001) FT /colour=7 FT /gene="SPCC965.02" FT /gene="SPCC1840.12" FT /label=SPCC1840.12 FT /note="SPCC1840.12, see SPCC965.02" FT /product="major facilitator family member" FT /fasta_file="fasta/c1840.tab.seq.04944.out" FT /label=SPCC965.02 FT /note="SPCC965.02, S. pombe sp4 homolog len:791aa, FT similar eg. to S. pombe, O14031,hy pothetical 96.3 kD FT protein., (851aa), fasta scores, opt:148 7, E():0, (35.7% FT identity in 719 aa overlap), also similar to YJL212C, FT YJV2_YEAST, P40897, strong similar to S.pombe isp4 protein, FT (799aa), fasta scores, opt:1453, E():0,(3 1.8% identity FT in 758 aa overlap)" FT /product="similar to oligopeptide transporter (OPT) FT family; isp4-like" FT /fasta_file="fasta/c965.tab.seq.04749.out" FT CDS 2240875..2242953 FT /colour=10 FT /gene="SPCC1919.15" FT /gene="SPCC790.01" FT /label=SPCC1919.15 FT /note="SPCC1919.15, len:692, FT SIMILARITY:Schizosaccharomyces pombe, O74563, hypothetical FT zinc finger protein., (680 aa), fasta scores: opt: 355, FT E():6.4e-13, (22.2% identity in 706 aa)" FT /product="zinc finger protein; zf-C3HC4 type (RING finger)" FT /fasta_file="fasta/c1919.tab.seq.04539.out" FT /label=SPCC790.01 FT /note="SPCC790.01, len:99, SIMILARITY:Schizosaccharomyces FT pombe, O74563, hypothetical zinc finger protein., (680 aa), FT fasta scores: opt: 244, E():4.7e-16, (36.7% identity in FT 9 0 aa)" FT /fasta_file="fasta/c790.tab.seq.05024.out" FT CDS complement(2173523..2178565) FT /colour=7 FT /gene="SPCC1620.14c" FT /gene="SPCC830.01c" FT /label=SPCC1620.14c FT /note="SPCC1620.14c, len:430, FT SIMILARITY:Schizosaccharomyces pombe, CAB54824, putative FT transcriptional regulator,SPAC1250.01 , (1199 aa), fasta FT scores: opt: 1256, E():0, (52.6% identity in 397 aa)" FT /product="putative SWI/SNF2 family transcriptional FT regulator; SNF2 helicase; bromodomain protein; similar to FT S. cerevisiae SNF2" FT /fasta_file="fasta/c1620.tab.seq.05058.out" FT /label=SPCC830.01c FT /note="SPCC830.01c, len:1251, SIMILARITY:Saccharomyces FT cerevisiae, STH1_YEAST, nuclear protein sth1/nps1., (1359 FT aa), fasta scores: opt: 2316, E():0, (56.6% identity in FT 680 aa)" FT /fasta_file="fasta/c830.tab.seq.05277.out" FT CDS complement(2116216..2117325) FT /colour=7 FT /gene="SPCC576.18c" FT /gene="SPCC126.01c" FT /label=SPCC576.18c FT /note="SPCC576.18c, len:139, SIMILARITY:Saccharomyces FT cerevisiae, MT30_YEAST, met30 protein., (640 aa), fasta FT scores: opt: 192, E():2.4e-06, (33.0% identity in 97 aa)" FT /product="WD repeat protein" FT /fasta_file="fasta/c576.tab.seq.04505.out" FT /label=SPCC126.01c FT /note="SPCC126.01c, SIMILARITY:Caenorhabditis elegans., FT SE10_CAEEL, sel-10 protein., (579 aa), fasta scores: opt: FT 298, E():9e-13, (30.7% identity in 189 aa)" FT /fasta_file="fasta/c126.tab.seq.04733.out" FT CDS complement(1989531..1990979) FT /EC_number="4.2.1.2" FT /colour=7 FT /gene="fum1" FT /gene="SPCC18.18c" FT /gene="SPCC290.01c" FT /label=fum1 FT /note="SPCC18.18c, len:81, SIMILARITY:Myxococcus xanthus., FT P95331, fumarate hydratase, (466 aa), fasta scores: opt: FT 332, E():5e-19, (66.7% identity in 78 aa)" FT /product="putative fumarate hydratase; mitochondrial; FT cytoplasmic" FT /fasta_file="fasta/c18.tab.seq.04885.out" FT /note="SPCC290.01c, len:>426, SIMILARITY:Rhizopus oryzae., FT FUMH_RHIOR, fumarate hydratase , (494 aa), fasta s cores: FT opt: 1952, E():0, (71.1% identity in 408 aa)" FT /fasta_file="fasta/c290.tab.seq.05088.out" FT CDS complement(join(1915828..1918122,1918245..1918442)) FT /colour=2 FT /gene="hmt1" FT /gene="SPCC737.09c" FT /gene="SPCC74.08c" FT /label=hmt1 FT /note="SPCC737.09c" FT /product="ABC heavy metal ion efflux transporter" FT /fasta_file="fasta/c737.tab.seq.04486.out" FT /note="SPCC74.08c" FT /fasta_file="fasta/c74.tab.seq.04724.out" FT CDS 1877199..1878386 FT /EC_number="4.6.1.4" FT /colour=7 FT /gene="SPCC1223.14" FT /gene="SPCC297.01" FT /label=SPCC1223.14 FT /note="SPCC1223.14, SIMILARITY:Saccharomyces cerevisiae, FT AROC_YEAST, chorismate synthase, (376 aa), fasta scores: FT opt: 710, E():0, (78.9% identity in 123 aa)" FT /product="chorismate synthase" FT /fasta_file="fasta/c1223.tab.seq.04787.out" FT /label=SPCC297.01 FT /note="SPCC297.01, len:305, SIMILARITY:Saccharomyces FT cerevisiae, AROC_YEAST, chorismate synthase, (376 aa), FT fasta scores: opt: 888, E():0, (62.3% identity in 297 aa)" FT /product="putative chorismate synthase; similar to S. FT cerevisiae ARO2" FT /fasta_file="fasta/c297.tab.seq.05222.out" FT CDS complement(1795879..1796868) FT /colour=7 FT /gene="SPCC1442.16c" FT /gene="SPCC285.01c" FT /label=SPCC1442.16c FT /note="SPCC1442.16c, len:329, SIMILARITY:Mycobacterium FT tube rculosis., O53146, quinone oxidoreductase., (328 aa), FT fasta scores: opt: 723, E():0, (39.2% identity in 324 aa)" FT /product="putative quinone oxidoreductase" FT /fasta_file="fasta/c1442.tab.seq.05043.out" FT /label=SPCC285.01c FT /note="SPCC285.01c, len:116, SIMILARITY:Mycobacterium FT tuberculosis., O53146, quinone oxidoreductase., (328 aa), FT fasta scores: opt: 274, E():2.6e-11, (38.3% identity in FT 115 aa)" FT /product="quinone oxidoreductase" FT /fasta_file="fasta/c285.tab.seq.04799.out" FT CDS complement(1727073..1728016) FT /colour=4 FT /gene="SPCC191.12c" FT /gene="SPCC1450.01c" FT /label=SPCC191.12c FT /note="SPCC191.12c, len:192, ##NOTE## putative pseudogene FT :FASTA alignments with top hits is missing a large section FT and can't find splicing to join to Met. Base-checking FT found no errors. SIMILARITY:Escherichia coli, YCJY_ECOLI, FT hypothetical 34.1 kD protein in tpx-fnr intergenic region, FT (310 aa), fasta scores: opt: 425, E():3.3e-21, (36.3% FT identity in 273 aa)" FT /product="putative pseudogene" FT /pseudo FT /fasta_file="fasta/c191.tab.seq.05188.out" FT /label=SPCC1450.01c FT /note="SPCC1450.01c, len:75, SIMILARITY:Escherichia coli., FT YCJY_ECOLI, hypothetical 34.1 kD protein in tpx-fnr FT intergenic region., (310 aa), fasta scores: opt: 229, FT E():2.4e-10, (50.0% identity in 70 aa)" FT /product="pseudogene" FT /fasta_file="fasta/c1450.tab.seq.05190.out" FT CDS 1729761..1731497 FT /colour=7 FT /gene="SPCC191.13" FT /gene="SPCC1450.02" FT /label=SPCC191.13 FT /note="SPCC191.13, len:110" FT /product="putative transcription factor; bromodomain FT protein; putative RNA polymerase II accessory protein; FT similar to S. cerevisiae BDF1" FT /fasta_file="fasta/c191.tab.seq.05189.out" FT /label=SPCC1450.02 FT /note="SPCC1450.02, len:577, SIMILARITY:Saccharomyces FT cerevisiae, Q06048, hypothetical 77.0 kD protein, (686 aa), FT fasta scores: opt: 531, E():0, (30.8% identity in 608 FT aa)" FT /fasta_file="fasta/c1450.tab.seq.05191.out" FT CDS complement(1667210..1669777) FT /colour=2 FT /gene="gaf1" FT /gene="SPCC1902.01" FT /gene="SPCC417.01c" FT /label=gaf1 FT /note="SPCC1902.01, len:727" FT /product="putative transcription factor; zinc finger FT protein; zf-GATA type" FT /fasta_file="fasta/c1902.tab.seq.05210.out" FT /note="SPCC417.01c, len:169, SIMILARITY:Aspergillus FT oryzae. , AREA_ASPOR, nitrogen regulatory protein area, FT (866 aa), f asta scores: opt: 157, E():3.7e-12, (29.0% FT identity in 176 aa)" FT /fasta_file="fasta/c417.tab.seq.05109.out" FT CDS complement(join(1627447..1627461,1627519..1630020)) FT /colour=7 FT /gene="SPCC777.16c" FT /gene="SPCC663.01c" FT /label=SPCC777.16c FT /note="SPCC777.16c, len:>340, SIMILARITY:Candida albicans, FT CAB59918, hypothetical phosphatase associated protein., FT (856 aa), fasta scores: opt: 525, E():6.3e-23, (34.2% FT identity in 325 aa)" FT /product="sap2 family putative cell cycle dependent FT phosphatase associated protein" FT /fasta_file="fasta/c777.tab.seq.04902.out" FT /label=SPCC663.01c FT /note="SPCC663.01c, len:531, SIMILARITY:Saccharomyces FT cerevisiae, S185_YEAST, sit4-associating protein sap185., FT (1058 aa), fasta scores: opt: 938, E():0, (38.0% identity FT in 463 aa)" FT /product="putative sap2 family cell cycle dependent FT phosphatase-associated protein" FT /fasta_file="fasta/c663.tab.seq.04903.out" FT CDS complement(join(1541848..1542561,1542689..1542814)) FT /colour=2 FT /gene="ssb2" FT /gene="SPCC584.06c" FT /gene="SPCC1753.01c" FT /label=ssb2 FT /note="SPCC584.06c, len:247" FT /product="replication factor-a protein 2" FT /fasta_file="fasta/c584.tab.seq.04660.out" FT /note="SPCC1753.01c, len:279" FT /fasta_file="fasta/c1753.tab.seq.05059.out" FT CDS complement(join(1472681..1472713,1472757..1473200, FT 1473267..1474226)) FT /colour=7 FT /gene="SPCC11E10.09c" FT /gene="SPCC188.01c" FT /label=SPCC11E10.09c FT /note="SPCC11E10.09c, len:478, FT SIMILARITY:Schizosaccharomyces pombe, O13996, putative FT alpha-amylase , (491 aa), fasta scores: opt: 1724, E():0, FT (52.8% identity in 458 aa)" FT /product="putative alpha-amylase; no apparent S. FT cerevisiae ortholog" FT /fasta_file="fasta/c11E10.tab.seq.05276.out" FT /label=SPCC188.01c FT /note="SPCC188.01c, len:>202, FT SIMILARITY:Schizosaccharomyces pombe, O13996, putative FT alpha-amylase , (491 aa), fasta scores: opt: 833, E():0, FT (60.9% identity in 184 aa)" FT /fasta_file="fasta/c188.tab.seq.05147.out" FT CDS complement(join(1440989..1442570,1442683..1442894)) FT /colour=7 FT /gene="SPCC622.20c" FT /gene="SPCC61.01c" FT /label=SPCC622.20c FT /note="SPCC622.20c, len:597, FT SIMILARITY:Schizosaccharomyces pombe, E1319469, major FT facilitator family protein., ( 612 aa), fasta scores: opt: FT 502, E():0, (31.6% identity in 576 aa)" FT /product="MFS multidrug efflux transporter" FT /fasta_file="fasta/c622.tab.seq.04644.out" FT /label=SPCC61.01c FT /note="SPCC61.01c, len:189, SIMILARITY:Schizosaccharomyces FT pombe, O74395, major facilitator family protein., (612 aa), FT fasta scores: opt: 339, E():4e-16, (34.6% identity in FT 185 aa)" FT /product="MFS transporter of unknown specificity" FT /fasta_file="fasta/c61.tab.seq.05065.out" FT CDS 1375072..1382304 FT /colour=2 FT /gene="ags1" FT /gene="mok1" FT /gene="SPCC338.01c" FT /gene="SPCC17A7.01" FT /gene="SPCC1281.01" FT /label=mok1 FT /note="SPCC338.01c, len:>1209" FT /product="alpha-glucan synthase" FT /fasta_file="fasta/c338.tab.seq.04463.out" FT /note="SPCC17A7.01," FT /fasta_file="fasta/c17A7.tab.seq.05172.out" FT /note="SPCC1281.01, len:<1019" FT /fasta_file="fasta/c1281.tab.seq.05138.out" FT CDS complement(1339631..1340998) FT /colour=4 FT /gene="SPCC132.05c" FT /gene="SPCC338.19" FT /label=SPCC132.05c FT /note="SPCC132.05c, len:292, SIMILARITY:Fusarium FT sporotrichioides., O94197, trichothecene 3-o- FT acetyltransferase., (459 aa), fasta scores: opt: 787, FT E():0, (44.9% identity in 296 aa)" FT /product="trichothecene 3-o-acetyltransferase pseudogene" FT /pseudo FT /fasta_file="fasta/c132.tab.seq.05322.out" FT /label=SPCC338.19 FT /note="SPCC338.19, len:340, SIMILARITY:Fusarium FT sporotrichioides., O74644, trichothecene 3-o- FT acetyltransferase., (459 aa), fasta scores: opt: 921, FT E():0, (45.8% identity in 343 aa)" FT /fasta_file="fasta/c338.tab.seq.04447.out" FT CDS 1284062..1286935 FT /colour=7 FT /gene="SPCC23B6.06" FT /gene="SPCC1322.01" FT /label=SPCC23B6.06 FT /note="SPCC23B6.06, len:670, SIMILARITY:Neurospora crassa, FT CYT4_NEUCR, mitochondrial protein cyt-4, (1117 aa), fasta FT scores: opt: 254, E():3.4e-08, (32.9% identity in 140 aa)" FT /product="putative ribonuclease II (RNB) family member" FT /fasta_file="fasta/c23B6.tab.seq.05250.out" FT /label=SPCC1322.01 FT /note="SPCC1322.01, SIMILARITY:Saccharomyces cerevisiae, FT MSU1_YEAST, 3'-5' exonuclease for RNA 3' ss-tail, FT mitochondrial, (969 aa), fasta scores: opt: 239, E():1.2e- FT 08, (27.4% identity in 186 aa)" FT /product="putative 3'-5' exonuclease for RNA 3' ss-tail; FT putative mitochondrial biogenesis protein; similar to S. FT cerevisiae MSU1" FT /fasta_file="fasta/c1322.tab.seq.05092.out" FT CDS 1228445..1229692 FT /colour=2 FT /gene="cig1" FT /gene="SPCC4E9.02" FT /gene="SPCC645.01" FT /label=cig1 FT /note="SPCC4E9.02, len:310" FT /product="B-type cyclin; G1/S phase" FT /fasta_file="fasta/c4E9.tab.seq.05317.out" FT /note="SPCC645.01, len:415" FT /product="B-type cyclin; G1/S transition" FT /fasta_file="fasta/c645.tab.seq.04959.out" FT CDS complement(join(1178772..1179389,1179447..1179725)) FT /colour=7 FT /gene="SPCC4B3.01" FT /gene="SPCP25A2.01c" FT /label=SPCC4B3.01 FT /note="SPCC4B3.01, len:139, SIMILARITY:Rattus norvegicus, FT THTM_RAT, 3-mercaptopyruvate sulfurtransferase, (296 aa), FT fasta scores: opt: 303, E():2.8e-13, (44.3% identity in FT 122 aa)" FT /product="putative 3-mercaptopyruvate sulfurtransferase" FT /fasta_file="fasta/c4B3.tab.seq.05341.out" FT /label=SPCP25A2.01c FT /note="SPCP25A2.01c, len:194, SIMILARITY:Rattus norvegicus, FT THTM_RAT, 3-mercaptopyruvate sulfurtransferase, (296 aa), FT fasta scores: opt: 468, E():3.1e-24, (40.4% identity in FT 171 aa)" FT /fasta_file="fasta/p25A2.tab.seq.05353.out" FT CDS complement(join(1224586..1224900,1224988..1225273, FT 1225317..1225732,1225770..1226552,1226610..1226754, FT 1226799..1227148,1227198..1227296,1227382..1227494, FT 1227561..1227825)) FT /colour=2 FT /gene="rec11" FT /gene="SPCC4E9.01c" FT /gene="SPCC550.16c" FT /label=rec11 FT /note="SPCC550.16c, len:>93" FT /product="meiotic recombination protein; involved in FT sister chromatid cohesion; putative cohesin complex" FT /fasta_file="fasta/c550.tab.seq.04604.out" FT /note="SPCC4E9.01c, len:862" FT /fasta_file="fasta/c4E9.tab.seq.05316.out" FT CDS complement(join(1326097..1329030,1329076..1329207)) FT /colour=10 FT /gene="SPCC1322.17c" FT /gene="SPCC132.01c" FT /label=SPCC1322.17c FT /note="SPCC1322.17c, len:648, SIMILARITY:Candida albicans, FT O94068, conserved protein, (1018 aa), fasta scores: opt: FT 629, E():1.7e-29, (31.3% identity in 696 aa)" FT /product="conserved protein; similar to S. cerevisiae FT YPL009C" FT /fasta_file="fasta/c1322.tab.seq.05108.out" FT /label=SPCC132.01c FT /note="SPCC132.01c, len:548, SIMILARITY:Saccharomyces FT cerevisiae, Q12532, hypothetical 119.1 kD protein ypl009c., FT (1038 aa), fasta scores: opt: 840, E():0, (33.5% FT identity in 576 aa)" FT /fasta_file="fasta/c132.tab.seq.05318.out" FT CDS join(1402430..1402568,1402800..1403072,1403191..1403315, FT 1403392..1403451,1403453..1403569) FT /colour=4 FT /gene="wtf1-psuedo" FT /gene="SPCC1281.09" FT /gene="SPCC622.21" FT /label=wtf1-pseudo FT /product="wtf pseudo" FT /pseudo FT /fasta_file="fasta/c1281.tab.seq.05146.out" FT /note="SPAC622.21" FT /product="wtf-pseudo" FT /fasta_file="fasta/c622.tab.seq.04624.out" FT CDS 1454142..1455314 FT /EC_number="4.4.1.8" FT /colour=7 FT /gene="SPCC61.06" FT /gene="SPCC11E10.01" FT /label=SPCC61.06 FT /note="SPCC61.06, len:100, SIMILARITY:Emericella nidulans, FT Q12607, cystathionine beta-lyase, (439 aa), fasta scores: FT opt: 352, E():3.2e-19, (58.3% identity in 96 aa)" FT /product="cystathionine beta-lyase" FT /fasta_file="fasta/c61.tab.seq.05070.out" FT /label=SPCC11E10.01 FT /note="SPCC11E10.01, len:290, SIMILARITY:Arabidopsis FT thaliana, METC_ARATH, cystathionine beta-lyase , (464 aa), FT fasta scores: opt: 910, E():0, (52.5% identity in 284 aa)" FT /product="putative cystathionine lyase" FT /fasta_file="fasta/c11E10.tab.seq.05268.out" FT CDS complement(1507066..1511190) FT /colour=7 FT /gene="SPCC188.13c" FT /gene="SPCC584.10c" FT /label=SPCC188.13c FT /note="SPCC188.13c, len:>653, SIMILARITY:Rickettsia FT prowazekii., E1342429, ribonuclease iii, (225 aa), fasta FT scores: opt: 241, E():6.6e-09, (30.5% identity in 220 aa)" FT /product="putative DEAD box helicase; contains 2 RNase III FT signature motifs; possibly degrades double-stranded RNA; FT similar to C elegans mut-7; possibly involved in post FT transcriptional gene silencing; no apparent S. cerevisiae FT ortholog" FT /fasta_file="fasta/c188.tab.seq.05158.out" FT /label=SPCC584.10c FT /note="SPCC584.10c, len:1374, SIMILARITY:Archaeoglobus FT fulg idus., O28814, ATP-dependent RNA helicase, putative., FT (741 aa), fasta scores: opt: 346, E():2.7e-14, (25.2% FT identity i n 497 aa)" FT /product="putative DEAD box helicase with 2 RNase III FT signature motifs and may degrade double-stranded RNA; FT similar to C elegans mut-7; possibly involved in post FT transcriptional gene silencing; no apparent S. cerevisiae FT ortholog" FT /fasta_file="fasta/c584.tab.seq.04648.out" FT CDS complement(1498880..1501564) FT /colour=4 FT /gene="SPCC188.10c" FT /gene="SPCC584.07c" FT /label=SPCC188.10c FT /note="SPCC188.10c, len:819, FT SIMILARITY:Schizosaccharomyces pombe, SPCC188.09c but FT contains stop codons so is probably a pseudogene; 36 aa FT repeat containing" FT /product="pseudo" FT /pseudo FT /fasta_file="fasta/c188.tab.seq.05155.out" FT /label=SPCC584.07c FT /note="pseudogene- full length sequence has 2 stop codons" FT /fasta_file="fasta/c584.tab.seq.04645.out" FT CDS complement(join(1553681..1554288,1554348..1555095)) FT /colour=8 FT /gene="SPCC1753.06c" FT /gene="SPCC162.12" FT /label=SPCC1753.06c FT /note="SPCC1753.06c, len:451" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c1753.tab.seq.05064.out" FT /label=SPCC162.12 FT /note="SPCC162.12, len:348" FT /product="hypothetical serine-rich protein; sequence FT orphan" FT /fasta_file="fasta/c162.tab.seq.04684.out" FT CDS complement(join(1598315..1599430,1599470..1599496)) FT /EC_number="1.2.1.1" FT /colour=7 FT /gene="SPCC13B11.04c" FT /gene="SPCC777.01c" FT /label=SPCC13B11.04c FT /note="SPCC13B11.04c, len:380, SIMILARITY:Candida maltosa, FT FADH_CANMA, glutathione-dependent formaldehyde FT dehydrogenas e, (381 aa), fasta scores: opt: 1813, E():0, FT (68.8% identit y in 381 aa)" FT /product="putative glutathione-dependent formaldehyde FT dehydrogenase" FT /fasta_file="fasta/c13B11.tab.seq.05023.out" FT /label=SPCC777.01c FT /note="SPCC777.01c, len:>61, SIMILARITY:Sparus aurata, FT ADHX_SPAAU, alcohol dehydrogenase class iii, (376 aa), FT fasta scores: opt: 291, E():7.7e-16, (73.2% identity in 56 FT aa)" FT /product="alcohol dehydrogenase class III" FT /fasta_file="fasta/c777.tab.seq.04886.out" FT CDS complement(1709134..1711122) FT /EC_number="6.2.1.1" FT /colour=7 FT /gene="SPCC417.14c" FT /gene="SPCC191.02c" FT /label=SPCC417.14c FT /note="SPCC417.14c, len:171, SIMILARITY:Coprinus cinereus, FT O13441, acetate--coa ligase, (661 aa), fasta scores: opt: FT 7 63, E():0, (67.6% identity in 170 aa)" FT /product="putative acetate-coa ligase" FT /fasta_file="fasta/c417.tab.seq.05122.out" FT /label=SPCC191.02c FT /note="SPCC191.02c, len:662, SIMILARITY:Penicillium FT chrysogenum., ACSA_PENCH, acetyl-coenzyme a synthetase, FT (669 aa), fasta scores: opt: 2756, E():0, (61.5% identity FT in 647 aa)" FT /product="acetyl-coenzyme a synthetase; similar to S. FT cerevisiae ACS2" FT /fasta_file="fasta/c191.tab.seq.05178.out" FT CDS 1766986..1769721 FT /colour=2 FT /gene="ste6" FT /gene="SPCC1450.17" FT /gene="SPCC1442.01" FT /label=ste6 FT /note="SPCC1450.17, len:911" FT /product="guanine-nucleotide releasing factor; involved in FT conjugation" FT /fasta_file="fasta/c1450.tab.seq.05206.out" FT /note="SPCC1442.01," FT /fasta_file="fasta/c1442.tab.seq.05028.out" FT CDS join(1835513..1835609,1835655..1835852,1835911..1837814) FT /colour=10 FT /gene="SPCC285.18" FT /gene="SPCC1223.01" FT /label=SPCC285.18 FT /note="SPCC285.18, SIMILARITY:Saccharomyces cerevisiae, FT Q05580, chromosome iv cosmid 9954., (639 aa), fasta FT scores: opt: 604, E():1.9e-31, (36.4% identity in 294 aa)" FT /product="zinc finger protein; zf-C2H2 type; zf-C3HC4 type FT (RING finger)" FT /fasta_file="fasta/c285.tab.seq.04816.out" FT /label=SPCC1223.01 FT /note="SPCC1223.01, len:732, SIMILARITY:Saccharomyces FT cerevisiae, Q05580, YDR266C, chromosome iv cosmid 9954., FT (639 aa), fasta scores: opt: 738, E():0, (31.2% identity FT in 554 aa)" FT /fasta_file="fasta/c1223.tab.seq.04774.out" FT CDS complement(1886862..1887554) FT /colour=8 FT /gene="SPCC297.06c" FT /gene="SPCC737.01c" FT /label=SPCC297.06c FT /note="SPCC297.06c, len:46" FT /product="hypothetical protein; sequence orphan" FT /fasta_file="fasta/c297.tab.seq.05226.out" FT /label=SPCC737.01c FT /note="SPCC737.01c, len:230" FT /fasta_file="fasta/c737.tab.seq.04478.out" FT CDS complement(1949478..1952873) FT /colour=10 FT /gene="SPCC74.07c" FT /gene="SPCC18.01c" FT /label=SPCC74.07c FT /note="SPCC74.07c," FT /product="hypothetical protein; SUN family; serine-rich FT protein; predicted N-terminal signal sequence" FT /fasta_file="fasta/c74.tab.seq.04732.out" FT /label=SPCC18.01c FT /note="SPCC18.01c, len:1131, SIMILARITY: some at the N FT terminal to Saccharomyces cerevisiae, YM79_YEAST, FT hypothetical 37.4 kD protein in zrc1-faa4 intergenic FT region., (355 aa), fasta scores: opt: 1107, E():0, (48.0% FT identity in 331 aa)" FT /product="hypothetical protein; SUN4 family; serine-rich FT protein; predicted N-terminal signal sequence" FT /fasta_file="fasta/c18.tab.seq.04868.out" FT CDS join(2002192..2002231,2002329..2004382) FT /colour=7 FT /gene="SPCC290.04" FT /gene="SPCC4F11.01" FT /label=SPCC290.04 FT /note="SPCC290.04, SIMILARITY:Saccharomyces cerevisiae, FT GZF3_YEAST, gzf3 protein, (551 aa), fasta scores: opt: 148, FT E():0.074, (25.6% identity in 234 aa)" FT /product="putative transcriptional regulator; zinc finger FT protein; zf-GATA type" FT /fasta_file="fasta/c290.tab.seq.05091.out" FT /label=SPCC4F11.01 FT /note="SPCC4F11.01, len:710, SIMILARITY:Saccharomyces FT cerevisiae, GZF3_YEAST, gzf3 protein, (551 aa), fasta FT scores: opt: 148, E():0.074, (25.6% identity in 234 aa)" FT /fasta_file="fasta/c4F11.tab.seq.05240.out" FT CDS join(2026479..2026599,2026708..2028230) FT /colour=10 FT /gene="SPCC1906.05" FT /gene="SPCC1739.01" FT /label=SPCC1906.05 FT /note="SPCC1906.05, len:378, FT SIMILARITY:Schizosaccharomyces pombe, O14117, spindle FT poison sensitivity related protein., (583 aa), fasta FT scores: opt: 386, E():1.5e-14, (28.2% identity in 390 aa)" FT /product="zinc finger protein; zf-CCCH type" FT /fasta_file="fasta/c1906.tab.seq.04609.out" FT /label=SPCC1739.01 FT /note="SPCC1739.01," FT /fasta_file="fasta/c1739.tab.seq.04574.out" FT CDS complement(2080321..2081562) FT /colour=8 FT /gene="SPCPB1C11.04c" FT /gene="SPCC576.01c" FT /note="pB1C11.C.cand.1 score = 18.28" FT /product="hypothetical protein; sequence orphan; very low FT similar to alpha-ketoglutarate-dependent taurine FT dioxygenase" FT /fasta_file="fasta/pB1C11.tab.seq.05352.out" FT /note="SPCC576.01c, len:164" FT /fasta_file="fasta/c576.tab.seq.04487.out" FT CDS join(2205198..2205395,2205516..2205768,2205866..2205985, FT 2206038..2206195,2206236..2206384,2206449..2206635) FT /colour=7 FT /gene="SPCC830.12" FT /gene="SPCC1919.01" FT /label=SPCC830.12 FT /note="SPCC830.12, SIMILARITY:Emericella nidulans, FT AAD38851, calcium/calmodulin dependent protein kinase c., FT (518 aa), fasta scores: opt: 135, E():0.06, (28.8% FT identity in 111 aa)." FT /product="putative serine/threonine protein kinase" FT /fasta_file="fasta/c830.tab.seq.05288.out" FT /label=SPCC1919.01 FT /note="SPCC1919.01, , SIMILARITY:Emericella nidulans, FT Q9Y898, calcium/calmodulin dependent protein kinase c., FT (518 aa), fasta scores: opt: 488, E():1.5e-23, (37.9% FT identity in 198 aa)" FT /fasta_file="fasta/c1919.tab.seq.04525.out" FT CDS join(2317342..2318021,2318063..2318348) FT /colour=7 FT /gene="SPCC1494.01" FT /gene="SPCC965.15" FT /label=SPCC965.15 FT /note="SPCC965.15, len:<106aa, similar eg . to P. FT americana, Q40754, flavanone 3-hydroxylase, (369aa) , FT fasta scores, opt:175, E():7.2e-10, (29.0% identity in 10 FT 7 aa overlap)" FT /product="Iron/Ascorbate oxidoreductase family protein; no FT apparent S. cerevisiae ortholog" FT /fasta_file="fasta/c965.tab.seq.04762.out" FT /label=SPCC1494.01 FT /note="SPCC1494.01, len:320, SIMILARITY:Acinetobacter sp. FT adp1., O24838, hypothetical 38.3 kD protein., (333 aa), FT fasta scores: opt: 400, E():1.1e-19, (29.8% identity in FT 315 aa)" FT /fasta_file="fasta/c1494.tab.seq.04788.out" FT CDS complement(2372894..2373979) FT /colour=2 FT /gene="pof7" FT /gene="SPCC70.11c" FT /gene="SPCC1827.08c" FT /label=pof7 FT /note="SPCC70.11c, len:356, SIMILARITY:Saccharomyces FT cerevisiae, Q12347, chromosome xii reading frame orf FT ylr097c., (344 aa), fasta scores: opt: 378, E():4.8e-17, FT (28.5% identity in 355 aa)" FT /product="F-box protein; similar to S. cerevisiae YLR097C" FT /fasta_file="fasta/c70.tab.seq.04773.out" FT /note="SPCC70.11c, len:>356aa" FT /product="F-box protein" FT /fasta_file="fasta/c1827.tab.seq.04661.out" FT misc_feature 2413298..2413861 FT /note="Match to PF00551, formyl_transf, Formyl transferase" FT CDS complement(2416549..2417961) FT /colour=7 FT /gene="SPCC569.07" FT /label=SPCC569.07 FT /note="SPCC569.07, len:470, SIMILARITY:Schizosaccharomyces FT pombe, O94570, putative aminotransferase., (481 aa), fasta FT scores: opt: 2032, E():0, (62.9% identity in 466 aa)" FT /product="putative aromatic aminotransferase" FT /fasta_file="fasta/c569.tab.seq.05072.out" FT LTR 2419026..2419284 FT /note="Tf2-type LTR" FT misc_feature complement(2419612..2420447) FT /note="highly similar to region in SPCC1884 S. pombe FT chromosome 3" FT misc_RNA 2419951..2420699 FT /gene="meu19" FT /product="meiotic expression upregulated; putative non- FT coding RNA meu19; duplicated in c1884" FT misc_feature complement(2420618..2420700) FT /note="highly similar to region in SPCC1884 S. pombe FT chromosome 3" FT CDS complement(2421564..2423000) FT /colour=12 FT /gene="SPCC569.06" FT /label=SPCC569.06 FT /note="SPCC569.06, len:478, SIMILARITY:Schizosaccharomyces FT pombe, O94349, hypothetical 53.6 kD protein., (469 aa), FT fasta scores: opt: 394, E():2.8e-18, (22.5% identity in FT 454 aa)" FT /product="similar to S. pombe SPCC61.05, SPAC26H5.07C; FT possibly S. pombe specific" FT /fasta_file="fasta/c569.tab.seq.05073.out" FT LTR 2423229..2423587 FT /note="Tf1-type LTR" FT CDS 2425236..2426966 FT /colour=7 FT /gene="SPCC569.05c" FT /label=SPCC569.05c FT /note="SPCC569.05c, len:576, FT SIMILARITY:Schizosaccharomyces pombe, O59699, membrane FT transporter., (577 aa), fasta scores: opt: 3245, E():0, FT (83.7% identity in 576 aa)" FT /product="MFS drug efflux transporter of unknown FT specificity" FT /fasta_file="fasta/c569.tab.seq.05074.out" FT misc_feature 2425662..2426963 FT /colour=9 FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT other) transporter" FT CDS complement(2428119..2428484) FT /colour=9 FT /gene="SPCC569.04" FT /label=SPCC569.04 FT /note="SPCC569.04, len:122" FT /product="very hypothetical protein; perhaps pseudo" FT /fasta_file="fasta/c569.tab.seq.05075.out" FT misc_feature 2428680..2431340 FT /note="highly similar to bases 2926..254 of c1884" FT CDS complement(2431234..2432424) FT /colour=12 FT /gene="SPCC569.03" FT /label=SPCC569.03 FT /note="SPCC569.03, len:396, predicted to contain coiled- FT coil regions, SIMILARITY:Schizosaccharomyces pombe, Q9Y7S0, FT hypothetical repeat containing protein., (323 aa), fasta FT scores: opt: 795, E():0, (47.7% identity in 396 aa)" FT /product="hypothetical repeat containing protein; see also FT SPCC569.01 SPCC613.11C; SPBC106.08C; SPCC330.04C; possibly FT S. pombe specific" FT /fasta_file="fasta/c569.tab.seq.05076.out" FT LTR 2433143..2433311 FT /note="Tf1-type LTR" FT CDS 2433512..2433853 FT /colour=12 FT /gene="SPCC569.02c" FT /label=SPCC569.02c FT /note="SPCC569.02c, len:113, FT SIMILARITY:Schizosaccharomyces pombe, CAB61210, FT hypothetical 13.2 kD protein, SPAPJ695.01, (117 aa), fasta FT scores: opt: 506, E():6.3e-30, (67.3% identity in 113 aa)" FT /product="hypothetical protein; similar to SPAPJ695.01C; FT possibly S. pombe specific" FT /fasta_file="fasta/c569.tab.seq.05077.out" FT misc_feature 2435016..2436762 FT /note="region duplicated in c337" FT CDS 2435591..2436562 FT /colour=12 FT /gene="SPCC569.01c" FT /label=SPCC569.01c FT /note="SPCC569.01c, len:323, predicetd to contain coiled- FT coil regions, SIMILARITY:Schizosaccharomyces pombe, Q9Y7S2, FT hypothetical repeat containing protein., (396 aa), fasta FT scores: opt: 795, E():0, (47.7% identity in 396 aa)" FT /product="hypothetical repeat containing protein; FT SPCC569.03 SPCC613.11C; SPBC106.08C; SPCC330.04C; possibly FT S. pombe specific" FT /fasta_file="fasta/c569.tab.seq.05078.out" FT LTR 2438367..2438680 FT /note="Tf2-type LTR" FT misc_feature 2440409..2440632 FT /colour=3 FT /note="3242 3463 SPRRNAISP S.pombe DNA for rRNA gene FT intergenic spacer" FT rRNA 2440440..2448292 FT /colour=4 FT /note="17 7865 SP18RRNAA S.pombe gene encoding 18S, 5.8S, FT and 28S ribosomal RNA" FT misc_feature 2448146..2451539 FT /colour=3 FT /note="936 3463 SPRRNAISP S.pombe DNA for rRNA gene FT intergenic spacer" FT rRNA 2451322..2453783 FT /colour=4 FT /note="7 2471 SP18RRNAA S.pombe gene encoding 18S, 5.8S, FT and 28S ribosomal RNA" SQ Sequence 2453783 BP; 780267 A; 442785 C; 446074 G; 783655 T; 1002 other; gatcagccaa aatggctgat ccagctattt agcaggttaa ggtctcgttc gttatcgcaa 60 ttaagcagac aaatcactcc accaactaag aacggccatg caccaccacc catagaatca 120 agaaagagct ctcaatctgt caatccttac tatgtctgga cctggtgagt ttccccgtgt 180 tgagtcaaat taagccgcag gctccactcc attgtggtgc ccttccgtca attcctttaa 240 gtttcagcct tgcgaccata ctccccccgg aacccaaaga ctttgatttc tcgtaaggtg 300 ccgagcaagt cgataaatga aacattgccc gatccctagt cggcatagtt tatggttaag 360 actacgacgg tatctgatcg tcttcgatcc cctaactttc gttcttgatt aatgaaaaca 420 tccttggcaa atgctttcgc agtagttcgt cttcaataaa tccaagaatt tcacctctga 480 caattgaata cgaatgcccc cgactatccc tattaatcat tacggcggtc ctagaaacca 540 acanaataga accacacgtc ctattttatt attccatgct aatgtattcg agcaaaactt 600 gcctgctttg aacactctaa ttttttcaag gtaaaagtcc tggttcccta ccacgctcaa 660 taaagaacat gagtagtttg ccagaaggtt aacgaccccg gtcatgacca gtaaacacgc 720 cttgcggcgg accagtcgac caggctcaaa gttcaactac gagcttttta actgcaacaa 780 ctttaatata cgctattgga gctggaatta ccgcggctgc tggcaccaga cttgccctcc 840 aattgttcct cgttaaggta tttacattgt actcattcca attacaagac ccgaaagggc 900 cctgcattgt tatttcttgt cactacctcc ccgtgtcggg attgggtaat ttgcgcgcct 960 gctgccttcc ttggatgtgg tagccgtttc tcaggctccc tctccggaat cgaaccctaa 1020 ttccccgtta cccgttaaaa ccatggtagg cctctatcct accatcgaaa gttgataggg 1080 cagaaatttg aatgaaccat cgccggcgca aggccatgcg attcgaaaag ttattatgac 1140 tcaccaaaaa aagcccgaag gcattggttt tttatctaat aaatacatcc cttccaaaaa 1200 agtcgggatt tttagcatgt attagctcta gaattaccac ggttatccaa gtagttgagg 1260 tactatcaaa taaacgataa ctgatttaat gagccattcg cagtttcaca gtacaaaatt 1320 gcttatactt agacatgcat ggcttaatct ttgagacaag catatgacta ctggcaggat 1380 caaccaggta actatcgtta gaggtgagac aaaaagcaga aaagaagaag ataaaaaaat 1440 gttttttttt aaaacttctt tttacttttc acacaccact accgttttta attttttttc 1500 ttcccaacaa aatcaggaag aaaaaaacaa aaacaaaagt tactcaaagg tgaaactgaa 1560 aaaaaaaaaa agagaaaaga aaataaattc ttcctaaatt ttttttttac aatttcccat 1620 tattcctcaa ttaaaaaatt aattttatat gaggttgtct agagatgaac aacatttcct 1680 agttctcttt taaagaacac cggatatatc gtttctctga agacaaggaa attgccagct 1740 tggtatcata atttcctcag attttagcat tccaacaaat aaacattgtt tccaaaatat 1800 catataaata gataaaattg tactccatgt caaagttgaa aatcaaaatc ttcagaagtg 1860 gttcaaacga aatcaaacca catagttttt aataaaaaaa aactacggct gttgatctgt 1920 tgttaccact aaatgacttt ttcagttcaa atgttagtcg aatgaccata catccacaga 1980 aaaaactcat cgagtctcca caagacttcc tctttccatt ttgcaatgga ttcgtgaagc 2040 gcggattctc cagcaggaaa agagaaaaga aaaaatcctt caactctcct ttcaaatctg 2100 ctaaaggata gctaaaaagt cggagtcaag caccgtcacg tagacaactg caactcgctt 2160 tccaacttat ccttgcggta tcaaggtacc gggtttgggg gaaattacaa attttaaaaa 2220 accgatttta caaaaaagat gaaacaaaaa aaaagtttcc aaagagaaag tctccttttc 2280 cacttctttt tccccttctt ctcgttcaac cttttttcta aaaatgtaat ttttaataag 2340 aaaaagaaaa gtatgaaaaa acttgacgga ccttcttttc attcttctgg acaatcaaag 2400 accgttacaa agcaaacaaa aataaaatag taaaattcta tctttctttc caatgcaccg 2460 cgatgccaac acaaagagaa gaatcaaaac aatttccatt ttcccatttt ttcaattctt 2520 agcaaaagga gattagcaag tctttacgaa agttgaaaaa aaaaattcca aatccaaaaa 2580 aaaaaataaa taaaaagttc caaaagctat taaaaactct ttttcctctt ttcttttttt 2640 tttcttttca tcttcttttt tcttttctcc tttcaaccac cactcctttt acatagttcc 2700 ttggacctat ttttcctcga ttttatagaa acatttgtgg ttgtgtgaat ttcgtccatt 2760 tcggtgccta tttcctatcc tttcttccat atccctcctc tctccaccaa aagtcctact 2820 actaccacca gaaaactatc caccacacaa aatcccacta ctccctcctt acttctcctt 2880 attcaacgtt caaatacaaa cgaaaagaaa aagaaaaaca ccatacgaaa atctctttat 2940 tctttatttg tttgttgaaa cccctttttt cttttttcat ctttcgtatc ttttcccttt 3000 tttcctctta ttttatcttt tctttctttt ctttttttta tttgtattga ttcttatttc 3060 tctcattttc cattgaacca tactccattc cctacctaca actacccctt cccacaccca 3120 tctctgactc taccgaccct gaaaaattta aagtcccacc cctctccacc tactctattc 3180 cgtttttttc atattaaaat tggcttttca ataaatattg ttttgttaaa ttataaatta 3240 aatttttctt tattttttca taaatttttc atttccattt tcttttgttt ttcatgcttt 3300 cctcacatgt tttgtatcga aaaatttgca tttttatgtt ccatcccata tttcgcacga 3360 ttttcaatac ctttgtagtt gtttttttgt tttcttattt tttcttttat ttgtttgcac 3420 tttttttgtt ttttccattt tgtttttgaa aaatgttggg aatgtgtagt gtattatgtt 3480 tatgttattt tgtaaatact tgaatgtcat gaaaatcgaa aattacaaag ttggtcaacc 3540 aagctcattt tcattataaa acattacttt tggttaaatt atataaaatg tatttattta 3600 ttttgtaaaa atcctacaaa ttaccttgtt tttttcattt tttctctcca ccttcccata 3660 acatgcccca cccttcccca aggaaaacac actctaaatg catttttttt gcactctggc 3720 ttcagctaca tggatgttta ttactcaaaa ttgtaaaaga aatgcatctc atctatttcc 3780 tctaaattat ctattttctt cctccataca actacctcta ctccctcttt cacttttcaa 3840 cttttgaccc atttgcctgt cgatcttttt cattcttgta aattcacaga acaaaaccaa 3900 acacttgagc ctcatgatgt gttcaacacg tgataaagga cctatcgaat ttcgtaaaga 3960 tgaaaatttt cctttcgaat gactgttttt gcattccagc cttctccatt tcaccaccag 4020 actcatcttt acacccgctt catcagtctt agacaagtaa catcgttact ttttgccaga 4080 tccagccacg catacctgac ctaaatgtgg tttgatgaaa aaaatttttt tttgtttctt 4140 ttgaaaatgt tggatattgt gcatatgtaa ccgcaccaaa attttccaca tatttggtca 4200 agaaattgaa cattcttcta cgtcatgttt ggtgatattt tggggttcta taccagccat 4260 tttcgatgtt tcttttgttg tttgaaaaaa ataaaaataa aaataaaaat aataaataaa 4320 aggtgggttc attaagaata caaataaaaa caacaataaa taaataataa agaaaaacca 4380 ttacagttac agatttcaaa agtaaaaaca taacaacatt ggatcccttt tccacccgtt 4440 atttcctcac aaaatacata ttgttactct caatccatcc atcaaacttt atactatttt 4500 taaaaataaa ttaacctcgt gataattttg tccattttcc acatttggaa acaactttct 4560 gtttttatgt tactacacta ctatatatta tgtacttttt catccgtgtt aaagtaacca 4620 ccattccatc atgatatcct cattatcacc atatccatat ccaatgtaac cgtaaccatg 4680 aaaaatatga cacaccaaaa aaaaaggaaa cccaacctgt tgtaaccaat tttttttttt 4740 tttttttttt tttttttaca cttttaacca catttaccaa ccttatactc tctctctcta 4800 tctctcacac acaagtaacc atgtaaccaa ccctaataat caatacaaat gtaaccctca 4860 ttaaaaatat tacaaaacat aaataaatat tacaaaacat aatatatatc tattatatct 4920 attttctttt cttttctttt ctcttattgg tctttttttt tttaaaacta tatgctattg 4980 ttcttttaac gtacttttaa ctttgtttat cttgtttctg ctttattcta atttatcatt 5040 ttcctttttt tttttactgt tctaaactac tttgcgtact ttttttttac tttaccgtct 5100 tttattattt taacacgctt ggtttgtttg taaaactgtt attcattctt aagcttttta 5160 aaatctatga cattacgtta aacttcaata atgaattctt ctttcacatc tccttccaat 5220 gtccaaaaat gttctcctca gtaaataatg gttagcgtgt gtgtgtgtgt gtgtgttgtg 5280 cgcatttgtt tacaaatgga acttgaaatt tgaaaagggg gaaccaccaa gatagctcct 5340 tgcactgcgt taaatccctc tcctattttg acaattccaa ctcaccaact cattttcaag 5400 gtcttttttt tttttttttt ttacgattca cgacctacct taccacttat cttacctacc 5460 tacctactac tacctaccat acctactacc tatgaactac ttactactac tactacctac 5520 aaaaaaaaaa actttggttg aatatttttt ttactaggat ttgtgcatta cccttacctc 5580 ttttcccttc aaaaagtttt tacttttcca caaaattggg tattgggtat tgagtatttt 5640 cccaccaatt cctaatacta atactactac tactactaat acccccccta ctacaaaaaa 5700 aagttgtctg cgtgtgtgga ctttgaattt attttttctt caaaagtgca ttacccttac 5760 cttttatctc ttcaaaatat ttcaaaggta taaatatact atatactctt tatatatatt 5820 atagggaaaa agttcagacc aaaaaaaaaa tcgactcgct cgactttttc ttctctctcc 5880 ctcttcttcc cccttccccc ttcctcctct cctccttctt cttcttcatc tcttctttct 5940 ttctttcctc caatttttct cttcgaatta gcaagtcttt aattttttgc ctaccaacaa 6000 gaagagaaaa atgaaagaaa taagatgatg gttccttaat ggaacaaatc ttgggaacaa 6060 aggcttaatc tcagcagatc gtaacaacaa ggctactcta ctgcttacaa taccccgttc 6120 cacattaaag tcgtatgcaa tggattcgat tccgcacaag atttcaatgg aatttcatgg 6180 acaagtcaat aaaacacttc cgtttcatca accatcgccc atcttctacg atacaggaga 6240 gtaggaacaa gtcctacctc tatttttata catataaatc atgcggacca aaaaatcgtc 6300 gctttctggc acggattctg gcttagaggc gttcagccgt tatccggcag atgatagctc 6360 cgcggcattg ccttgtcagg cagccgcaaa taccaatgat ctgaatcaac ggttcctctc 6420 gtactaagtt gaattaccat tgcgacgaca cttcatcagt agggtaaaac taacctgtct 6480 cacgacggtc taaacccagc tcacgttccc tattagtggg tgaacaatcc aacgcttacc 6540 gaattctgct tcggtatgat aggaagagcc gacatcgaag aatcaaaaag caacgtcgct 6600 atgaacgctt ggctgccaca agccagttat ccctgtggta acttttctgg cacctctgtc 6660 ctcaaatttc gagggaacaa aggatcgata ggccacactt tcatggtttg tattcacact 6720 gaaaatcaaa atcaagggga cttttaccct tttattctac tcgagatttc tgttctcgat 6780 gagtccccct taggacacct gcgttatctt ttaacagatg tgccgcccca gccaaactcc 6840 ccacctgaca atgtcatcaa cgcggatcag ttcgcgaaga aactttaacg ctagaatatg 6900 ggaaataaat cccaattccg cttcattgat taagtaaaga aacgataaag gtagtggtat 6960 ttcaccggcg tatgccgaaa catactccca cttatcctac accctctatg tctcttcaca 7020 atgtcaaact agagtcaagc tcaacagggt cttctttccc cgctgatttt gcctggcccg 7080 ttccccaggc tgtggtttcg ctagatagta gatagggaca gtgggaatct cgttaatcca 7140 ttcatgcgcg tcactagtta gatgacgagg catttggcta ccttaagaga gtcatagtta 7200 ctcccgccgt ttacccgcgc ttggttgaat ttcttcactt tgacattcag agcactgggc 7260 agaaatcaca ttgcgtcaac accactttct ggccatcgca atgctatgtt ttaattagac 7320 agtcagattc cccttgtccg taccagttct aagttggttg ttaaacgtac gccagtaaga 7380 gcataatccc cgagaaggag aaaagcccga ccaaggactt cccggccgcc aaggtccaag 7440 caggtccaac atcccttctc accccgaaag gcgagaaaag acatcggtcc acgctcagtc 7500 cagcaaccgt tcaggttcca aggcccaacg tacccaaccc ttagagccaa tccttatccc 7560 gaagttacgg atccattttg ccgacttccc ttatctacat tgttctatca actagaggct 7620 gttcaccttg gagacctgct gcggttatga gtacgaccag atgtgaaaac aaggacccga 7680 aggtccattc ttccgttgga ttttcaaggg ccgtcgagag cgcaccggat tcagcatgag 7740 gcgctgaact cttccaaaca ccatacccta gctccggata aaccgatttc agggtagttc 7800 aatggtttgt taaaaagaaa agagaactct tcccagggct cccgccgacg tctccaactt 7860 catttacgtt gccgtgttga ttccaccttc tggttccgga atattaaccg gattcccttt 7920 cgataggagg cacgaaaaat cgtgcaactt tcatacggag cttccctatc tcttaggatc 7980 gactaaccca tgtccaactg ctgttcacat ggaacctttc cccacttcag tcttcaaagt 8040 tctcatttga atatttgcta cttccaccaa gatctgcact agaggctgtt cgacccaggc 8100 tcacgcccaa ggcttcgtca caaacctcca cgcctgccta ctcgtctgag cttctcaaag 8160 ctaacccaga cggtgaggta tgggtagtac gcttaagcgc catccatttt cagggctagt 8220 tcattcggca ggtgagttgt tacacactcc ttagcggatt ccgacttcca tggccaccgt 8280 cctgctgtct agatgaacta acaccttttc tggtgtctga tgagcgtaca ttccggcacc 8340 ttaacctcac gttcggttca tcccgcatcg ccagttctgc ttaccaaaaa tggcccacta 8400 gaaactctca ttcgatggcc cacgtccaat taagcgacaa gggcgtctta catatttaaa 8460 gtttgagaat aggttgagga aattccttcc ccaagacctc taatcattcg ctttacctca 8520 taaaactgat ctgagtttct gctatcctga gggaaacttc ggcaggaacc agctactaga 8580 tggttcgatt agtctttcgc ccctataccc aaatttgaag atcgatttgc acgtcagaat 8640 ctctacgagc ctccaccaga gtttcctctg gcttcaccct attcaggcat agttcaccat 8700 ctttcgggtc ccaacagcta tgctcttact caaacccttc cattgacaaa cttccgggtc 8760 ggtcgatggt gcacgccaca agggcgttcc cacctgcatt cactttcatt tcgcggatgg 8820 gttttcatca cccaaacact cgcatagatg ctagactcct tggtccgtgt ttcaagacgg 8880 gccattgaaa accattatgt cagcatcctt ggcacgaagc cgcagtcctc agtccccagt 8940 ggacgtatta caacaagggc tataaacact ccccaggcag aacccggaaa gccaccttcc 9000 cttattcttt ttccgccccc gaaaactgat gctgacctac cacaggttca gagtgcatag 9060 tctcgcgaag agactactga tctcacccag gtaagactga tttccaatgc ttccctttca 9120 gcaatttcac gtactattta actctctttt caaagttctt ttcatctttc gatcactcta 9180 cttgttcgct atcggtctct cgccaatatt tagctttaga tgaaatttac cacccattta 9240 gagctgcatt cccaaacaac tcgactcttc gaaagcgctt tatatggcat atccaatcga 9300 ccaaagacgg ggttctcacc ctctctgacg tcctgttcca aggaacttag accgatcgtc 9360 tacactcaaa gcagcttctt gaaattacaa ctcggacaac aaaagaaatg ttgccagatt 9420 tcaaatttga gcttttcccg cttcactcgc cgttactgag ggaatcatgg ttattttctt 9480 ttcctgcgct tattgatatg cttaagttca gcgcgtagtc ctacctgatt tgaggtcaaa 9540 taaaaaaggt actgtgaaaa aaaaataact ttttttttcg ttaaggttca aatataaaag 9600 agattaaaac tttttagtta tttttctttc ctaatttctt tttttctatc aaacaaagtg 9660 gtaaaaccta ttacgttcaa tagaaaaaaa aatgaaaaaa ggcatagaaa aataatttca 9720 atcttccttt tgttttcacc aatcgatttc aaactaaatt tatattttaa aaaaaaaaca 9780 aattttcgtt caacacctca tcaaaaatat ttaaaaaaaa cattttttgt gagaagattg 9840 taatgacact caaacaggca tgcctttggt agaacccaaa ggcgcaatgt gcgttcaaag 9900 attcgatgat tcacggaatt ctgcaattca cattacgtat cgcatttcgc tgcgttcttc 9960 atcgatgcga gagccaagag atccgttgct gaaagtttta aataatttta tatattagat 10020 ataattaatt cagacttcaa aaacaaattt caaggtttat aatttaattt tgcttctttt 10080 ccaatttcct tatatttaaa aaaaaagaga aagaatagaa aaatgataaa ataaaataaa 10140 atagtaaaaa agtaatgata tgcttggcat gcaacaaaaa cacaccaaac aaaaatcatc 10200 cactcgtaat atttacaatt tcattttttt tttcatcttt tctcttttct aaacactttt 10260 ttttaataaa aaaatataaa gaaaaagaaa aaaaatcaaa attgaaaata ttttacattt 10320 tcacagaaag gtaaatggat aagagaagaa aaaggtaaaa aaaattccca aaaagttaaa 10380 agatggaaat tttttaaaac cttttcatat aacttttcta atgatccttc cgcaggttca 10440 cctacggaaa ccttgttacg acttttactt cctctaaatg accaagtttg tccaacttct 10500 cggcaatgtt tccgccgttg ccagcagaaa caagccaatc cagaggcctc actaagccat 10560 tcaatcggta gtagcgacgg gcggtgtgta caaagggcag ggacgtattc aacgcaagct 10620 gatgacttgc gcttactagg aattcctcgt tgaagagcaa taattgcaat gctctatccc 10680 cagcacgacg gagtttaaca agattaccca gaccttccgg ccaaggataa aaaatcaaaa 10740 gatttttttc aactcgttgg ctccgtcagt gtagcgcgcg tgcggcccag aacatctaag 10800 ggcatcacag acctgttatt gcctcaaact tccattggct ttatgccaat agtccctcta 10860 agaagctaat gatcagccaa aatggctgat ccagctattt agcaggttaa ggtctcgttc 10920 gttatcgcaa ttaagcagac aaatcactcc accaactaag aacggccatg caccaccacc 10980 catagaatca agaaagagct ctcaatctgt caatccttac tatgtctgga cctggtgagt 11040 ttccccgtgt tgagtcaaat taagccgcag gctccactcc attgtggtgc ccttccgtca 11100 attcctttaa gtttcagcct tgcgaccata ctccccccgg aacccaaaga ctttgatttc 11160 tcgtaaggtg ccgagcaagt cgataaatga aacattgccc gatccctagt cggcatagtt 11220 tatggttaag actacgacgg tatctgatcg tcttcgatcc cctaactttc gttcttgatt 11280 aatgaaaaca tccttggcaa atgctttcgc agtagttcgt cttcaataaa tccaagaatt 11340 tcacctctga caattgaata cgaatgcccc cgactatccc tattaatcat tacggcggtc 11400 ctagaaacca acaaaataga accacacgtc ctattttatt attccatgct aatgtattcg 11460 agcaaaactt gcctgctttg aacactctaa ttttttcaag gtaaaagtcc tggttcccta 11520 ccacgctcaa taaagaacat gagtagtttg ccagaaggtt aacgaccccg gtcatgacca 11580 gtaaacacgc cttgcggcgg accagtcgac caggctcaaa gttcaactac gagcttttta 11640 actgcaacaa ctttaatata cgctattgga gctggaatta ccgcggctgc tggcaccaga 11700 cttgccctcc aattgttcct cgttaaggta tttacattgt actcattcca attacaagac 11760 ccgaaagggc cctgcattgt tatttcttgt cactacctcc ccgtgtcggg attgggtaat 11820 ttgcgcgcct gctgccttcc ttggatgtgg tagccgtttc tcaggctccc tctccggaat 11880 cgaaccctaa ttccccgtta cccgttaaaa ccatggtagg cctctatcct accatcgaaa 11940 gttgataggg cagaaatttg aatgaaccat cgccggcgca aggccatgcg attcgaaaag 12000 ttattatgac tcaccaaaaa aagcccgaag gcattggttt tttatctaat aaatacatcc 12060 cttccaaaaa agtcgggatt tttagcatgt attagctcta gaattaccac ggttatccaa 12120 gtagttgagg tactatcaaa taaacgataa ctgatttaat gagccattcg cagtttcaca 12180 gtacaaaatt gcttatactt agacatgcat ggcttaatct ttgagacaag catatgacta 12240 ctggcaggat caaccaggta actatcgtta gaggtgagac aaaaagcaga aaagaagaag 12300 ataaaaaaat gttttttttt aaaacttctt tttacttttc acacaccact accgttttta 12360 attttttttc ttcccaacaa aatcaggaag aaaaaaacaa aaacaaaagt tactcaaagg 12420 tgaaactgaa aaaaaaaaaa agagaaaaga aaataaattc ttcctaaatt ttttttttac 12480 aatttcccat tattcctcaa ttaaaaaatt aattttatat gaggttgtct agagatgaac 12540 aacatttcct agttctcttt taaagaacac cggatatatc gtttctctga agacaaggaa 12600 attgccagct tggtatcata atttcctcag attttagcat tccaacaaat aaacattgtt 12660 tccaaaatat catataaata gataaaattg tactccatgt caaagttgaa aatcaaaatc 12720 ttcagaagtg gttcaaacga aatcaaacca catagttttt aataaaaaaa aactacggct 12780 gttgatctgt tgttaccact aaatgacttt ttcagttcaa atgttagtcg aatgaccata 12840 catccacaga aaaaactcat cgagtctcca caagacttcc tctttccatt ttgcaatgga 12900 ttcgtgaagc gcggattctc cagcaggaaa agagaaaaga aaaaatcctt caactctcct 12960 ttcaaatctg ctaaaggata gctaaaaagt cggagtcaag caccgtcacg tagacaactg 13020 caactcgctt tccaacttat ccttgcggta tcaaggtacc gggtttgggg gaaattacaa 13080 attttaaaaa accgatttta caaaaaagat gaaacaaaaa aaaagtttcc aaagagaaag 13140 tctccttttc cacttctttt tccccttctt ctcgttcaac cttttttcta aaaatgtaat 13200 ttttaataag aaaaagaaaa gtatgaaaaa acttgacgga ccttcttttc attcttctgg 13260 acaatcaaag accgttacaa agcaaacaaa aataaaatag taaaattcta tctttctttc 13320 caatgcaccg cgatgccaac acaaagagaa gaatcaaaac aatttccatt ttcccatttt 13380 ttcaattctt agcaaaagga gattagcaag tctttacgaa agttgaaaaa aaaaattcca 13440 aatccaaaaa aaaaaataaa taaaaagttc caaaagctat taaaaactct ttttcctctt 13500 ttcttttttt tttcttttca tcttcttttt tcttttctcc tttcaaccac cactcctttt 13560 acatagttcc ttggacctat ttttcctcga ttttatagaa acatttgtgg ttgtgtgaat 13620 ttcgtccatt tcggtgccta tttcctatcc tttcttccat atccctcctc tctccaccaa 13680 aagtcctact actaccacca gaaaactatc caccacacaa aatcccacta ctccctcctt 13740 acttctcctt attcaacgtt caaatacaaa cgaaaagaaa aagaaaaaca ccatacgaaa 13800 atctctttat tctttatttg tttgttgaaa cccctttttt cttttttcat ctttcgtatc 13860 ttttcccttt tttcctctta ttttatcttt tctttctttt ctttttttta tttgtattga 13920 ttcttatttc tctcattttc cattgaacca tactccattc cctacctaca actacccctt 13980 cccacaccca tctctgactc taccgaccct gaaaaattta aagtcccacc cctctccacc 14040 tactctattc cgtttttttc atattaaaat tggcttttca ataaatattg ttttgttaaa 14100 ttataaatta aatttttctt tattttttca taaatttttc atttccattt tcttttgttt 14160 ttcatgcttt cctcacatgt tttgtatcga aaaatttgca tttttatgtt ccatcccata 14220 tttcgcacga ttttcaatac ctttgtagtt gtttttttgt tttcttattt tttcttttat 14280 ttgtttgcac tttttttgtt ttttccattt tgtttttgaa aaatgttggg aatgtgtagt 14340 gtattatgtt tatgttattt tgtaaatact tgaatgtcat gaaaatcgaa aattacaaag 14400 ttggtcaacc aagctcattt tcattataaa acattacttt tggttaaatt atataaaatg 14460 tatttattta ttttgtaaaa atcctacaaa ttaccttgtt tttttcattt tttctctcca 14520 ccttcccata acatgcccca cccttcccca aggaaaacac actctaaatg catttttttt 14580 gcactctggc ttcagctaca tggatgttta ttactcaaaa ttgtaaaaga aatgcatctc 14640 atctatttcc tctaaattat ctattttctt cctccataca actacctcta ctccctcttt 14700 cacttttcaa cttttgaccc atttgcctgt cgatcttttt cattcttgta aattcacaga 14760 acaaaaccaa acacttgagc ctcatgatgt gttcaacacg tgataaagga cctatcgaat 14820 ttcgtaaaga tgaaaatttt cctttcgaat gactgttttt gcattccagc cttctccatt 14880 tcaccaccag actcatcttt acacccgctt catcagtctt agacaagtaa catcgttact 14940 ttttgccaga tccagccacg catacctgac ctaaatgtgg tttgatgaaa aaaatttttt 15000 tttgtttctt ttgaaaatgt tggatattgt gcatatgtaa ccgcaccaaa attttccaca 15060 tatttggtca agaaattgaa cattcttcta cgtcatgttt ggtgatattt tggggttcta 15120 taccagccat tttcgatgtt tcttttgttg tttgaaaaaa ataaaaataa aaataaaaat 15180 aataaataaa aggtgggttc attaagaata caaataaaaa caacaataaa taaataataa 15240 agaaaaacca ttacagttac agatttcaaa agtaaaaaca taacaacatt ggatcccttt 15300 tccacccgtt atttcctcac aaaatacata ttgttactct caatccatcc atcaaacttt 15360 atactatttt taaaaataaa ttaacctcgt gataattttg tccattttcc acatttggaa 15420 acaactttct gtttttatgt tactacacta ctatatatta tgtacttttt catccgtgtt 15480 aaagtaacca ccattccatc atgatatcct cattatcacc atatccatat ccaatgtaac 15540 cgtaaccatg aaaaatatga cacaccaaaa aaaaaggaaa cccaacctgt tgtaaccaat 15600 tttttttttt tttttttttt tttttttaca cttttaacca catttaccaa ccttatactc 15660 tctctctcta tctctcacac acaagtaacc atgtaaccaa ccctaataat caatacaaat 15720 gtaaccctca ttaaaaatat tacaaaacat aaataaatat tacaaaacat aatatatatc 15780 tattatatct attttctttt cttttctttt ctcttattgg tctttttttt tttaaaacta 15840 tatgctattg ttcttttaac gtacttttaa ctttgtttat cttgtttctg ctttattcta 15900 atttatcatt ttcctttttt tttttactgt tctaaactac tttgcgtact ttttttttac 15960 tttaccgtct tttattattt taacacgctt ggtttgtttg taaaactgtt attcattctt 16020 aagcttttta aaatctatga cattacgtta aacttcaata atgaattctt ctttcacatc 16080 tccttccaat gtccaaaaat gttctcctca gtaaataatg gttagcgtgt gtgtgtgtgt 16140 gtgtgttgtg cgcatttgtt tacaaatgga acttgaaatt tgaaaagggg gaaccaccaa 16200 gatagctcct tgcactgcgt taaatccctc tcctattttg acaattccaa ctcaccaact 16260 cattttcaag gtcttttttt tttttttttt ttacgattca cgacctacct taccacttat 16320 cttacctacc tacctactac tacctaccat acctactacc tatgaactac ttactactac 16380 tactacctac aaaaaaaaaa actttggttg aatatttttt ttactaggat ttgtgcatta 16440 cccttacctc ttttcccttc aaaaagtttt tacttttcca caaaattggg tattgggtat 16500 tgagtatttt cccaccaatt cctaatacta atactactac tactactaat acccccccta 16560 ctacaaaaaa aagttgtctg cgtgtgtgga ctttgaattt attttttctt caaaagtgca 16620 ttacccttac cttttatctc ttcaaaatat ttcaaaggta taaatatact atatactctt 16680 tatatatatt atagggaaaa agttcagacc aaaaaaaaaa tcgactcgct cgactttttc 16740 ttctctctcc ctcttcttcc cccttccccc ttcctcctct cctccttctt cttcttcatc 16800 tcttctttct ttctttcctc caatttttct cttcgaatta gcaagtcttt aattttttgc 16860 ctaccaacaa gaagagaaaa atgaaagaaa taagatgatg gttccttaat ggaacaaatc 16920 ttgggaacaa aggcttaatc tcagcagatc gtaacaacaa ggctactcta ctgcttacaa 16980 taccccgttc cacattaaag tcgtatgcaa tggattcgat tccgcacaag atttcaatgg 17040 aatttcatgg acaagtcaat aaaacacttc cgtttcatca accatcgccc atcttctacg 17100 atacaggaga gtaggaacaa gtcctacctc tatttttata catataaatc atgcggacca 17160 aaaaatcgtc gctttctggc acggattctg gcttagaggc gttcagccgt tatccggcag 17220 atgatagctc cgcggcattg ccttgtcagg cagccgcaaa taccaatgat ctgaatcaac 17280 ggttcctctc gtactaagtt gaattaccat tgcgacgaca cttcatcagt agggtaaaac 17340 taacctgtct cacgacggtc taaacccagc tcacgttccc tattagtggg tgaacaatcc 17400 aacgcttacc gaattctgct tcggtatgat aggaagagcc gacatcgaag aatcaaaaag 17460 caacgtcgct atgaacgctt ggctgccaca agccagttat ccctgtggta acttttctgg 17520 cacctctgtc ctcaaatttc gagggaacaa aggatcgata ggccacactt tcatggtttg 17580 tattcacact gaaaatcaaa atcaagggga cttttaccct tttattctac tcgagatttc 17640 tgttctcgat gagtccccct taggacacct gcgttatctt ttaacagatg tgccgcccca 17700 gccaaactcc ccacctgaca atgtcatcaa cgcggatcag ttcgcgaaga aactttaacg 17760 ctagaatatg ggaaataaat cccaattccg cttcattgat taagtaaaga aacgataaag 17820 gtagtggtat ttcaccggcg tatgccgaaa catactccca cttatcctac accctctatg 17880 tctcttcaca atgtcaaact agagtcaagc tcaacagggt cttctttccc cgctgatttt 17940 gcctggcccg ttccccaggc tgtggtttcg ctagatagta gatagggaca gtgggaatct 18000 cgttaatcca ttcatgcgcg tcactagtta gatgacgagg catttggcta ccttaagaga 18060 gtcatagtta ctcccgccgt ttacccgcgc ttggttgaat ttcttcactt tgacattcag 18120 agcactgggc agaaatcaca ttgcgtcaac accactttct ggccatcgca atgctatgtt 18180 ttaattagac agtcagattc cccttgtccg taccagttct aagttggttg ttaaacgtac 18240 gccagtaaga gcataatccc cgagaaggag aaaagcccga ccaaggactt cccggccgcc 18300 aaggtccaag caggtccaac atcccttctc accccgaaag gcgagaaaag acatcggtcc 18360 acgctcagtc cagcaaccgt tcaggttcca aggcccaacg tacccaaccc ttagagccaa 18420 tccttatccc gaagttacgg atccattttg ccgacttccc ttatctacat tgttctatca 18480 actagaggct gttcaccttg gagacctgct gcggttatga gtacgaccag atgtgaaaac 18540 aaggacccga aggtccattc ttccgttgga ttttcaaggg ccgtcgagag cgcaccggat 18600 tcagcatgag gcgctgaact cttccaaaca ccatacccta gctccggata aaccgatttc 18660 agggtagttc aatggtttgt taaaaagaaa agagaactct tcccagggct cccgccgacg 18720 tctccaactt catttacgtt gccgtgttga ttccaccttc tggttccgga atattaaccg 18780 gattcccttt cgataggagg cacgaaaaat cgtgcaactt tcatacggag cttccctatc 18840 tcttaggatc gactaaccca tgtccaactg ctgttcacat ggaacctttc cccacttcag 18900 tcttcaaagt tctcatttga atatttgcta cttccaccaa gatctgcact agaggctgtt 18960 cgacccaggc tcacgcccaa ggcttcgtca caaacctcca cgcctgccta ctcgtctgag 19020 cttctcaaag ctaacccaga cggtgaggta tgggtagtac gcttaagcgc catccatttt 19080 cagggctagt tcattcggca ggtgagttgt tacacactcc ttagcggatt ccgacttcca 19140 tggccaccgt cctgctgtct agatgaacta acaccttttc tggtgtctga tgagcgtaca 19200 ttccggcacc ttaacctcac gttcggttca tcccgcatcg ccagttctgc ttaccaaaaa 19260 tggcccacta gaaactctca ttcgatggcc cacgtccaat taagcgacaa gggcgtctta 19320 catatttaaa gtttgagaat aggttgagga aattccttcc ccaagacctc taatcattcg 19380 ctttacctca taaaactgat ctgagtttct gctatcctga gggaaacttc ggcaggaacc 19440 agctactaga tggttcgatt agtctttcgc ccctataccc aaatttgaag atcgatttgc 19500 acgtcagaat ctctacgagc ctccaccaga gtttcctctg gcttcaccct attcaggcat 19560 agttcaccat ctttcgggtc ccaacagcta tgctcttact caaacccttc cattgacaaa 19620 cttccgggtc ggtcgatggt gcacgccaca agggcgttcc cacctgcatt cactttcatt 19680 tcgcggatgg gttttcatca cccaaacact cgcatagatg ctagactcct tggtccgtgt 19740 ttcaagacgg gccattgaaa accattatgt cagcatcctt ggcacgaagc cgcagtcctc 19800 agtccccagt ggacgtatta caacaagggc tataaacact ccccaggcag aacccggaaa 19860 gccaccttcc cttattcttt ttccgccccc gaaaactgat gctgacctac cacaggttca 19920 gagtgcatag tctcgcgaag agactactga tctcacccag gtaagactga tttccaatgc 19980 ttccctttca gcaatttcac gtactattta actctctttt caaagttctt ttcatctttc 20040 gatcactcta cttgttcgct atcggtctct cgccaatatt tagctttaga tgaaatttac 20100 cacccattta gagctgcatt cccaaacaac tcgactcttc gaaagcgctt tatatggcat 20160 atccaatcga ccaaagacgg ggttctcacc ctctctgacg tcctgttcca aggaacttag 20220 accgatcgtc tacactcaaa gcagcttctt gaaattacaa ctcggacaac aaaagaaatg 20280 ttgccagatt tcaaatttga gcttttcccg cttcactcgc cgttactgag ggaatcatgg 20340 ttattttctt ttcctgcgct tattgatatg cttaagttca gcgcgtagtc ctacctgatt 20400 tgaggtcaaa taaaaaaggt actgtgaaaa aaaaataact ttttttttcg ttaaggttca 20460 aatataaaag agattaaaac tttttagtta tttttctttc ctaatttctt tttttctatc 20520 aaacaaagtg gtaaaaccta ttacgttcaa tagaaaaaaa aatgaaaaaa ggcatagaaa 20580 aataatttca atcttccttt tgttttcacc aatcgatttc aaactaaatt tatattttaa 20640 aaaaaaaaca aattttcgtt caacacctca tcaaaaatat ttaaaaaaaa cattttttgt 20700 gagaagattg taatgacact caaacaggca tgcctttggt agaacccaaa ggcgcaatgt 20760 gcgttcaaag attcgatgat tcacggaatt ctgcaattca cattacgtat cgcatttcgc 20820 tgcgttcttc atcgatgcga gagccaagag atccgttgct gaaagtttta aataatttta 20880 tatattagat ataattaatt cagacttcaa aaacaaattt caaggtttat aatttaattt 20940 tgcttctttt ccaatttcct tatatttaaa aaaaaagaga aagaatagaa aaatgataaa 21000 ataaaataaa atagtaaaaa agtaatgata tgcttggcat gcaacaaaaa cacaccaaac 21060 aaaaatcatc cactcgtaat atttacaatt tcattttttt tttcatcttt tctcttttct 21120 aaacactttt ttttaataaa aaaatataaa gaaaaagaaa aaaaatcaaa attgaaaata 21180 ttttacattt tcacagaaag gtaaatggat aagagaagaa aaaggtaaaa aaaattccca 21240 aaaagttaaa agatggaaat tttttaaaac cttttcatat aacttttcta atgatccttc 21300 cgcaggttca cctacggaaa ccttgttacg acttttactt cctctaaatg accaagtttg 21360 tccaacttct cggcaatgtt tccgccgttg ccagcagaaa caagccaatc cagaggcctc 21420 actaagccat tcaatcggta gtagcgacgg gcggtgtgta caaagggcag ggacgtattc 21480 aacgcaagct gatgacttgc gcttactagg aattcctcgt tgaagagcaa taattgcaat 21540 gctctatccc cagcacgacg gagtttaaca agattaccca gaccttccgg ccaaggataa 21600 aaaatcaaaa gatttttttc aactcgttgg ctccgtcagt gtagcgcgcg tgcggcccag 21660 aacatctaag ggcatcacag acctgttatt gcctcaaact tccattggct ttatgccaat 21720 agtccctcta agaagctaat gatcagccaa aatggctgat ccagctattt agcaggttaa 21780 ggtctcgttc gttatcgcaa ttaagcagac aaatcactcc accaactaag aacggccatg 21840 caccaccacc catagaatca agaaagagct ctcaatctgt caatccttac tatgtctgga 21900 cctggtgagt ttccccgtgt tgagtcaaat taagccgcag gctccactcc attgtggtgc 21960 ccttccgtca attcctttaa gtttcagcct tgcgaccata ctccccccgg aacccaaaga 22020 ctttgatttc tcgtaaggtg ccgagcaagt cgataaatga aacattgccc gatccctagt 22080 cggcatagtt tatggttaag actacgacgg tatctgatcg tcttcgatcc cctaactttc 22140 gttcttgatt aatgaaaaca tccttggcaa atgctttcgc agtagttcgt cttcaataaa 22200 tccaagaatt tcacctctga caattgaata cgaatgcccc cgactatccc tattaatcat 22260 tacggcggtc ctagaaacca acaaaataga accacacgtc ctattttatt attccatgct 22320 aatgtattcg agcaaaactt gcctgctttg aacactctaa ttttttcaag gtaaaagtcc 22380 tggttcccta ccacgctcaa taaagaacat gagtagtttg ccagaaggtt aacgaccccg 22440 gtcatgacca gtaaacacgc cttgcggcgg accagtcgac caggctcaaa gttcaactac 22500 gagcttttta actgcaacaa ctttaatata cgctattgga gctggaatta ccgcggctgc 22560 tggcaccaga cttgccctcc aattgttcct cgttaaggta tttacattgt actcattcca 22620 attacaagac ccgaaagggc cctgcattgt tatttcttgt cactacctcc ccgtgtcggg 22680 attgggtaat ttgcgcgcct gctgccttcc ttggatgtgg tagccgtttc tcaggctccc 22740 tctccggaat cgaaccctaa ttccccgtta cccgttaaaa ccatggtagg cctctatcct 22800 accatcgaaa gttgataggg cagaaatttg aatgaaccat cgccggcgca aggccatgcg 22860 attcgaaaag ttattatgac tcaccaaaaa aagcccgaag gcattggttt tttatctaat 22920 aaatacatcc cttccaaaaa agtcgggatt tttagcatgt attagctcta gaattaccac 22980 ggttatccaa gtagttgagg tactatcaaa taaacgataa ctgatttaat gagccattcg 23040 cagtttcaca gtacaaaatt gcttatactt agacatgcat ggcttaatct ttgagacaag 23100 catatgacta ctggcaggat caaccaggta actatcgtta gaggtgagac aaaaagcaga 23160 aaagaagaag ataaaaaaat gttttttttt aaaacttctt tttacttttc acacaccact 23220 accgttttta attttttttc ttcccaacaa aatcaggaag aaaaaaacaa aaacaaaagt 23280 tactcaaagg tgaaactgaa aaaaaaaaaa agagaaaaga aaataaattc ttcctaaatt 23340 ttttttttac aatttcccat tattcctcaa ttaaaaaatt aattttatat gaggttgtct 23400 agagatgaac aacatttcct agttctcttt taaagaacac cggatatatc gtttctctga 23460 agacaaggaa attgccagct tggtatcata atttcctcag attttagcat tccaacaaat 23520 aaacattgtt tccaaaatat catataaata gataaaattg tactccatgt caaagttgaa 23580 aatcaaaatc ttcagaagtg gttcaaacga aatcaaacca catagttttt aataaaaaaa 23640 aactacggct gttgatctgt tgttaccact aaatgacttt ttcagttcaa atgttagtcg 23700 aatgaccata catccacaga aaaaactcat cgagtctcca caagacttcc tctttccatt 23760 ttgcaatgga ttcgtgaagc gcggattctc cagcaggaaa agagaaaaga aaaaatcctt 23820 caactctcct ttcaaatctg ctaaaggata gctaaaaagt cggagtcaag caccgtcacg 23880 tagacaactg caactcgctt tccaacttat ccttgcggta tcaaggtacc gggtttgggg 23940 gaaattacaa attttaaaaa accgatttta caaaaaagat gaaacaaaaa aaaagtttcc 24000 aaagagaaag tctccttttc cacttctttt tccccttctt ctcgttcaac cttttttcta 24060 aaaatgtaat ttttaataag aaaaagaaaa gtatgaaaaa acttgacgga ccttcttttc 24120 attcttctgg acaatcaaag accgttacaa agcaaacaaa aataaaatag taaaattcta 24180 tctttctttc caatgcaccg cgatgccaac acaaagagaa gaatcaaaac aatttccatt 24240 ttcccatttt ttcaattctt agcaaaagga gattagcaag tctttacgaa agttgaaaaa 24300 aaaaattcca aatccaaaaa aaaaaataaa taaaaagttc caaaagctat taaaaactct 24360 ttttcctctt ttcttttttt tttcttttca tcttcttttt tcttttctcc tttcaaccac 24420 cactcctttt acatagttcc ttggacctat ttttcctcga ttttatagaa acatttgtgg 24480 ttgtgtgaat ttcgtccatt tcggtgccta tttcctatcc tttcttccat atccctcctc 24540 tctccaccaa aagtcctact actaccacca caaaactact tcttctgtta ctctccaatt 24600 agttgttact caactttagt tttaggtttt gcatttgtat tagtggaggt gtcttttact 24660 agcaactcgg ccaaagcaat taatttatgt cgtgattttt gaagtggcta tttaaaaact 24720 ttaactattt ttgtagtttt tttaatatta ttttaagttt caggtaatct tcagtaatca 24780 gtggtttgtg ctatttgggc attttacatt tgatgaattt ttatttgatt ttcaagtttg 24840 ttatgttttt ataaaggtaa tataacttaa gtttcctgtc aatcctgtgg ctagctactt 24900 cttacgtgga ttctcaagac cagggagtag ctaatttctt ttcagaaata catgatttgt 24960 atagcaggca gcaatatgga caagctttag aagccctgtt ggttagagca ccttggatcc 25020 atggaaatac aagttcacca cttgaacgac tctctgataa attagatata ctatcaaatt 25080 ccggtgagca agactcaatt gtttctttgg cggaatacct tgaatcaagt caagatgatg 25140 ctgaagtgta tgcaacattc gtacgacaat acataagtag tcatgcaagt cttagtagtg 25200 aggtcaatac acagctcaat actatgaatt taattcaggg ttattatcag actgtaagac 25260 cggagcaact gctatcacca atcaaggaac aggacgctta gacgctagtt agagagtgca 25320 ttggaaaaca tgtggataaa gaaactcctt tgtaagagtt gagtgcaact ttattttatc 25380 aatgatttta tttattaatt caagtctcgt tagtttgttg tgcaaattac agcactgttt 25440 ctaaaattca caagaaaata tcaatttagt atattactga gtaatagcgt tacgataaaa 25500 acgaaacact gtgtgtaaat tttgtctata aggactttat tttataggtg tcactgtgca 25560 aaaaactttt agtagcagtt gattcatttc ctcgtgatta gaaaaataaa atatgatacg 25620 tgtaaaaaaa tctataacag ctataataga aagaaaagga ggggaaatta taattagaaa 25680 tgagtagaga aagaagaaag agtctggtta ttgtaagata cctaagaact gaaacctaac 25740 gaaaaaagaa aagttgcatg taaagtcatt aaagaataaa acaaaccaga agttatgatc 25800 ggtgataaca aattagaaga ctgataaatt tggatattgt ttcttgggtt attaacgatt 25860 atattgcaat agattagtga gacgatgata ggggttatta aatgctttag gattatggga 25920 tttatcaaat aaaaaaacgg tgcatgaaaa aatttattca gatgattatt attaagagat 25980 aggactttta aaaaacgtta ttaaggactg gttttatttg atgtatctcg agcattagaa 26040 atctaaaaat tcggcacaca agcataaaca taaaaaatca tattcatcgt acaaaatttt 26100 tgattgtcat attcaaccgt tgattttctg ttatcaattt gagaagttgt gagcaaagta 26160 gataaaaaat gtccttcaag atacattggt tttcattaca gttatttttt ataacataaa 26220 gattttaata tcattgcgct tactatggcc tcgatttatt gacaaaacat tccgagtcga 26280 ctttgcagta tagcaacgta tcaatgtttt tgacaatgaa cgataattaa aattacctta 26340 gttatcagct acgcagtttg gtatatgttt aacaataaat ttattgcaat gagtttctat 26400 tgcgatatac taagtgtgtt taaacaatag tgttatattt attgttaaaa aaatccaata 26460 gtatcagtaa ccgatctaga actaagctga gaaacgagct tcagctttac ttctatctac 26520 gttattctaa ttactacata ttttaataag ttatcattca attctatctc aatatcatat 26580 catctatggt acaatgtgta aatagaacat gcgacatata gtgatatgca acgcagtgta 26640 ttatcgctaa caactgttac accgtgtagg aagtacgtat aattcagggg tccacaatgt 26700 gatagaagct cgttcttctt aagcgtttcc acaattaccc gtttaacttt gccaaccttg 26760 cagcaacggt ttgccgattt ttttcatcag aaactaaatc caagcacaag aacagttatg 26820 agcacttctt tggatgtcgc cactcgaact tcacacttgc tcatgttctg atttactgag 26880 gcatggatta tgtctccact aaatgactta tatcataaga attcataata aaattaaaat 26940 tcagaataag gatcaaaagg ttttaacccc attgcttatt agcacaccta actattgtat 27000 gattgaccgc caatgtaaaa atggcattta agttgaattg tagtatttct atccttatta 27060 tttcactttc cttcttctct cttgtttcca ctttattaat caaaagtcaa attaattagg 27120 ccgggtttct ttgtgttcgt tgcataagat agttgagctc aaaaaaatag ttccttttct 27180 tttttcaaat cacgatattt tagagcaaaa aatatcgcat cttatctgta ggctcataat 27240 gctgtttcgc tctttcggtt acaattagta tgtgtatttc aaaagtacca cttttaccaa 27300 ctattacata actacgcacg aatacaaaaa atatggatca tattttacat aattaccacc 27360 tatcgaaatg tgaacaagtt catagggcaa atatccgtat taatttggat ttattattta 27420 gtacatgttg tggaattcgt taaatattat tacttttttt gcaataagct aaccgattta 27480 cgaaattctg gcccatttta atttcatgct ttgcacagtt attagttaac tatctgatgc 27540 atcaactatg tacaatttcc ttacggtcta cagtatcatt atgcgcaaga ttggtgtacc 27600 aggtatgtta cgaacaaaca aggaattgga ttaaaagtgt gttagcacac atgaatatct 27660 tttcaaattt tatattctca ttgagctcac ttactactaa aagggtaaat ataatagtat 27720 cataatgaaa gtgaaagtat cgttatcaca tcatggacgt ctttagactt tgtcatgaaa 27780 aaggagaagt gttgattggt ctttaaaagg ttcatttttc tttttcaatt tcattagact 27840 ctatgcaggg atctgaaaaa acctagtcat atatttgttt tcacaaaacc aacaaataaa 27900 aaattatagg aagctgtatg ccaaaacgga tgaatttctt gaacgaaata aaatataaat 27960 tgtaaaatat tagttacaaa aaaaatttat acttcggtga aaaaaatccg gttagcttat 28020 tagagtagtg atcgtcttct gtattgtcag ctgcaggcac taaccagacc ttcatctcat 28080 atagtccaca aagatattcc gctaaataaa gttatatcta tcgcaaggaa agctatctgt 28140 acaataaata ttagcaagta acatttatgg taaaaaaatt gggatttgtt agttgttgaa 28200 tacaatttgt aaaatagtca accttttcgc ggacaagata aattgctctt aattgcaaat 28260 atacgtcttt cactatataa gctttacgat agaagggatc aattgacatc taattatata 28320 aagcatcaat ttcattaaaa aacgtttatt aacaccgaaa cataaaacat caaagcgaaa 28380 atatacaata aaatatcaaa gtatcaataa aaaacgaaga gaaagcaaga tatttgaaca 28440 aaaacataaa ttcaatggaa ctgatgaaat tcatattcag tactcgcttt tgaccataag 28500 cctactgcat cacgaagtcg ctttttcaac ttaatagttt cagcaggact aaacattata 28560 ccatatccct taagatattg gacacactgt tcctttgata attcatcaat gtcttcgact 28620 ctttctatcg gcggtaatcc actattagcc ggctcattac cattcagaaa tggcactggt 28680 tatgccaaat aaccttggtc tgaacgagtt gtattttcaa gctttcttgt caacatgatc 28740 gacctacatg agcgagcatc aattgtttcc attttctgat ccattgagtc aagtcgctgc 28800 tccatagaat caaatcttcg gtctatggaa ttaaatcgtt ggtctataga attaaatcgc 28860 tgctctattg actgaaacct tgcttcagtt ttttgctcga gtaaatcaat tctagtgttc 28920 aaacggatcg tttccctttt catttcaacc atttcaactt tcatttcggc catttcgcct 28980 ttcatagatg tcatctcatt ctgtacagtg tcaaaccgag aattcatctc attctgcata 29040 gcgtcaaacc gagaattcat gtcattttgc attgagtcca ttttagaaaa tattcgttcg 29100 aaaattccac ctagtttagt gtttgcccat tcatctatcc agcgtggaaa ttgtacttct 29160 cccgattgtt cttcagaaat ttccctttca atcgctaact ttttccatcc ttgtagcctt 29220 tcattgcatt caatttcata tttcatttta cgatctcgtt cctcaatata tttttcaagt 29280 gcttctcttt tgttttcgtc aatttctaac aatgtagaat ctacagatct ctcgtatctt 29340 ttaatgaaaa tttttaaatc ttccgcagaa tcatttggtg gtggcagatt gtagtcatta 29400 tcaaaattct cgttcgacat catccttatt atttatacaa aaccagttgc aataaaccgc 29460 agtattcttt ttaacgataa aattgcaatt cactataact atacaaatga tatcttttgt 29520 agcctgcctt atatgtttac taattgacaa atatttctca gaaagggaaa tcttggaaaa 29580 taaaagtaca aacgtgtgtt gaaagcaata tttaatatat gtgttgtaag taaattcaaa 29640 tctctcaagt tccccttata tacaacttta aacaaagaat gctaaggaca aagaaaagag 29700 tttttgatgg attaagaaac aaggtaacct aagtaacttc acattgggag tacgtgatac 29760 agataatgaa aatgggcttt atctgtaaaa taaaagaaaa atggcttatt tgcaggtaac 29820 ttattacaaa gttagattta ttgaatagag gagtacatgt ataaaagcaa acatggccaa 29880 caatgttgat acaaaaaatt tcgttagcct ggattacttt attcgtttca aaggctgctt 29940 aacagcttgt agcaatcata aggtgtttta atcaaaagca cattactcat tcaagctaga 30000 taatttgtag attgtataag cggtagctac aatatatgct caagggatat aaactggtta 30060 ttgaaatagc ctctgcaaat taatgaaaga aacaaagctt aatagaatac ccccaattat 30120 tttaagacga aagagttttt tcacgttcct gaaacaatgt gtttaagaaa ctctcaagca 30180 agtatacttt cattgaaata tacctctgct gttaaatagt tactatgagc aaatataata 30240 ggtaaactgc acaaagcaaa tacgtaaaaa ctcctacata atacttgata tgtacaattg 30300 tcatttagct tgaaaatgct agatagaata gaaacgcctc taaagaaaac tatatttaaa 30360 taaattgaat aaaaaataaa atggcaaatt tgcccattta cgtaatgtta cacattgata 30420 tccaaaagga acttttatcg tacataaaca caatttattt aatttggaaa gattgagttt 30480 tgtatattct tgactaacta ttggtctaag ttgacattta tttaacccat atttattatc 30540 caattactcg cttcgttttt acaagtactg acatctctta atcctgccta taccatttat 30600 cctgtgtatt attcactcat ttaaaattaa gattattcta atcatctcaa atcgggcgat 30660 ctcatctggt ttgtgagtcg gactagttca acttcataga ccactaagct ctaaacatga 30720 tctcaaataa agtcaccatt tactaccctg agataaaatt gctggtgact tcattcgtag 30780 gtatcatcaa tgacaatatc tataaatgga aatacgctat ataccttgcg ttgcctaaat 30840 agctgagtac aacctgttgg acgacttctc ttgcagtagt ccgtaaactt ggaattgact 30900 ccagctcctt taactttgca gctccattgc attgtctgtt cggaaccagc acagtgtcct 30960 tcacatctct ctactagaca acctaaactt agaaagcttt gacctcctac tatgcaactc 31020 catgaaactc cgtagttgtt gtcacaaacc aacttgcttg actatcatcg acatatttgt 31080 attgaacatt gtacagatgt gctatcaaca caccacaaga agcaagagac acggtttgtc 31140 tcttattcgc cccttgtaca ttgcaaaagc taatgtccaa atccttaatc gatatacctg 31200 gttgaaggat tgatattttc aggtccttca taaacactgt caccaaatat ataacaatca 31260 gtggtatact gacctgttag aagttgacat aagtaagcat cggtatcagt gtttgtttct 31320 gtaatgctat ttaataagta gttgtaagct tcaattcgta catcagctgt atcaaatagc 31380 atcagtccat gttggtcaat taaattagca agtaattctg catagttggg aggcagctta 31440 gcatagtcaa caaaagtcaa attcacctca gctaagacaa gttttatgaa tacacaacaa 31500 atacaaaaca gcaataacat ataagatctg tcaggttcta atgttatatc tttctccgtt 31560 tagcttataa aactaaccga aaaaaagtgt atatatactg agttctacct ttaaattaat 31620 ttttgtagtt gaacaatatt aacggtttga aatgatatat tacatgataa ttgtcccatg 31680 cgactaactc ggttgttgcc gggggcattt gatgtatgag gagtcagtgt tagctacgcg 31740 gtttggtatc tgtttaacat acttagaacc gcggtgagtt ttccttgtga tctattatat 31800 tgcaatacac aggtactata tgtagcaact tgatattggt aaacaccagc gcatcttatt 31860 gtatcgtctt tctaaaacca aactgcgtag aggaagaaca ctgcctcagc acctttcgtt 31920 aaaatcatag gagcgctttt ttaaccgact tggaattagt tggaatatgt tcaaagcaat 31980 aatctttgat cttttcctgt taaacgaaag gaaaaaaatt tcaacaatga gtcaaattct 32040 tagcaaaaag cagttttgag tgataatata attcctttca atgttttgtt tatttttgta 32100 tacccatggg atgaaggtta agaaacacca gacaactgaa gataaagtta aaaacttatt 32160 tttattttat tttaacttta tctttagaaa attgacatag gtgagtacag gttagaataa 32220 gtttcttata tttccaaact ggaattattt aatgcaaaca tataatgcag ttatctattt 32280 atctaaacat ctgcgccact agacattttc attgttctta cttattaaag gccctatttt 32340 tgttttcttt tctttgttta cctcttttgg tcctttgcat gctttgtttt cattgtagat 32400 aatgagggtt ccaaaggctt tgaaaattat atatatattt atacataaac tggtgtaact 32460 ttgtaattgt atttttatct ggtgttcttg atcctggata catattgaac aacacgttta 32520 aaacactcta ccaactttta ataaacagcg ttaacattta ctagaacaac acactatatc 32580 tttctaaaaa atgactacgc tcattattga ttaaaaatcg acgtcaaacg agaattttga 32640 aaatggtttc gacttacctc caccagatga ttcagcagaa gacttgcaac cgtttatcaa 32700 gaaattcgaa agatctctaa attctgcttt actagaattc ggtgagaata atcaggaaac 32760 gattgaaaaa ttttcgtcaa gcaaaggaac attaaataga tttgaaactg aatgtgatca 32820 aaagttgcga aattggaaga gattggcgat agaaagggaa gttccggagg aaccattggg 32880 agaattacag tttccacgct ggatagacga atgggcaaat actaaactag gaggaatttt 32940 cgagcgaata ttttctaaaa taactcaacg cagaatgaca tgaattctag gtttgacgct 33000 atgtacaatg agatgactgt catgaaaaat gacattgctt ccatcaaagg taaagcaact 33060 acttttaaga acgaattaac tgccatcaaa ggttctatat ctcaattaga tagaaaaatc 33120 gatcttttgg atcaaaaaac tgaagaaaga tttaataata tggctcaaac gatgcaaaaa 33180 attgatgatc gttcttgcaa gtcgatgatg ctaacaaaaa aatatgaaaa tatggtccgt 33240 tcaaatatgc attattcggc tgttccagta ccattcctta acggagatga acctagagac 33300 tatgaactcc caccgcttgc aagcttcgaa gacattgata atttgacaag ggaacagtgt